Tags:
metabolism, bioinformatics, modeling
Owner:
david.sherman@inria.fr
Mimoza combines the model generalization method with the zooming user interface (ZUI) paradigm and allows a human expert to explore metabolic network models in a semantically zoomable manner.
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Mimoza is a a Python library for metabolic model visualization and navigation that allows you to explore your metabolic models in a semantically zoomable manner.
Mimoza combines the model generalization method with the zooming user interface (ZUI) paradigm and allows a human expert to explore metabolic network models in a semantically zoomable manner.
Mimoza takes a metabolic model in SBML format, generalizes it to detect similar metabolites and similar reactions, and automatically creates a 3-level zoomable map:
Mimoza highlights the general model structure and the divergences from it, such as alternative paths or missing reactions, and allows a user to analyse it in a top-down manner.
The network map can be browsed online or downloaded as a COMBINE archive, containing:
Zhukova, A., Sherman, D. J. (2015) Mimoza: Web-Based Semantic Zooming and Navigation in Metabolic Networks BMC Systems Biology, 9:10 doi:10.1186/s12918-015-0151-5
Execute:
bash
python3 ./mimoza.py --model path_to_your_model.xml --verbose
This will produce a COMBINE archive, containing:
In input :
<?xml version="1.0" encoding="UTF-8"?> <sbml xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/" xmlns="http://www.sbml.org/sbml/level3/version1/core" xmlns:groups="http://www.sbml.org/sbml/level3/version1/groups/version1" xmlns:layout="http://www.sbml.org/sbml/level3/version1/layout/version1" level="3" version="1"> <model metaid="meta_ymn" id="ymn" substanceUnits="dimensionless" timeUnits="dimensionless" volumeUnits="dimensionless"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>This SBML representation of the yeast metabolic network is made available under the Creative Commons Attribution-Share Alike 3.0 Unported Licence (see www.creativecommons.org).</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_ymn"> <dc:creator> <rdf:Bag> <rdf:li rdf:parseType="Resource"> <vCard:N rdf:parseType="Resource"> <vCard:Family>Smallbone</vCard:Family> <vCard:Given>Kieran</vCard:Given> </vCard:N> <vCard:EMAIL>kieran.smallbone@manchester.ac.uk</vCard:EMAIL> <vCard:ORG rdf:parseType="Resource"> <vCard:Orgname>University of Manchester</vCard:Orgname> </vCard:ORG> </rdf:li> <rdf:li rdf:parseType="Resource"> <vCard:N rdf:parseType="Resource"> <vCard:Family>Heavner</vCard:Family> <vCard:Given>Ben</vCard:Given> </vCard:N> <vCard:EMAIL>bheavner@systemsbiology.org</vCard:EMAIL> <vCard:ORG rdf:parseType="Resource"> <vCard:Orgname>Institute for Systems Biology</vCard:Orgname> </vCard:ORG> </rdf:li> <rdf:li rdf:parseType="Resource"> <vCard:N rdf:parseType="Resource"> <vCard:Family>Herrgard</vCard:Family> <vCard:Given>Markus</vCard:Given> </vCard:N> <vCard:EMAIL>mherrgar@ucsd.edu</vCard:EMAIL> <vCard:ORG rdf:parseType="Resource"> <vCard:Orgname>University of California, San Diego</vCard:Orgname> </vCard:ORG> </rdf:li> <rdf:li rdf:parseType="Resource"> <vCard:N rdf:parseType="Resource"> <vCard:Family>Swainston</vCard:Family> <vCard:Given>Neil</vCard:Given> </vCard:N> <vCard:EMAIL>neil.swainston@manchester.ac.uk</vCard:EMAIL> <vCard:ORG rdf:parseType="Resource"> <vCard:Orgname>University of Manchester</vCard:Orgname> </vCard:ORG> </rdf:li> <rdf:li rdf:parseType="Resource"> <vCard:N rdf:parseType="Resource"> <vCard:Family>Aung</vCard:Family> <vCard:Given>Hnin</vCard:Given> </vCard:N> <vCard:EMAIL>hwa22@cornell.edu</vCard:EMAIL> <vCard:ORG rdf:parseType="Resource"> <vCard:Orgname>Cornell University</vCard:Orgname> </vCard:ORG> </rdf:li> </rdf:Bag> </dc:creator> <dcterms:created rdf:parseType="Resource"> <dcterms:W3CDTF>2008-02-20T10:05:10Z</dcterms:W3CDTF> </dcterms:created> <dcterms:modified rdf:parseType="Resource"> <dcterms:W3CDTF>2013-04-18T22:10:36Z</dcterms:W3CDTF> </dcterms:modified> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/taxonomy/559292"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfCompartments> <compartment metaid="meta_c_02" sboTerm="SBO:0000290" id="c_02" name="cell envelope" spatialDimensions="3" size="1" constant="true"> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_c_02"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/obo.go/GO:0030313"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </compartment> <compartment metaid="meta_c_03" sboTerm="SBO:0000290" id="c_03" name="cytoplasm" spatialDimensions="3" size="1" constant="true"> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_c_03"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/obo.go/GO:0005737"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </compartment> <compartment metaid="meta_c_04" sboTerm="SBO:0000290" id="c_04" name="endoplasmic reticulum" spatialDimensions="3" size="1" constant="true"> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_c_04"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/obo.go/GO:0005783"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </compartment> <compartment metaid="meta_c_05" sboTerm="SBO:0000290" id="c_05" name="endoplasmic reticulum membrane" spatialDimensions="3" size="1" constant="true"> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_c_05"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/obo.go/GO:0005789"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </compartment> <compartment metaid="meta_c_06" sboTerm="SBO:0000290" id="c_06" name="extracellular" spatialDimensions="3" size="1" constant="true"> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_c_06"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/obo.go/GO:0005576"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </compartment> <compartment metaid="meta_c_07" sboTerm="SBO:0000290" id="c_07" name="Golgi" spatialDimensions="3" size="1" constant="true"> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_c_07"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/obo.go/GO:0005794"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </compartment> <compartment metaid="meta_c_08" sboTerm="SBO:0000290" id="c_08" name="Golgi membrane" spatialDimensions="3" size="1" constant="true"> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_c_08"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/obo.go/GO:0000139"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </compartment> <compartment metaid="meta_c_09" sboTerm="SBO:0000290" id="c_09" name="lipid particle" spatialDimensions="3" size="1" constant="true"> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_c_09"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/obo.go/GO:0005811"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </compartment> <compartment metaid="meta_c_10" sboTerm="SBO:0000290" id="c_10" name="mitochondrial membrane" spatialDimensions="3" size="1" constant="true"> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_c_10"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/obo.go/GO:0031966"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </compartment> <compartment metaid="meta_c_11" sboTerm="SBO:0000290" id="c_11" name="mitochondrion" spatialDimensions="3" size="1" constant="true"> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_c_11"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/obo.go/GO:0005739"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </compartment> <compartment metaid="meta_c_13" sboTerm="SBO:0000290" id="c_13" name="nucleus" spatialDimensions="3" size="1" constant="true"> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_c_13"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/obo.go/GO:0005634"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </compartment> <compartment metaid="meta_c_14" sboTerm="SBO:0000290" id="c_14" name="peroxisomal membrane" spatialDimensions="3" size="1" constant="true"> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_c_14"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/obo.go/GO:0005778"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </compartment> <compartment metaid="meta_c_15" sboTerm="SBO:0000290" id="c_15" name="peroxisome" spatialDimensions="3" size="1" constant="true"> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_c_15"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/obo.go/GO:0005777"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </compartment> <compartment metaid="meta_c_16" sboTerm="SBO:0000290" id="c_16" name="vacuolar membrane" spatialDimensions="3" size="1" constant="true"> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_c_16"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/obo.go/GO:0009705"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </compartment> <compartment metaid="meta_c_17" sboTerm="SBO:0000290" id="c_17" name="vacuole" spatialDimensions="3" size="1" constant="true"> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_c_17"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/obo.go/GO:0005773"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </compartment> </listOfCompartments> <listOfSpecies> <species metaid="meta_s_0001" sboTerm="SBO:0000247" id="s_0001" name="(1->3)-beta-D-glucan [cell envelope]" compartment="c_02" initialConcentration="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_s_0001"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:37671"/> <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00965"/> <rdf:li rdf:resource="http://identifiers.org/obo.chebi/chebi:37671"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </species> <species metaid="meta_s_0003" sboTerm="SBO:0000247" id="s_0003" name="(1->3)-beta-D-glucan [extracellular]" compartment="c_06" initialConcentration="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_s_0003"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:37671"/> <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C00965"/> <rdf:li rdf:resource="http://identifiers.org/obo.chebi/chebi:37671"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </species> <species metaid="meta_s_0004" sboTerm="SBO:0000247" id="s_0004" name="(1->6)-beta-D-glucan [cell envelope]" compartment="c_02" initialConcentration="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_s_0004"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:27380"/> <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C02493"/> <rdf:li rdf:resource="http://identifiers.org/obo.chebi/chebi:27380"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </species> <species metaid="meta_s_0006" sboTerm="SBO:0000247" id="s_0006" name="(2-amino-4-hydroxy-7,8-dihydropteridin-6-yl)methyl trihydrogen diphosphate [mitochondrion]" compartment="c_11" initialConcentration="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_s_0006"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:57602"/> <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C04807"/> <rdf:li rdf:resource="http://identifiers.org/obo.chebi/chebi:57602"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </species> <species metaid="meta_s_0007" sboTerm="SBO:0000247" id="s_0007" name="(2E)-3-(methoxycarbonyl)pent-2-enedioic acid [cytoplasm]" compartment="c_03" initialConcentration="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_s_0007"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:57470"/> <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C11514"/> <rdf:li rdf:resource="http://identifiers.org/obo.chebi/chebi:57470"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </species> <species metaid="meta_s_0008" sboTerm="SBO:0000247" id="s_0008" name="(2R,3R)-2,3-dihydroxy-3-methylpentanoate [mitochondrion]" compartment="c_11" initialConcentration="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_s_0008"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:49258"/> <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C06007"/> <rdf:li rdf:resource="http://identifiers.org/obo.chebi/chebi:49258"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </species> <species metaid="meta_s_0009" sboTerm="SBO:0000247" id="s_0009" name="(2R,3S)-3-isopropylmalate [cytoplasm]" compartment="c_03" initialConcentration="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_s_0009"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:35121"/> <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C04411"/> <rdf:li rdf:resource="http://identifiers.org/obo.chebi/chebi:35121"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </species> <species metaid="meta_s_0010" sboTerm="SBO:0000247" id="s_0010" name="(2S)-2-isopropyl-3-oxosuccinate [cytoplasm]" compartment="c_03" initialConcentration="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_s_0010"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17214"/> <rdf:li rdf:resource="http://identifiers.org/kegg.compound/C04236"/> <rdf:li rdf:resource="http://identifiers.org/obo.chebi/chebi:17214"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> </species> <species metaid="meta_s_0011" sboTerm="SBO:0000247" id="s_0011" name="(2S)-2-isopropyl-3-oxosuccinate [mitochondrion]" compartment="c_11" initialConcentration="0" hasOnlySubstanceUnits="false" boundaryCondition="false" constant="false"> <annotation> <rdf:RDF xmlns:rdf="http://www.w3.org/1999/02/22-rdf-syntax-ns#" xmlns:dc="http://purl.org/dc/elements/1.1/" xmlns:dcterms="http://purl.org/dc/terms/" xmlns:vCard="http://www.w3.org/2001/vcard-rdf/3.0#" xmlns:bqbiol="http://biomodels.net/biology-qualifiers/" xmlns:bqmodel="http://biomodels.net/model-qualifiers/"> <rdf:Description rdf:about="#meta_s_0011"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/chebi/CHEBI:17214"/> <rdf:li 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rdf:resource="http://identifiers.org/kegg.reaction/R00196"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0063" stoichiometry="1" constant="true"/> <speciesReference species="s_0709" stoichiometry="2" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0710" stoichiometry="2" constant="true"/> <speciesReference species="s_1399" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0704"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0531"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0255"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0005" sboTerm="SBO:0000176" id="r_0005" name="1,3-beta-glucan synthase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YGR032W OR YLR342W)</p> </body> </notes> <annotation> <rdf:RDF> 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<notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YGR143W OR YPR159W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0006"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/8321211"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_1543" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0004" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1538" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0973"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0379"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0007" sboTerm="SBO:0000176" id="r_0007" name="1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino)imidazole-4-carboxamide isomerase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YIL020C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0007"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R04640"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0077" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0312" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0465"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0012" sboTerm="SBO:0000176" id="r_0012" name="1-pyrroline-5-carboxylate dehydrogenase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YHR037W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0012"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/387737"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0119" stoichiometry="1" constant="true"/> <speciesReference species="s_0807" stoichiometry="2" constant="true"/> <speciesReference species="s_1200" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0799" stoichiometry="1" constant="true"/> <speciesReference species="s_0993" stoichiometry="1" constant="true"/> <speciesReference species="s_1205" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0431"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0013" sboTerm="SBO:0000176" id="r_0013" name="2,3-diketo-5-methylthio-1-phosphopentane degradation reaction" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YMR009W AND YEL038W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0013"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/14506228"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0311" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="3" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0294" stoichiometry="1" constant="true"/> <speciesReference species="s_0722" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="6" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0721"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0254"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0014" sboTerm="SBO:0000176" id="r_0014" name="2,5-diamino-6-ribitylamino-4(3H)-pyrimidinone 5'-phosphate deaminase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YOL066C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0014"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/9068650"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0142" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0313" stoichiometry="1" constant="true"/> <speciesReference species="s_0419" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0832"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0015" sboTerm="SBO:0000176" id="r_0015" name="2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate reductase (NADPH)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YBR153W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0015"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R09376"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/9068650"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0141" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1212" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0142" stoichiometry="1" constant="true"/> <speciesReference species="s_1207" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0071"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0016" sboTerm="SBO:0000176" id="r_0016" name="2-aceto-2-hydroxybutanoate synthase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YMR108W OR (YCL009C AND YMR108W))</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0016"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R08648"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/8972574"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0179" stoichiometry="1" constant="true"/> <speciesReference species="s_0799" stoichiometry="1" constant="true"/> <speciesReference species="s_1401" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0039" stoichiometry="1" constant="true"/> <speciesReference species="s_0460" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0734"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0100"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0017" sboTerm="SBO:0000176" id="r_0017" name="2-amino-4-hydroxy-6-hydroxymethyldihydropteridine diphosphokinase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YNL256W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0017"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03503"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0148" stoichiometry="1" constant="true"/> <speciesReference species="s_0437" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0006" stoichiometry="1" constant="true"/> <speciesReference species="s_0424" stoichiometry="1" constant="true"/> <speciesReference species="s_0799" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0794"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0018" sboTerm="SBO:0000176" id="r_0018" name="2-aminoadipate transaminase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YER152C OR YGL202W OR YJL060W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0018"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01939"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/10714900"/> <rdf:li rdf:resource="http://identifiers.org/pubmed/19342587"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0176" stoichiometry="1" constant="true"/> <speciesReference species="s_0991" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0180" stoichiometry="1" constant="true"/> <speciesReference species="s_0953" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0348"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0496"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0980"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0019" sboTerm="SBO:0000176" id="r_0019" name="2-dehydropantoate 2-reductase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YHR063C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0019"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02472"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0149" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1212" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0030" stoichiometry="1" constant="true"/> <speciesReference species="s_1207" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0437"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0020" sboTerm="SBO:0000176" id="r_0020" name="2-deoxy-D-arabino-heptulosonate 7-phosphate synthetase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDR035W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0020"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01826"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0552" stoichiometry="1" constant="true"/> <speciesReference species="s_0807" stoichiometry="1" constant="true"/> <speciesReference species="s_1361" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0350" stoichiometry="1" constant="true"/> <speciesReference species="s_1326" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0170"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0021" sboTerm="SBO:0000176" id="r_0021" name="2-hexaprenyl-6-methoxy-1,4-benzoquinone methyltransferase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YOR125C AND YOL096C AND YML110C AND YGL119W AND YGR255C AND YDR204W AND YLR201C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0021"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R04983"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/15792955"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0155" stoichiometry="1" constant="true"/> <speciesReference species="s_1419" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0156" stoichiometry="1" constant="true"/> <speciesReference species="s_0799" stoichiometry="1" constant="true"/> <speciesReference species="s_1415" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0858"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0835"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0713"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0339"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0406"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0191"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0660"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0022" sboTerm="SBO:0000176" id="r_0022" name="2-hexaprenyl-6-methoxyphenol monooxygenase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YOR125C AND YOL096C AND YML110C AND YGL119W AND YGR255C AND YDR204W AND YLR201C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0022"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R04982"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/15792955"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0157" stoichiometry="1" constant="true"/> <speciesReference species="s_1278" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0155" stoichiometry="1" constant="true"/> <speciesReference species="s_0807" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0858"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0835"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0713"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0339"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0406"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0191"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0660"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0023" sboTerm="SBO:0000176" id="r_0023" name="2-isopropylmalate hydratase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YGL009C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0023"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03968"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/3071717"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0165" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0162" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0328"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0024" sboTerm="SBO:0000176" id="r_0024" name="2-isopropylmalate synthase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YOR108W OR YNL104C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0024"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01213"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/6090272"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0232" stoichiometry="1" constant="true"/> <speciesReference species="s_0373" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0162" stoichiometry="1" constant="true"/> <speciesReference species="s_0529" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0778"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0855"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0025" sboTerm="SBO:0000176" id="r_0025" name="2-isopropylmalate synthase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YNL104C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0025"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01213"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/6090272"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0233" stoichiometry="1" constant="true"/> <speciesReference species="s_0376" stoichiometry="1" constant="true"/> <speciesReference species="s_0807" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0164" stoichiometry="1" constant="true"/> <speciesReference species="s_0532" stoichiometry="1" constant="true"/> <speciesReference species="s_0799" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0779"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0026" sboTerm="SBO:0000176" id="r_0026" name="2-keto-4-methylthiobutyrate transamination" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0026"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R07396"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/14506228"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0294" stoichiometry="1" constant="true"/> <speciesReference species="s_0991" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0180" stoichiometry="1" constant="true"/> <speciesReference species="s_1029" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="meta_r_0027" sboTerm="SBO:0000176" id="r_0027" name="2-methylcitrate dehydratase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDR234W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0027"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03444"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/5908136"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0834" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0454" stoichiometry="1" constant="true"/> <speciesReference species="s_0807" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0196"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0028" sboTerm="SBO:0000176" id="r_0028" name="2-methylcitrate synthase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YPR001W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0028"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00931"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/16332871"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0807" stoichiometry="1" constant="true"/> <speciesReference species="s_1273" stoichiometry="1" constant="true"/> <speciesReference species="s_1382" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0174" stoichiometry="1" constant="true"/> <speciesReference species="s_0532" stoichiometry="1" constant="true"/> <speciesReference species="s_0799" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0947"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0029" sboTerm="SBO:0000176" id="r_0029" name="2-oxo-4-methyl-3-carboxypentanoate decarboxylation" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YJR148W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0029"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01652"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0010" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0291" stoichiometry="1" constant="true"/> <speciesReference species="s_0456" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0550"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0030" sboTerm="SBO:0000176" id="r_0030" name="2-oxo-4-methyl-3-carboxypentanoate decarboxylation" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YHR208W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0030"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01652"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0011" stoichiometry="1" constant="true"/> <speciesReference species="s_0799" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0292" stoichiometry="1" constant="true"/> <speciesReference species="s_0460" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0457"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0032" sboTerm="SBO:0000176" id="r_0032" name="3',5'-bisphosphate nucleotidase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YOL064C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0032"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00188"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/7809627"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0390" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0423" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0830"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0033" sboTerm="SBO:0000176" id="r_0033" name="3',5'-cyclic-nucleotide phosphodiesterase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YGL248W OR YOR360C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0033"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00191"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0192" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0423" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0897"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0354"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000176" id="r_0034" name="3',5'-cyclic-nucleotide phosphodiesterase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YOR360C</p> </body> </notes> <listOfReactants> <speciesReference species="s_0194" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0584" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0897"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000176" id="r_0035" name="3',5'-cyclic-nucleotide phosphodiesterase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YOR360C</p> </body> </notes> <listOfReactants> <speciesReference species="s_0196" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_0849" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0897"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0036" sboTerm="SBO:0000176" id="r_0036" name="3',5'-cyclic-nucleotide phosphodiesterase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YOR360C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0036"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01234"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0195" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0782" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0897"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000176" id="r_0037" name="3',5'-cyclic-nucleotide phosphodiesterase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YOR360C</p> </body> </notes> <listOfReactants> <speciesReference species="s_0193" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0526" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0897"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0038" sboTerm="SBO:0000176" id="r_0038" name="3,4-dihydroxy-2-butanone-4-phosphate synthase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDR487C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0038"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R07281"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/12595523"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0577" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0158" stoichiometry="1" constant="true"/> <speciesReference species="s_0722" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0237"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0039" sboTerm="SBO:0000176" id="r_0039" name="3-dehydroquinate dehydratase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDR127W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0039"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03084"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0210" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0211" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0182"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0040" sboTerm="SBO:0000176" id="r_0040" name="3-dehydroquinate synthase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDR127W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0040"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03083"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/6355828"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0349" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0210" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0182"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0041" sboTerm="SBO:0000176" id="r_0041" name="3-dehydrosphinganine reductase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YBR265W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0041"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02978"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/18296751"/> <rdf:li rdf:resource="http://identifiers.org/pubmed/9804843"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0231" stoichiometry="1" constant="true"/> <speciesReference species="s_0795" stoichiometry="2" constant="true"/> <speciesReference species="s_1213" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1208" stoichiometry="1" constant="true"/> <speciesReference species="s_1445" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0092"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0042" sboTerm="SBO:0000176" id="r_0042" name="3-deoxy-D-arabino-heptulosonate 7-phosphate synthetase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YDR035W OR YBR249C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0042"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01826"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/2880280"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0551" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> <speciesReference species="s_1360" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0349" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0088"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0169"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0043" sboTerm="SBO:0000176" id="r_0043" name="3-hexaprenyl-4,5-dihydroxybenzoate hydroxylase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0043"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R06865"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/15792955"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0215" stoichiometry="1" constant="true"/> <speciesReference species="s_1275" stoichiometry="0.5" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0212" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="meta_r_0044" sboTerm="SBO:0000176" id="r_0044" name="3-hexaprenyl-4-hydroxy-5-methoxybenzoate decarboxylase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0044"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R06866"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/15792955"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0214" stoichiometry="1" constant="true"/> <speciesReference species="s_0799" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0157" stoichiometry="1" constant="true"/> <speciesReference species="s_0460" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="meta_r_0045" sboTerm="SBO:0000176" id="r_0045" name="3-hydroxy-L-kynurenine hydrolase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YLR231C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0045"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02668"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0222" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0224" stoichiometry="1" constant="true"/> <speciesReference species="s_0955" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0663"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0057" sboTerm="SBO:0000176" id="r_0057" name="3-hydroxyacyl-CoA dehydrogenase (3-oxotetradecanoyl-CoA)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YKR009C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0057"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R04739"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0054" stoichiometry="1" constant="true"/> <speciesReference species="s_1202" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0257" stoichiometry="1" constant="true"/> <speciesReference species="s_0801" stoichiometry="1" constant="true"/> <speciesReference species="s_1206" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0598"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0058" sboTerm="SBO:0000176" id="r_0058" name="3-hydroxyanthranilate 3,4-dioxygenase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YJR025C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0058"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/9539135"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0224" stoichiometry="1" constant="true"/> <speciesReference species="s_1275" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0147" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0530"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0059" sboTerm="SBO:0000176" id="r_0059" name="3-isopropylmalate 3-methyltransferase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YER175C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0059"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/15147181"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0009" stoichiometry="1" constant="true"/> <speciesReference species="s_1416" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0217" stoichiometry="1" constant="true"/> <speciesReference species="s_1413" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0305"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0060" sboTerm="SBO:0000176" id="r_0060" name="3-isopropylmalate dehydratase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YGL009C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0060"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R04001"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/3071717"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0009" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0165" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0328"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0061" sboTerm="SBO:0000176" id="r_0061" name="3-isopropylmalate dehydrogenase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YCL018W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0061"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R04426"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/6297759"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0009" stoichiometry="1" constant="true"/> <speciesReference species="s_1198" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0010" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1203" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0101"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0062" sboTerm="SBO:0000176" id="r_0062" name="3-methyl-2-oxobutanoate decarboxylase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YLR134W OR YGR087C OR YLR044C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0062"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/12902239"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0232" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0456" stoichiometry="1" constant="true"/> <speciesReference species="s_0937" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0370"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0636"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0647"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0063" sboTerm="SBO:0000176" id="r_0063" name="3-methyl-2-oxobutanoate hydroxymethyltransferase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YBR176W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0063"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01226"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0233" stoichiometry="1" constant="true"/> <speciesReference species="s_0307" stoichiometry="1" constant="true"/> <speciesReference species="s_0807" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0150" stoichiometry="1" constant="true"/> <speciesReference species="s_1488" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0075"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0064" sboTerm="SBO:0000176" id="r_0064" name="3-methyl-2-oxopentanoate decarboxylase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YLR134W OR YDL080C OR YGR087C OR YLR044C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0064"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03894"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/12902239"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0056" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0166" stoichiometry="1" constant="true"/> <speciesReference species="s_0456" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0370"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0636"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0138"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0647"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0065" sboTerm="SBO:0000176" id="r_0065" name="3-phosphoshikimate 1-carboxyvinyltransferase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDR127W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0065"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03460"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/6355828"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0261" stoichiometry="1" constant="true"/> <speciesReference species="s_1360" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0324" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0182"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0066" sboTerm="SBO:0000176" id="r_0066" name="4-amino-4-deoxychorismate synthase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YNR033W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0066"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01716"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0515" stoichiometry="1" constant="true"/> <speciesReference species="s_0999" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0269" stoichiometry="1" constant="true"/> <speciesReference species="s_0991" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0810"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0067" sboTerm="SBO:0000176" id="r_0067" name="4-aminobenzoate synthase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YMR289W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0067"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R05553"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0269" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0271" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1399" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0759"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0068" sboTerm="SBO:0000176" id="r_0068" name="4-aminobutyrate transaminase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YGR019W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0068"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01648"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/10590462"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0180" stoichiometry="1" constant="true"/> <speciesReference species="s_0734" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0991" stoichiometry="1" constant="true"/> <speciesReference species="s_1461" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0361"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0069" sboTerm="SBO:0000176" id="r_0069" name="4-hydroxy-L-threonine synthase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YCR053W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0069"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R05086"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/8082795"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0264" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0285" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0122"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0070" sboTerm="SBO:0000176" id="r_0070" name="4-hydroxybenzoate formation" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0070"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01301"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/11583838"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0290" stoichiometry="1" constant="true"/> <speciesReference species="s_0807" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0287" stoichiometry="1" constant="true"/> <speciesReference species="s_0532" stoichiometry="1" constant="true"/> <speciesReference species="s_0799" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="meta_r_0072" sboTerm="SBO:0000176" id="r_0072" name="4-methyl-2-oxopentanoate decarboxylase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDL080C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0072"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/12902239"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0291" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0234" stoichiometry="1" constant="true"/> <speciesReference species="s_0456" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0138"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0073" sboTerm="SBO:0000176" id="r_0073" name="4PP-IP5 depyrophosphorylation to IP6" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YOR163W OR YLR410W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0073"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R05779"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/17412958"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0279" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0794" stoichiometry="2" constant="true"/> <speciesReference species="s_1158" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0691"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0866"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0074" sboTerm="SBO:0000176" id="r_0074" name="4PP-IP5 pyrophosphorylation to 4,5-PP2-IP4" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDR017C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0074"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/17412958"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0279" stoichiometry="1" constant="true"/> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="2" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0263" stoichiometry="1" constant="true"/> <speciesReference species="s_0394" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0166"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0075" sboTerm="SBO:0000176" id="r_0075" name="5'-methylthioadenosine phosphorylase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YLR017W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0075"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01402"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/14506228"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0303" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0383" stoichiometry="1" constant="true"/> <speciesReference species="s_1422" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0627"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0076" sboTerm="SBO:0000176" id="r_0076" name="5'-nucleotidase (CMP)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YGL224C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0076"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00511"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/11934891"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0526" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0543" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0350"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0077" sboTerm="SBO:0000176" id="r_0077" name="5'-nucleotidase (IMP)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YOR155C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0077"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01126"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/12735798"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> <speciesReference species="s_0849" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0856" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0865"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0078" sboTerm="SBO:0000176" id="r_0078" name="5'-nucleotidase (UMP)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YGL224C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0078"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00963"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/11934891"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> <speciesReference species="s_1545" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> <speciesReference species="s_1556" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0350"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0079" sboTerm="SBO:0000176" id="r_0079" name="5'-phosphoribosylformyl glycinamidine synthetase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YGR061C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0079"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R04463"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0301" stoichiometry="1" constant="true"/> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> <speciesReference species="s_0999" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0302" stoichiometry="1" constant="true"/> <speciesReference species="s_0394" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_0991" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0368"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0080" sboTerm="SBO:0000176" id="r_0080" name="5,10-methylenetetrahydrofolate reductase (NADPH)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YPL023C OR YGL125W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0080"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01224"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/21623372"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0306" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="2" constant="true"/> <speciesReference species="s_1212" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0322" stoichiometry="1" constant="true"/> <speciesReference species="s_1207" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0340"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0903"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0081" sboTerm="SBO:0000176" id="r_0081" name="5-aminolevulinate synthase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDR232W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0081"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00830"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0799" stoichiometry="1" constant="true"/> <speciesReference species="s_1005" stoichiometry="1" constant="true"/> <speciesReference species="s_1464" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0317" stoichiometry="1" constant="true"/> <speciesReference species="s_0460" stoichiometry="1" constant="true"/> <speciesReference species="s_0532" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0195"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0082" sboTerm="SBO:0000176" id="r_0082" name="5-diphosphoinositol-1,2,3,4,6-pentakisphosphate diphosphohydrolase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YOR163W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0082"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R05779"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/10419486"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0318" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0794" stoichiometry="2" constant="true"/> <speciesReference species="s_1158" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0866"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0083" sboTerm="SBO:0000176" id="r_0083" name="5-diphosphoinositol-1,2,3,4,6-pentakisphosphate synthase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDR017C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0083"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R09087"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/11956213"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1158" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0318" stoichiometry="1" constant="true"/> <speciesReference species="s_0394" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0166"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0084" sboTerm="SBO:0000176" id="r_0084" name="5-formethyltetrahydrofolate cyclo-ligase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YER183C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0084"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02301"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0319" stoichiometry="1" constant="true"/> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0304" stoichiometry="1" constant="true"/> <speciesReference species="s_0394" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0307"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0085" sboTerm="SBO:0000176" id="r_0085" name="5-methyltetrahydropteroyltriglutamate-homocysteine S-methyltransferase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YER091C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0085"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R04405"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/3542720"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0323" stoichiometry="1" constant="true"/> <speciesReference species="s_1012" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1029" stoichiometry="1" constant="true"/> <speciesReference species="s_1486" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0298"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0086" sboTerm="SBO:0000176" id="r_0086" name="5-methylthio-5-deoxy-D-ribulose 1-phosphate dehydratase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0086"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R07392"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/14506228"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_1423" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0311" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="meta_r_0087" sboTerm="SBO:0000176" id="r_0087" name="5-methylthioribose-1-phosphate isomerase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0087"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R04420"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/14506228"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_1422" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1423" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="meta_r_0088" sboTerm="SBO:0000176" id="r_0088" name="5PP-IP5 pyrophosphorylation to 4,5-PP2-IP4" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YLR410W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0088"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/17412958"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0318" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="2" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0263" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0691"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0089" sboTerm="SBO:0000176" id="r_0089" name="5PP-IP5 pyrophosphorylation to 5,6-PP2-IP4" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YLR410W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0089"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/17412958"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0318" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="2" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0309" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0691"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000176" id="r_0090" name="6-phosphofructo-2-kinase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YOL136C OR YIL107C)</p> </body> </notes> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_0557" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0394" stoichiometry="1" constant="true"/> <speciesReference species="s_0442" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0474"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0839"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0091" sboTerm="SBO:0000176" id="r_0091" name="6-phosphogluconolactonase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YGR248W OR YHR163W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0091"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02035"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/14454532"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0335" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0340" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0453"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0404"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0092" sboTerm="SBO:0000176" id="r_0092" name="6PP-IP5 depyrophosphorylation to IP6" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YOR163W OR YLR410W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0092"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R05779"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/17412958"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0333" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0794" stoichiometry="2" constant="true"/> <speciesReference species="s_1158" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0691"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0866"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0093" sboTerm="SBO:0000176" id="r_0093" name="6PP-IP5 pyrophosphorylation to 5,6-PP2-IP4" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDR017C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0093"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/17412958"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0333" stoichiometry="1" constant="true"/> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="2" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0309" stoichiometry="1" constant="true"/> <speciesReference species="s_0394" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0166"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0094" sboTerm="SBO:0000176" id="r_0094" name="8-amino-7-oxononanoate synthase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0094"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03210"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/16269718"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0955" stoichiometry="1" constant="true"/> <speciesReference species="s_1368" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0352" stoichiometry="1" constant="true"/> <speciesReference species="s_0456" stoichiometry="1" constant="true"/> <speciesReference species="s_0529" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="4" constant="true"/> </listOfProducts> </reaction> <reaction metaid="meta_r_0095" sboTerm="SBO:0000176" id="r_0095" name="acetaldehyde condensation" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YLR134W OR YGR087C OR YLR044C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0095"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/12902239"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0359" stoichiometry="2" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0020" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0370"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0636"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0647"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0096" sboTerm="SBO:0000176" id="r_0096" name="acetohydroxy acid isomeroreductase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YLR355C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0096"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/8972574"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0146" stoichiometry="1" constant="true"/> <speciesReference species="s_0799" stoichiometry="1" constant="true"/> <speciesReference species="s_1214" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0016" stoichiometry="1" constant="true"/> <speciesReference species="s_1210" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0685"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0097" sboTerm="SBO:0000176" id="r_0097" name="acetolactate synthase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YMR108W OR (YCL009C AND YMR108W))</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0097"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00006"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/8972574"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0799" stoichiometry="1" constant="true"/> <speciesReference species="s_1401" stoichiometry="2" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0146" stoichiometry="1" constant="true"/> <speciesReference species="s_0460" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0734"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0100"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0099" sboTerm="SBO:0000176" id="r_0099" name="acetyl-CoA ACP transacylase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YKL192C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0099"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01624"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/15387819"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0376" stoichiometry="1" constant="true"/> <speciesReference species="s_1845" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0372" stoichiometry="1" constant="true"/> <speciesReference species="s_0532" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="s_1845"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000176" id="r_0100" name="acetyl-CoA C-acyltransferase (palmitoyl-CoA)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YIL160C</p> </body> </notes> <listOfReactants> <speciesReference species="s_0250" stoichiometry="1" constant="true"/> <speciesReference species="s_0534" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0378" stoichiometry="1" constant="true"/> <speciesReference species="s_1305" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0481"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000176" id="r_0101" name="acetyl-CoA C-acyltransferase (tetracosanoyl-CoA)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YIL160C</p> </body> </notes> <listOfReactants> <speciesReference species="s_0243" stoichiometry="1" constant="true"/> <speciesReference species="s_0534" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0378" stoichiometry="1" constant="true"/> <speciesReference species="s_1482" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0481"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0102" sboTerm="SBO:0000176" id="r_0102" name="acetyl-CoA C-acyltransferase (myristoyl-CoA)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YIL160C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0102"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03991"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0253" stoichiometry="1" constant="true"/> <speciesReference species="s_0534" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0378" stoichiometry="1" constant="true"/> <speciesReference species="s_1179" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0481"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000176" id="r_0103" name="acetyl-CoA C-acetyltransferase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YPL028W</p> </body> </notes> <listOfReactants> <speciesReference species="s_0373" stoichiometry="2" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0367" stoichiometry="1" constant="true"/> <speciesReference species="s_0529" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0904"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000176" id="r_0104" name="acetyl-CoA C-acetyltransferase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YPL028W</p> </body> </notes> <listOfReactants> <speciesReference species="s_0376" stoichiometry="2" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0370" stoichiometry="1" constant="true"/> <speciesReference species="s_0532" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0905"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0105" sboTerm="SBO:0000176" id="r_0105" name="acetyl-CoA C-acyltransferase (lauroyl-CoA)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YIL160C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0105"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03858"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0257" stoichiometry="1" constant="true"/> <speciesReference species="s_0534" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0378" stoichiometry="1" constant="true"/> <speciesReference species="s_1076" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0481"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0106" sboTerm="SBO:0000176" id="r_0106" name="acetyl-CoA C-acyltransferase (octanoyl-CoA)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YIL160C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0106"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03778"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0239" stoichiometry="1" constant="true"/> <speciesReference species="s_0534" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0378" stoichiometry="1" constant="true"/> <speciesReference species="s_1258" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0481"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0107" sboTerm="SBO:0000176" id="r_0107" name="acetyl-CoA C-acyltransferase (decanoyl-CoA)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YIL160C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0107"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R04742"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0247" stoichiometry="1" constant="true"/> <speciesReference species="s_0534" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0378" stoichiometry="1" constant="true"/> <speciesReference species="s_0605" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0481"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0108" sboTerm="SBO:0000176" id="r_0108" name="acetyl-Coa carboxylase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YMR207C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0108"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00742"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/14761959"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0376" stoichiometry="1" constant="true"/> <speciesReference species="s_0437" stoichiometry="1" constant="true"/> <speciesReference species="s_0447" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0397" stoichiometry="1" constant="true"/> <speciesReference species="s_0799" stoichiometry="1" constant="true"/> <speciesReference species="s_1104" stoichiometry="1" constant="true"/> <speciesReference species="s_1326" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0744"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0109" sboTerm="SBO:0000176" id="r_0109" name="acetyl-CoA carboxylase, reaction" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YNR016C AND YDL141W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0109"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00742"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0373" stoichiometry="1" constant="true"/> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_0445" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0394" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1101" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0808"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0147"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0111" sboTerm="SBO:0000176" id="r_0111" name="acetyl-CoA hydrolase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YBL015W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0111"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00227"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0376" stoichiometry="1" constant="true"/> <speciesReference species="s_0807" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0365" stoichiometry="1" constant="true"/> <speciesReference species="s_0532" stoichiometry="1" constant="true"/> <speciesReference species="s_0799" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0023"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0112" sboTerm="SBO:0000176" id="r_0112" name="acetyl-CoA synthetase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YAL054C OR YLR153C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0112"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00235"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/8910545"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0362" stoichiometry="1" constant="true"/> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_0529" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0373" stoichiometry="1" constant="true"/> <speciesReference species="s_0423" stoichiometry="1" constant="true"/> <speciesReference species="s_0633" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0651"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0013"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0113" sboTerm="SBO:0000176" id="r_0113" name="acetyl-CoA synthetase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YAL054C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0113"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00235"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0365" stoichiometry="1" constant="true"/> <speciesReference species="s_0437" stoichiometry="1" constant="true"/> <speciesReference species="s_0532" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0376" stoichiometry="1" constant="true"/> <speciesReference species="s_0424" stoichiometry="1" constant="true"/> <speciesReference species="s_0636" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0014"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0114" sboTerm="SBO:0000176" id="r_0114" name="acetyl-CoA synthetase nuclear" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YLR153C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0114"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00235"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/16857587"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0366" stoichiometry="1" constant="true"/> <speciesReference species="s_0438" stoichiometry="1" constant="true"/> <speciesReference species="s_0533" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0377" stoichiometry="1" constant="true"/> <speciesReference species="s_0425" stoichiometry="1" constant="true"/> <speciesReference species="s_0637" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0652"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0115" sboTerm="SBO:0000176" id="r_0115" name="acetylglutamate kinase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YER069W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0115"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02649"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0437" stoichiometry="1" constant="true"/> <speciesReference species="s_1192" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0397" stoichiometry="1" constant="true"/> <speciesReference species="s_1191" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0290"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0116" sboTerm="SBO:0000176" id="r_0116" name="acid phosphatase (secreted)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YBR093C OR YAR071W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0116"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00548"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/13405892"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0715" stoichiometry="1" constant="true"/> <speciesReference species="s_0805" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1324" stoichiometry="1" constant="true"/> <speciesReference species="s_1406" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0019"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0060"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0117" sboTerm="SBO:0000176" id="r_0117" name="aconitase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YPR002W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0117"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/16332871"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0174" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0012" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0948"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0118" sboTerm="SBO:0000176" id="r_0118" name="acteylornithine transaminase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YOL140W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0118"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02283"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0145" stoichiometry="1" constant="true"/> <speciesReference species="s_0993" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0182" stoichiometry="1" constant="true"/> <speciesReference species="s_1182" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0840"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000176" id="r_0119" name="acyl carrier protein synthase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YPL148C</p> </body> </notes> <listOfReactants> <speciesReference species="s_0532" stoichiometry="1" constant="true"/> <speciesReference species="s_0807" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0392" stoichiometry="1" constant="true"/> <speciesReference species="s_0799" stoichiometry="2" constant="true"/> <speciesReference species="s_1308" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0925"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000176" id="r_0120" name="acyl-CoA oxidase (decanoyl-CoA)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YGL205W</p> </body> </notes> <listOfReactants> <speciesReference species="s_0605" stoichiometry="1" constant="true"/> <speciesReference species="s_1279" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0840" stoichiometry="1" constant="true"/> <speciesReference species="s_1507" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0349"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000176" id="r_0121" name="acyl-CoA oxidase (dodecanoyl-CoA)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YGL205W</p> </body> </notes> <listOfReactants> <speciesReference species="s_1076" stoichiometry="1" constant="true"/> <speciesReference species="s_1279" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0840" stoichiometry="1" constant="true"/> <speciesReference species="s_1510" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0349"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000176" id="r_0122" name="acyl-CoA oxidase (hexacosanoyl-CoA)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YGL205W</p> </body> </notes> <listOfReactants> <speciesReference species="s_0819" stoichiometry="1" constant="true"/> <speciesReference species="s_1279" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0840" stoichiometry="1" constant="true"/> <speciesReference species="s_1513" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0349"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000176" id="r_0123" name="acyl-CoA oxidase (hexadecanoyl-CoA)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YGL205W</p> </body> </notes> <listOfReactants> <speciesReference species="s_1279" stoichiometry="1" constant="true"/> <speciesReference species="s_1305" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0823" stoichiometry="1" constant="true"/> <speciesReference species="s_0840" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0349"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000176" id="r_0124" name="acyl-CoA oxidase (octadecanoyl-CoA)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YGL205W</p> </body> </notes> <listOfReactants> <speciesReference species="s_1279" stoichiometry="1" constant="true"/> <speciesReference species="s_1457" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0840" stoichiometry="1" constant="true"/> <speciesReference species="s_1516" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0349"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000176" id="r_0125" name="acyl-CoA oxidase (tetradecanoyl-CoA)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YGL205W</p> </body> </notes> <listOfReactants> <speciesReference species="s_1179" stoichiometry="1" constant="true"/> <speciesReference species="s_1279" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0840" stoichiometry="1" constant="true"/> <speciesReference species="s_1519" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0349"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0126" sboTerm="SBO:0000176" id="r_0126" name="acyl-CoA:sterol acyltransferase (oleoyl-CoA:episterol), ER membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YCR048W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0126"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/10672016"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3432" stoichiometry="1" constant="true"/> <speciesReference species="s_2821" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2785" stoichiometry="1" constant="true"/> <speciesReference species="s_3433" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1010"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0127" sboTerm="SBO:0000176" id="r_0127" name="acyl-CoA:sterol acyltransferase (oleoyl-CoA:ergosterol), ER membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YCR048W OR YNR019W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0127"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/10672016"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3441" stoichiometry="1" constant="true"/> <speciesReference species="s_2821" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2785" stoichiometry="1" constant="true"/> <speciesReference species="s_3442" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1010"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1009"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0128" sboTerm="SBO:0000176" id="r_0128" name="acyl-CoA:sterol acyltransferase (oleoyl-CoA:fecosterol), ER membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YCR048W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0128"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/10672016"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3435" stoichiometry="1" constant="true"/> <speciesReference species="s_2821" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2785" stoichiometry="1" constant="true"/> <speciesReference species="s_3436" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1010"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0129" sboTerm="SBO:0000176" id="r_0129" name="acyl-CoA:sterol acyltransferase (oleoyl-CoA:lanosterol), ER membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YCR048W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0129"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/10672016"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3438" stoichiometry="1" constant="true"/> <speciesReference species="s_2821" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2785" stoichiometry="1" constant="true"/> <speciesReference species="s_3439" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1010"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0130" sboTerm="SBO:0000176" id="r_0130" name="acyl-CoA:sterol acyltransferase (oleoyl-CoA:zymosterol), ER membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YCR048W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0130"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/10672016"/> </rdf:Bag> 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</bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3432" stoichiometry="1" constant="true"/> <speciesReference species="s_2819" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2785" stoichiometry="1" constant="true"/> <speciesReference species="s_3434" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1010"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0132" sboTerm="SBO:0000176" id="r_0132" name="acyl-CoA:sterol acyltransferase (palmitoleoyl-CoA:ergosterol), ER membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YCR048W OR YNR019W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0132"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/10672016"/> 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<rdf:li rdf:resource="http://identifiers.org/pubmed/10672016"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3435" stoichiometry="1" constant="true"/> <speciesReference species="s_2819" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2785" stoichiometry="1" constant="true"/> <speciesReference species="s_3437" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1010"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0134" sboTerm="SBO:0000176" id="r_0134" name="acyl-CoA:sterol acyltransferase (palmitoleoyl-CoA:lanosterol), ER membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YCR048W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0134"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/10672016"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3438" stoichiometry="1" constant="true"/> <speciesReference species="s_2819" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2785" stoichiometry="1" constant="true"/> <speciesReference species="s_3440" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1010"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0135" sboTerm="SBO:0000176" id="r_0135" name="acyl-CoA:sterol acyltransferase (palmitoleoyl-CoA:zymosterol), ER membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YCR048W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0135"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/10672016"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3444" stoichiometry="1" constant="true"/> <speciesReference species="s_2819" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2785" stoichiometry="1" constant="true"/> <speciesReference species="s_3446" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1010"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0137" sboTerm="SBO:0000176" id="r_0137" name="acylation of GPI inositol at 2 position, GPI-anchor assembly, step 3" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YJL091C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0137"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li 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<listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0227"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0142" sboTerm="SBO:0000176" id="r_0142" name="adenosine kinase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YJR105W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0142"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00185"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0386" stoichiometry="1" constant="true"/> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0394" stoichiometry="1" constant="true"/> <speciesReference species="s_0423" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0541"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000176" id="r_0143" name="adenosine monophosphate deaminase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YML035C</p> </body> </notes> <listOfReactants> <speciesReference species="s_0423" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0419" stoichiometry="1" constant="true"/> <speciesReference species="s_0849" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0701"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0144" sboTerm="SBO:0000176" id="r_0144" name="adenosylhomocysteinase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YER043C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0144"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00192"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/15556636"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> <speciesReference species="s_1413" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0386" stoichiometry="1" constant="true"/> <speciesReference species="s_1012" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0280"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0145" sboTerm="SBO:0000176" id="r_0145" name="adenosylmethionine decarboxylase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YOL052C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0145"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00178"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/3087344"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1416" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0456" stoichiometry="1" constant="true"/> <speciesReference species="s_1420" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0824"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0146" sboTerm="SBO:0000176" id="r_0146" name="adenosylmethionine-8-amino-7-oxononanoate transaminase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YNR058W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0146"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03231"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0352" stoichiometry="1" constant="true"/> <speciesReference species="s_1416" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0341" stoichiometry="1" constant="true"/> <speciesReference species="s_1412" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0816"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0147" sboTerm="SBO:0000176" id="r_0147" name="adenylate cyclase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YJL005W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0147"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00089"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0192" stoichiometry="1" constant="true"/> <speciesReference species="s_0633" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0491"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0148" sboTerm="SBO:0000176" id="r_0148" name="adenylate kinase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDR226W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0148"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00127"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0423" stoichiometry="1" constant="true"/> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0394" stoichiometry="2" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0194"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0149" sboTerm="SBO:0000176" id="r_0149" name="adenylate kinase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YER170W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0149"> <bqbiol:is> <rdf:Bag> <rdf:li 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<modifierSpeciesReference sboTerm="SBO:0000460" species="e_0686"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0152" sboTerm="SBO:0000176" id="r_0152" name="adenylosuccinate lyase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YLR359W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0152"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01083"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0393" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0423" stoichiometry="1" constant="true"/> <speciesReference species="s_0725" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0686"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0153" sboTerm="SBO:0000176" id="r_0153" name="adenylosuccinate synthase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YNL220W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0153"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01135"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0785" stoichiometry="1" constant="true"/> <speciesReference species="s_0849" stoichiometry="1" constant="true"/> <speciesReference species="s_0973" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0393" stoichiometry="1" constant="true"/> <speciesReference species="s_0739" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="2" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0791"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0154" sboTerm="SBO:0000176" id="r_0154" name="adenylyl-sulfate kinase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YKL001C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0154"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00509"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/1654509"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0298" stoichiometry="1" constant="true"/> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0201" stoichiometry="1" constant="true"/> <speciesReference species="s_0394" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0556"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0155" sboTerm="SBO:0000176" id="r_0155" name="ADP-ribose 2,3-cyclic phosphodiesterase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YGR247W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0155"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/10734185"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0131" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0389" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0403"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0156" sboTerm="SBO:0000176" id="r_0156" name="alanine glyoxylate aminotransferase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YFL030W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0156"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00369"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0779" stoichiometry="1" constant="true"/> <speciesReference species="s_0955" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1003" stoichiometry="1" constant="true"/> <speciesReference species="s_1399" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0313"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0157" sboTerm="SBO:0000176" id="r_0157" name="alanyl-tRNA synthetase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YOR335C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0157"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03038"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/7761427"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_0955" stoichiometry="1" constant="true"/> <speciesReference species="s_1582" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0404" stoichiometry="1" constant="true"/> <speciesReference species="s_0423" stoichiometry="1" constant="true"/> <speciesReference species="s_0633" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0894"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0158" sboTerm="SBO:0000176" id="r_0158" name="alcohol acetyltransferase (2-methylbutanol)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YGR177C OR YOR377W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0158"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/12957907"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0169" stoichiometry="1" constant="true"/> <speciesReference species="s_0373" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0172" stoichiometry="1" constant="true"/> <speciesReference species="s_0529" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0900"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0386"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0159" sboTerm="SBO:0000176" id="r_0159" name="alcohol acetyltransferase (ethanol)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YGR177C OR YOR377W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0159"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/12957907"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0373" stoichiometry="1" constant="true"/> <speciesReference species="s_0680" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0529" stoichiometry="1" constant="true"/> <speciesReference species="s_0685" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0900"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0386"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0160" sboTerm="SBO:0000176" id="r_0160" name="alcohol acetyltransferase (isoamyl alcohol)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YGR177C OR YOR377W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0160"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/12957907"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0373" stoichiometry="1" constant="true"/> <speciesReference species="s_0929" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0529" stoichiometry="1" constant="true"/> <speciesReference species="s_0927" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0900"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0386"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0161" sboTerm="SBO:0000176" id="r_0161" name="alcohol acetyltransferase (isobutyl alcohol)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YGR177C OR YOR377W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0161"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/12957907"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0373" stoichiometry="1" constant="true"/> <speciesReference species="s_0932" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0529" stoichiometry="1" constant="true"/> <speciesReference species="s_0935" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0900"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0386"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0162" sboTerm="SBO:0000176" id="r_0162" name="alcohol acetyltransferase (phenylethanol alcohol)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YGR177C OR YOR377W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0162"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/12957907"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0185" stoichiometry="1" constant="true"/> <speciesReference species="s_0373" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0529" stoichiometry="1" constant="true"/> <speciesReference species="s_1316" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0900"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0386"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0163" sboTerm="SBO:0000176" id="r_0163" name="alcohol dehydrogenase (ethanol to acetaldehyde)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YMR303C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0163"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00754"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/12702265"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0680" stoichiometry="1" constant="true"/> <speciesReference species="s_1198" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0359" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1203" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0764"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0164" sboTerm="SBO:0000176" id="r_0164" name="alcohol dehydrogenase (glycerol, NADP)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YDR368W OR YHR104W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0164"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01041"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/12210903"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0570" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1212" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0765" stoichiometry="1" constant="true"/> <speciesReference species="s_1207" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0221"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0447"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0165" sboTerm="SBO:0000176" id="r_0165" name="mitochondrial alcohol dehydrogenase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YGL256W OR YMR083W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0165"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00754"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/12499363"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0361" stoichiometry="1" constant="true"/> <speciesReference species="s_0799" stoichiometry="1" constant="true"/> <speciesReference species="s_1205" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0682" stoichiometry="1" constant="true"/> <speciesReference species="s_1200" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0730"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0356"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0166" sboTerm="SBO:0000176" id="r_0166" name="aldehyde dehydrogenase (2-methylbutanol, NAD)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YOL086C OR YBR145W OR YDL168W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0166"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/12702265"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0166" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1203" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0169" stoichiometry="1" constant="true"/> <speciesReference species="s_1198" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0149"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0069"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0834"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0167" sboTerm="SBO:0000176" id="r_0167" name="aldehyde dehydrogenase (2-methylbutanol, NAD)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YGL256W OR YMR083W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0167"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/12499363"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0168" stoichiometry="1" constant="true"/> <speciesReference species="s_0799" stoichiometry="1" constant="true"/> <speciesReference species="s_1205" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0171" stoichiometry="1" constant="true"/> <speciesReference species="s_1200" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0730"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0356"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0168" sboTerm="SBO:0000176" id="r_0168" name="aldehyde dehydrogenase (2-methylbutanol, NADP)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YCR105W OR YDR368W OR YMR318C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0168"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/12210903"/> <rdf:li rdf:resource="http://identifiers.org/pubmed/12423374"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0166" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1212" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0169" stoichiometry="1" constant="true"/> <speciesReference species="s_1207" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0766"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0221"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0126"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0169" sboTerm="SBO:0000176" id="r_0169" name="aldehyde dehydrogenase (2-phenylethanol, NAD)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YOL086C OR YBR145W OR YDL168W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0169"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02611"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/12702265"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1203" stoichiometry="1" constant="true"/> <speciesReference species="s_1318" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0185" stoichiometry="1" constant="true"/> <speciesReference species="s_1198" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0149"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0069"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0834"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0170" sboTerm="SBO:0000176" id="r_0170" name="aldehyde dehydrogenase (2-phenylethanol, NAD)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YGL256W OR YMR083W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0170"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02611"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/12499363"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0799" stoichiometry="1" constant="true"/> <speciesReference species="s_1205" stoichiometry="1" constant="true"/> <speciesReference species="s_1320" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0187" stoichiometry="1" constant="true"/> <speciesReference species="s_1200" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0730"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0356"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0171" sboTerm="SBO:0000176" id="r_0171" name="aldehyde dehydrogenase (2-phenylethanol, NADP)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YCR105W OR YMR318C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0171"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/11742541"/> <rdf:li rdf:resource="http://identifiers.org/pubmed/12423374"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1212" stoichiometry="1" constant="true"/> <speciesReference species="s_1318" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0185" stoichiometry="1" constant="true"/> <speciesReference species="s_1207" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0766"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0126"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0172" sboTerm="SBO:0000176" id="r_0172" name="aldehyde dehydrogenase (3-aminopropanal, NAD)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YMR169C OR YMR170C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0172"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/12586697"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0208" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> <speciesReference species="s_1198" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0441" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="2" constant="true"/> <speciesReference species="s_1203" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0740"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0739"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0173" sboTerm="SBO:0000176" id="r_0173" name="aldehyde dehydrogenase (acetaldehyde, NADP)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YPL061W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0173"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00711"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/15256563"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0359" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> <speciesReference species="s_1207" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0362" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="2" constant="true"/> <speciesReference species="s_1212" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0911"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0174" sboTerm="SBO:0000176" id="r_0174" name="aldehyde dehydrogenase (acetylaldehyde, NAD)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YOR374W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0174"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00710"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/15256563"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0361" stoichiometry="1" constant="true"/> <speciesReference species="s_0807" stoichiometry="1" constant="true"/> <speciesReference species="s_1200" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0365" stoichiometry="1" constant="true"/> <speciesReference species="s_0799" stoichiometry="2" constant="true"/> <speciesReference species="s_1205" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0898"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0175" sboTerm="SBO:0000176" id="r_0175" name="aldehyde dehydrogenase (acetylaldehyde, NADP)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YER073W OR YOR374W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0175"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00711"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/15256563"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0361" stoichiometry="1" constant="true"/> <speciesReference species="s_0807" stoichiometry="1" constant="true"/> <speciesReference species="s_1210" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0365" stoichiometry="1" constant="true"/> <speciesReference species="s_0799" stoichiometry="2" constant="true"/> <speciesReference species="s_1214" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0898"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0293"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0176" sboTerm="SBO:0000176" id="r_0176" name="aldehyde dehydrogenase (indole-3-acetaldehyde, NAD)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YOR374W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0176"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02678"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0807" stoichiometry="1" constant="true"/> <speciesReference species="s_0852" stoichiometry="1" constant="true"/> <speciesReference species="s_1200" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0799" stoichiometry="2" constant="true"/> <speciesReference species="s_0854" stoichiometry="1" constant="true"/> <speciesReference species="s_1205" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0898"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000176" id="r_0177" name="aldehyde dehydrogenase (indole-3-acetaldehyde, NADP)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YPL061W</p> </body> </notes> <listOfReactants> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> <speciesReference species="s_0850" stoichiometry="1" constant="true"/> <speciesReference species="s_1207" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0794" stoichiometry="2" constant="true"/> <speciesReference species="s_0853" stoichiometry="1" constant="true"/> <speciesReference species="s_1212" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0911"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0178" sboTerm="SBO:0000176" id="r_0178" name="aldehyde dehydrogenase (indole-3-acetaldehyde, NADP)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YER073W OR YOR374W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0178"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/9675847"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0807" stoichiometry="1" constant="true"/> <speciesReference species="s_0852" stoichiometry="1" constant="true"/> <speciesReference species="s_1210" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0799" stoichiometry="2" constant="true"/> <speciesReference species="s_0854" stoichiometry="1" constant="true"/> <speciesReference species="s_1214" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0898"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0293"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0179" sboTerm="SBO:0000176" id="r_0179" name="aldehyde dehydrogenase (isoamyl alcohol, NAD)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YOL086C OR YBR145W OR YDL168W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0179"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R05685"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/12702265"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0234" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1203" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0929" stoichiometry="1" constant="true"/> <speciesReference species="s_1198" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0149"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0069"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0834"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0180" sboTerm="SBO:0000176" id="r_0180" name="aldehyde dehydrogenase (isoamyl alcohol, NAD)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YGL256W OR YMR083W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0180"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R05685"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/12499363"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0236" stoichiometry="1" constant="true"/> <speciesReference species="s_0799" stoichiometry="1" constant="true"/> <speciesReference species="s_1205" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0931" stoichiometry="1" constant="true"/> <speciesReference species="s_1200" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0730"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0356"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0181" sboTerm="SBO:0000176" id="r_0181" name="aldehyde dehydrogenase (isoamyl alcohol, NADP)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YCR105W OR YMR318C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0181"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R05686"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/11742541"/> <rdf:li rdf:resource="http://identifiers.org/pubmed/12423374"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0234" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1212" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0929" stoichiometry="1" constant="true"/> <speciesReference species="s_1207" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0766"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0126"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0182" sboTerm="SBO:0000176" id="r_0182" name="aldehyde dehydrogenase (isobutyl alcohol, NAD)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YOL086C OR YBR145W OR YDL168W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0182"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/12702265"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_0937" stoichiometry="1" constant="true"/> <speciesReference species="s_1203" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0932" stoichiometry="1" constant="true"/> <speciesReference species="s_1198" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0149"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0069"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0834"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0183" sboTerm="SBO:0000176" id="r_0183" name="aldehyde dehydrogenase (isobutyl alcohol, NAD)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YGL256W OR YMR083W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0183"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/12499363"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0799" stoichiometry="1" constant="true"/> <speciesReference species="s_0939" stoichiometry="1" constant="true"/> <speciesReference species="s_1205" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0934" stoichiometry="1" constant="true"/> <speciesReference species="s_1200" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0730"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0356"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0184" sboTerm="SBO:0000176" id="r_0184" name="aldehyde dehydrogenase (isobutyl alcohol, NADP)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YCR105W OR YMR318C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0184"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/11742541"/> <rdf:li rdf:resource="http://identifiers.org/pubmed/12423374"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_0937" stoichiometry="1" constant="true"/> <speciesReference species="s_1212" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0932" stoichiometry="1" constant="true"/> <speciesReference species="s_1207" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0766"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0126"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0185" sboTerm="SBO:0000176" id="r_0185" name="aldehyde dehydrogenase (phenylacetaldehyde, NAD)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YMR169C OR YMR170C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0185"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02536"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/8801420"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> <speciesReference species="s_1198" stoichiometry="1" constant="true"/> <speciesReference species="s_1318" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0794" stoichiometry="2" constant="true"/> <speciesReference species="s_1203" stoichiometry="1" constant="true"/> <speciesReference species="s_1321" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0740"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0739"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0186" sboTerm="SBO:0000176" id="r_0186" name="aldehyde dehydrogenase (tryptophol, NAD)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YOL086C OR YBR145W OR YDL168W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0186"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02679"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/12702265"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_0850" stoichiometry="1" constant="true"/> <speciesReference species="s_1203" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1198" stoichiometry="1" constant="true"/> <speciesReference species="s_1529" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0149"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0069"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0834"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0187" sboTerm="SBO:0000176" id="r_0187" name="aldehyde dehydrogenase (tryptophol, NAD)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YGL256W OR YMR083W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0187"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02679"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/12499363"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0799" stoichiometry="1" constant="true"/> <speciesReference species="s_0852" stoichiometry="1" constant="true"/> <speciesReference species="s_1205" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1200" stoichiometry="1" constant="true"/> <speciesReference species="s_1531" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0730"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0356"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0188" sboTerm="SBO:0000176" id="r_0188" name="alkaline phosphatase (dihydroneopterin)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDR481C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0188"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R04620"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0346" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="3" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0343" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="2" constant="true"/> <speciesReference species="s_1322" stoichiometry="3" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0235"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0189" sboTerm="SBO:0000176" id="r_0189" name="allantoate amidinohydrolase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YIR029W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0189"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/4604238"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0405" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1552" stoichiometry="1" constant="true"/> <speciesReference species="s_1555" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0486"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0190" sboTerm="SBO:0000176" id="r_0190" name="allantoinase, reaction" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YIR027C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0190"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02424"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/4604238"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0407" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0405" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0484"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000176" id="r_0191" name="allophanate hydrolase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YBR208C</p> </body> </notes> <listOfReactants> <speciesReference species="s_0794" stoichiometry="3" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> <speciesReference species="s_1554" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0419" stoichiometry="2" constant="true"/> <speciesReference species="s_0456" stoichiometry="2" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0082"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0192" sboTerm="SBO:0000176" id="r_0192" name="alpha 1,2-mannosyltransferase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YBR205W OR YBR199W OR YDR483W OR YJL139C OR YKR061W OR YNL029C OR YOR099W OR YPL053C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0192"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R05002"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/14752117"/> <rdf:li rdf:resource="http://identifiers.org/pubmed/21623372"/> <rdf:li rdf:resource="http://identifiers.org/pubmed/8631921"/> <rdf:li rdf:resource="http://identifiers.org/pubmed/9020857"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0444" stoichiometry="1" constant="true"/> <speciesReference species="s_0744" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0414" stoichiometry="1" constant="true"/> <speciesReference species="s_0740" stoichiometry="1" constant="true"/> <speciesReference species="s_0797" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0511"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0604"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0081"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0770"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0853"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0080"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0908"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0236"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000176" id="r_0193" name="alpha,alpha-trehalase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YPR026W</p> </body> </notes> <listOfReactants> <speciesReference species="s_0810" stoichiometry="1" constant="true"/> <speciesReference species="s_1522" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0566" stoichiometry="2" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0952"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0194" sboTerm="SBO:0000176" id="r_0194" name="alpha,alpha-trehalase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDR001C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0194"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/8764988"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> <speciesReference species="s_1520" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0563" stoichiometry="2" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0164"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0195" sboTerm="SBO:0000176" id="r_0195" name="alpha,alpha-trehalose-phosphate synthase (UDP-forming)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:((YBR126C AND YDR074W AND YMR261C) OR (YML100W AND YBR126C AND YDR074W))</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0195"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00836"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/21623372"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0568" stoichiometry="1" constant="true"/> <speciesReference species="s_1543" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0409" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1538" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0711"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0065"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0179"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0753"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0198" sboTerm="SBO:0000176" id="r_0198" name="alpha-glucosidase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YJL216C OR YIL172C OR YBR299W OR YGR292W OR YGR287C OR YJL221C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0198"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01555"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> <speciesReference species="s_1105" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0563" stoichiometry="2" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0483"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0414"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0416"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0098"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0523"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0521"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000176" id="r_0199" name="amidase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YMR293C</p> </body> </notes> <listOfReactants> <speciesReference species="s_0280" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0281" stoichiometry="1" constant="true"/> <speciesReference species="s_0419" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0760"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0200" sboTerm="SBO:0000176" id="r_0200" name="Aminoacetone:oxygen oxidoreductase(deaminating)(flavin-containing)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0200"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/3086094"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0418" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> <speciesReference species="s_1275" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0419" stoichiometry="1" constant="true"/> <speciesReference species="s_0837" stoichiometry="1" constant="true"/> <speciesReference species="s_1151" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="meta_r_0201" sboTerm="SBO:0000176" id="r_0201" name="Aminobutyraldehyde dehydrogenase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YOR374W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0201"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02549"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0275" stoichiometry="1" constant="true"/> <speciesReference species="s_0807" stoichiometry="1" constant="true"/> <speciesReference species="s_1200" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0738" stoichiometry="1" constant="true"/> <speciesReference species="s_0799" stoichiometry="2" constant="true"/> <speciesReference species="s_1205" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0898"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0202" sboTerm="SBO:0000176" id="r_0202" name="anthranilate phosphoribosyltransferase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDR354W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0202"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01073"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0427" stoichiometry="1" constant="true"/> <speciesReference species="s_1386" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0633" stoichiometry="1" constant="true"/> <speciesReference species="s_1187" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0219"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0203" sboTerm="SBO:0000176" id="r_0203" name="anthranilate synthase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YER090W AND YKL211C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0203"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00986"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/8001582"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0515" stoichiometry="1" constant="true"/> <speciesReference species="s_0999" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0427" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_0991" stoichiometry="1" constant="true"/> <speciesReference species="s_1399" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0297"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0591"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0204" sboTerm="SBO:0000176" id="r_0204" name="Ap4A hydrolase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDR305C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0204"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00125"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> <speciesReference species="s_1282" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0394" stoichiometry="2" constant="true"/> <speciesReference species="s_0794" stoichiometry="2" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0210"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0205" sboTerm="SBO:0000176" id="r_0205" name="arabinose reductase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YHR104W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0205"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01759"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_0963" stoichiometry="1" constant="true"/> <speciesReference species="s_1212" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0961" stoichiometry="1" constant="true"/> <speciesReference species="s_1207" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0447"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000176" id="r_0206" name="arginase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YPL111W</p> </body> </notes> <listOfReactants> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> <speciesReference species="s_0965" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1266" stoichiometry="1" constant="true"/> <speciesReference species="s_1552" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0921"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0207" sboTerm="SBO:0000176" id="r_0207" name="argininosuccinate lyase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YHR018C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0207"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01086"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0015" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0725" stoichiometry="1" constant="true"/> <speciesReference species="s_0965" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0426"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0208" sboTerm="SBO:0000176" id="r_0208" name="argininosuccinate synthase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YOL058W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0208"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01954"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/35347"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_0973" stoichiometry="1" constant="true"/> <speciesReference species="s_0979" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0015" stoichiometry="1" constant="true"/> <speciesReference species="s_0423" stoichiometry="1" constant="true"/> <speciesReference species="s_0633" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0826"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0209" sboTerm="SBO:0000176" id="r_0209" name="arginyl-tRNA synthetase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDR341C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0209"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03646"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_0965" stoichiometry="1" constant="true"/> <speciesReference species="s_1583" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0423" stoichiometry="1" constant="true"/> <speciesReference species="s_0428" stoichiometry="1" constant="true"/> <speciesReference species="s_0633" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0214"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0210" sboTerm="SBO:0000176" id="r_0210" name="arginyl-tRNA synthetase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YHR091C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0210"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03646"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0437" stoichiometry="1" constant="true"/> <speciesReference species="s_0967" stoichiometry="1" constant="true"/> <speciesReference species="s_1584" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0424" stoichiometry="1" constant="true"/> <speciesReference species="s_0429" stoichiometry="1" constant="true"/> <speciesReference species="s_0636" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0443"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0211" sboTerm="SBO:0000176" id="r_0211" name="asparagine synthase (glutamine-hydrolysing)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YGR124W OR YPR145W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0211"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00578"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/9881155"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> <speciesReference species="s_0973" stoichiometry="1" constant="true"/> <speciesReference species="s_0999" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0423" stoichiometry="1" constant="true"/> <speciesReference species="s_0633" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_0969" stoichiometry="1" constant="true"/> <speciesReference species="s_0991" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0970"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0376"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0212" sboTerm="SBO:0000176" id="r_0212" name="Asparaginyl-tRNA synthetase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YHR019C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0212"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03648"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/9605503"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_0969" stoichiometry="1" constant="true"/> <speciesReference species="s_1585" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0423" stoichiometry="1" constant="true"/> <speciesReference species="s_0430" stoichiometry="1" constant="true"/> <speciesReference species="s_0633" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0427"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0213" sboTerm="SBO:0000176" id="r_0213" name="asparaginyl-tRNA synthetase, miotchondrial" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YCR024C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0213"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03648"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/9605503"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0437" stoichiometry="1" constant="true"/> <speciesReference species="s_0971" stoichiometry="1" constant="true"/> <speciesReference species="s_1586" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0424" stoichiometry="1" constant="true"/> <speciesReference species="s_0431" stoichiometry="1" constant="true"/> <speciesReference species="s_0636" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0114"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0214" sboTerm="SBO:0000176" id="r_0214" name="aspartate carbamoyltransferase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YJL130C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0214"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01397"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0455" stoichiometry="1" constant="true"/> <speciesReference species="s_0973" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1194" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0508"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0215" sboTerm="SBO:0000176" id="r_0215" name="aspartate kinase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YER052C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0215"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00480"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/9315655"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_0973" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0295" stoichiometry="1" constant="true"/> <speciesReference species="s_0394" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0281"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0216" sboTerm="SBO:0000176" id="r_0216" name="aspartate transaminase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YLR027C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0216"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00355"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/1859361"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0180" stoichiometry="1" constant="true"/> <speciesReference species="s_0973" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0991" stoichiometry="1" constant="true"/> <speciesReference species="s_1271" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0629"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0217" sboTerm="SBO:0000176" id="r_0217" name="aspartate transaminase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YKL106W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0217"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00355"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/1482685"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0182" stoichiometry="1" constant="true"/> <speciesReference species="s_0975" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0993" stoichiometry="1" constant="true"/> <speciesReference species="s_1273" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0574"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0218" sboTerm="SBO:0000176" id="r_0218" name="aspartate transaminase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YLR027C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0218"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00355"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/9288922"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0184" stoichiometry="1" constant="true"/> <speciesReference species="s_0976" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0995" stoichiometry="1" constant="true"/> <speciesReference species="s_1274" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0630"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0219" sboTerm="SBO:0000176" id="r_0219" name="aspartate-semialdehyde dehydrogenase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDR158W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0219"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02291"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/2570346"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0295" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1212" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0978" stoichiometry="1" constant="true"/> <speciesReference species="s_1207" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0186"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0220" sboTerm="SBO:0000176" id="r_0220" name="Aspartyl-tRNA synthetase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YLL018C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0220"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R05577"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/3902099"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_0973" stoichiometry="1" constant="true"/> <speciesReference species="s_1587" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0423" stoichiometry="1" constant="true"/> <speciesReference species="s_0432" stoichiometry="1" constant="true"/> <speciesReference species="s_0633" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0615"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0221" sboTerm="SBO:0000176" id="r_0221" name="Aspartyl-tRNA synthetase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YPL104W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0221"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R05577"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/2668951"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0437" stoichiometry="1" constant="true"/> <speciesReference species="s_0975" stoichiometry="1" constant="true"/> <speciesReference species="s_1588" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0424" stoichiometry="1" constant="true"/> <speciesReference species="s_0433" stoichiometry="1" constant="true"/> <speciesReference species="s_0636" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0919"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0222" sboTerm="SBO:0000176" id="r_0222" name="ATP adenylyltransferase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDR530C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0222"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00126"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0394" stoichiometry="1" constant="true"/> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1282" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0244"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000176" id="r_0223" name="ATP adenylyltransferase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YCL050C</p> </body> </notes> <listOfReactants> <speciesReference species="s_0394" stoichiometry="1" constant="true"/> <speciesReference species="s_0785" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1284" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0107"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000176" id="r_0224" name="ATP adenylyltransferase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YCL050C</p> </body> </notes> <listOfReactants> <speciesReference species="s_0739" stoichiometry="1" constant="true"/> <speciesReference species="s_0785" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1283" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0107"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0225" sboTerm="SBO:0000176" id="r_0225" name="ATP phosphoribosyltransferase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YER055C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0225"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01071"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_1386" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0326" stoichiometry="1" constant="true"/> <speciesReference species="s_0633" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0283"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0226" sboTerm="SBO:0000176" id="r_0226" name="ATP synthase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:((Q0130 AND YBL099W AND YDR298C AND Q0085 AND YJR121W AND Q0080 AND YBR039W AND YDR377W AND YML081C-A AND YDR322C-A AND YKL016C AND YPL271W AND YDL004W AND YPL078C AND YLR295C) OR (YPR020W AND Q0130 AND YBL099W AND YDR298C AND Q0085 AND YJR121W AND Q0080 AND YBR039W AND YDR377W AND YML081C-A AND YKL016C AND YPL271W AND YDL004W AND YPL078C AND YLR295C))</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0226"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/6223276"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0397" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="3" constant="true"/> <speciesReference species="s_1326" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0437" stoichiometry="1" constant="true"/> <speciesReference species="s_0799" stoichiometry="2" constant="true"/> <speciesReference species="s_0807" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0950"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0944"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0005"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0033"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0207"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0003"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0671"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0002"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0051"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0223"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0709"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0213"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0544"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0559"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0127"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0913"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0227" sboTerm="SBO:0000176" id="r_0227" name="ATPase, cytosolic" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YER005W OR (YCR024C-A AND YGL008C AND YEL017C-A) OR (YCR024C-A AND YPL036W AND YEL017C-A))</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0227"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/10409709"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0394" stoichiometry="1" constant="true"/> <speciesReference species="s_0796" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0115"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0906"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0327"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0248"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0270"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0228" sboTerm="SBO:0000176" id="r_0228" name="beta-1,4 mannosyltransferase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YBR110W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0228"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R04502"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/6368538"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0743" stoichiometry="1" constant="true"/> <speciesReference species="s_1184" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0443" stoichiometry="1" constant="true"/> <speciesReference species="s_0739" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0061"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000176" id="r_0229" name="biotin synthase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YGR286C</p> </body> </notes> <listOfReactants> <speciesReference species="s_0612" stoichiometry="1" constant="true"/> <speciesReference species="s_1371" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0451" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="2" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0413"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0230" sboTerm="SBO:0000176" id="r_0230" name="biotin-[acetyl-CoA-carboxylase] ligase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDL141W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0230"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01074"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/9688262"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_0451" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0453" stoichiometry="1" constant="true"/> <speciesReference species="s_0633" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0147"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0231" sboTerm="SBO:0000176" id="r_0231" name="C-14 sterol reductase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YNL280C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0231"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R05639"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0262" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1212" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0122" stoichiometry="1" constant="true"/> <speciesReference species="s_1207" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0800"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000176" id="r_0233" name="C-22 sterol desaturase (NADP)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YMR015C</p> </body> </notes> <listOfReactants> <speciesReference species="s_0664" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1212" stoichiometry="1" constant="true"/> <speciesReference species="s_1275" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0662" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="2" constant="true"/> <speciesReference species="s_1207" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0724"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000176" id="r_0234" name="C-3 sterol dehydrogenase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YGL001C</p> </body> </notes> <listOfReactants> <speciesReference species="s_1207" stoichiometry="1" constant="true"/> <speciesReference species="s_1578" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0456" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1212" stoichiometry="1" constant="true"/> <speciesReference species="s_1579" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0326"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000176" id="r_0235" name="C-3 sterol dehydrogenase (4-methylzymosterol)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YGL001C</p> </body> </notes> <listOfReactants> <speciesReference species="s_0297" stoichiometry="1" constant="true"/> <speciesReference species="s_1198" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0209" stoichiometry="1" constant="true"/> <speciesReference species="s_0456" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1203" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0326"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0236" sboTerm="SBO:0000176" id="r_0236" name="C-3 sterol keto reductase (4-methylzymosterol)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YLR100W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0236"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R07495"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0209" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1212" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0296" stoichiometry="1" constant="true"/> <speciesReference species="s_1207" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0644"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000176" id="r_0237" name="C-3 sterol keto reductase (zymosterol)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YLR100W</p> </body> </notes> <listOfReactants> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1212" stoichiometry="1" constant="true"/> <speciesReference species="s_1579" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1207" stoichiometry="1" constant="true"/> <speciesReference species="s_1569" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0644"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000176" id="r_0238" name="C-4 methyl sterol oxidase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YGR060W</p> </body> </notes> <listOfReactants> <speciesReference species="s_0296" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1212" stoichiometry="1" constant="true"/> <speciesReference species="s_1275" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> <speciesReference species="s_1207" stoichiometry="1" constant="true"/> <speciesReference species="s_1576" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0367"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000176" id="r_0239" name="C-4 methyl sterol oxidase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YGR060W</p> </body> </notes> <listOfReactants> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1212" stoichiometry="1" constant="true"/> <speciesReference species="s_1275" stoichiometry="1" constant="true"/> <speciesReference species="s_1576" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0803" stoichiometry="2" constant="true"/> <speciesReference species="s_1207" stoichiometry="1" constant="true"/> <speciesReference species="s_1577" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0367"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000176" id="r_0240" name="C-4 methyl sterol oxidase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YGR060W</p> </body> </notes> <listOfReactants> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1212" stoichiometry="1" constant="true"/> <speciesReference species="s_1275" stoichiometry="1" constant="true"/> <speciesReference species="s_1577" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> <speciesReference species="s_1207" stoichiometry="1" constant="true"/> <speciesReference species="s_1578" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0367"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0241" sboTerm="SBO:0000176" id="r_0241" name="C-4 sterol methyl oxidase (4,4-dimethylzymosterol)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YGR060W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0241"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R07509"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0122" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="3" constant="true"/> <speciesReference species="s_1212" stoichiometry="3" constant="true"/> <speciesReference species="s_1275" stoichiometry="3" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0297" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="4" constant="true"/> <speciesReference species="s_1207" stoichiometry="3" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0367"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000176" id="r_0242" name="C-5 sterol desaturase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YLR056W</p> </body> </notes> <listOfReactants> <speciesReference species="s_0657" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1212" stoichiometry="1" constant="true"/> <speciesReference species="s_1275" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0664" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="2" constant="true"/> <speciesReference species="s_1207" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0637"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0243" sboTerm="SBO:0000176" id="r_0243" name="C-8 sterol isomerase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YMR202W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0243"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R07497"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0700" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0657" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0742"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0244" sboTerm="SBO:0000176" id="r_0244" name="C-s24 sterol reductase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YGL012W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0244"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R05641"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0663" stoichiometry="1" constant="true"/> <speciesReference species="s_0795" stoichiometry="1" constant="true"/> <speciesReference species="s_1213" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0667" stoichiometry="1" constant="true"/> <speciesReference species="s_1208" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0329"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0249" sboTerm="SBO:0000176" id="r_0249" name="CAAX farnesyltransferase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YKL019W AND YDL090C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0249"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R07273"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/1763050"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0286" stoichiometry="1" constant="true"/> <speciesReference species="s_1231" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0633" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="2" constant="true"/> <speciesReference species="s_1230" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0560"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0140"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0250" sboTerm="SBO:0000176" id="r_0250" name="carbamoyl-phosphate synthase (glutamine-hydrolysing)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:((YJR109C AND YOR303W) OR YJL130C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0250"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00575"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0434" stoichiometry="2" constant="true"/> <speciesReference species="s_0445" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> <speciesReference species="s_0999" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0394" stoichiometry="2" constant="true"/> <speciesReference species="s_0455" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="2" constant="true"/> <speciesReference species="s_0991" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0508"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0542"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0888"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0252" sboTerm="SBO:0000176" id="r_0252" name="carnitine O-acetyltransferase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YER024W OR YAR035W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0252"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/11329169"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0021" stoichiometry="1" constant="true"/> <speciesReference species="s_0373" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0529" stoichiometry="1" constant="true"/> <speciesReference species="s_1235" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0018"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0277"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000176" id="r_0253" name="carnitine O-acetyltransferase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YML042W</p> </body> </notes> <listOfReactants> <speciesReference species="s_0024" stoichiometry="1" constant="true"/> <speciesReference species="s_0378" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0534" stoichiometry="1" constant="true"/> <speciesReference species="s_1237" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0703"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0254" sboTerm="SBO:0000176" id="r_0254" name="carnitine O-acetyltransferase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YML042W</p> </body> </notes> <listOfReactants> <speciesReference species="s_0532" stoichiometry="1" constant="true"/> <speciesReference species="s_1236" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0023" stoichiometry="1" constant="true"/> <speciesReference species="s_0376" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0702"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0255" sboTerm="SBO:0000176" id="r_0255" name="catalase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YGR088W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0255"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/3536508"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0837" stoichiometry="2" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0803" stoichiometry="2" constant="true"/> <speciesReference species="s_1275" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0371"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0256" sboTerm="SBO:0000176" id="r_0256" name="catalase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDR256C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0256"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/9931255"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0840" stoichiometry="2" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0809" stoichiometry="2" constant="true"/> <speciesReference species="s_1279" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0199"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0259" sboTerm="SBO:0000176" id="r_0259" name="ceramide-1 hydroxylase (24C)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDR297W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0259"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/18296751"/> <rdf:li rdf:resource="http://identifiers.org/pubmed/9368039"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0475" stoichiometry="1" constant="true"/> <speciesReference species="s_0795" stoichiometry="1" constant="true"/> <speciesReference species="s_1213" stoichiometry="1" constant="true"/> <speciesReference species="s_1276" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0481" stoichiometry="1" constant="true"/> <speciesReference species="s_0804" stoichiometry="1" constant="true"/> <speciesReference species="s_1208" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0206"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0260" sboTerm="SBO:0000176" id="r_0260" name="ceramide-1 hydroxylase (24C)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YMR272C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0260"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/18296751"/> <rdf:li rdf:resource="http://identifiers.org/pubmed/9368039"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0475" stoichiometry="1" constant="true"/> <speciesReference species="s_0795" stoichiometry="1" constant="true"/> <speciesReference species="s_1213" stoichiometry="1" constant="true"/> <speciesReference species="s_1276" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0487" stoichiometry="1" constant="true"/> <speciesReference species="s_0804" stoichiometry="1" constant="true"/> <speciesReference species="s_1208" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0756"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0261" sboTerm="SBO:0000176" id="r_0261" name="ceramide-1 hydroxylase (26C)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDR297W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0261"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/18296751"/> <rdf:li rdf:resource="http://identifiers.org/pubmed/9368039"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0478" stoichiometry="1" constant="true"/> <speciesReference species="s_0795" stoichiometry="1" constant="true"/> <speciesReference species="s_1213" stoichiometry="1" constant="true"/> <speciesReference species="s_1276" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0484" stoichiometry="1" constant="true"/> <speciesReference species="s_0804" stoichiometry="1" constant="true"/> <speciesReference species="s_1208" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0206"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0262" sboTerm="SBO:0000176" id="r_0262" name="ceramide-1 hydroxylase (26C)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YMR272C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0262"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/18296751"/> <rdf:li rdf:resource="http://identifiers.org/pubmed/9368039"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0478" stoichiometry="1" constant="true"/> <speciesReference species="s_0795" stoichiometry="1" constant="true"/> <speciesReference species="s_1213" stoichiometry="1" constant="true"/> <speciesReference species="s_1276" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0490" stoichiometry="1" constant="true"/> <speciesReference species="s_0804" stoichiometry="1" constant="true"/> <speciesReference species="s_1208" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0756"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0263" sboTerm="SBO:0000176" id="r_0263" name="ceramide-1 synthase (24C)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:((YKL008C AND YMR298W) OR (YHL003C AND YMR298W))</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0263"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/11387200"/> <rdf:li rdf:resource="http://identifiers.org/pubmed/15692566"/> <rdf:li rdf:resource="http://identifiers.org/pubmed/18296751"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_1445" stoichiometry="1" constant="true"/> <speciesReference species="s_1480" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0475" stoichiometry="1" constant="true"/> <speciesReference species="s_0530" stoichiometry="1" constant="true"/> <speciesReference species="s_0795" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0558"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0417"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0762"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0264" sboTerm="SBO:0000176" id="r_0264" name="ceramide-1 synthase (26C)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:((YKL008C AND YMR298W) OR (YHL003C AND YMR298W))</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0264"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R06517"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/11387200"/> <rdf:li rdf:resource="http://identifiers.org/pubmed/15692566"/> <rdf:li rdf:resource="http://identifiers.org/pubmed/18296751"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0817" stoichiometry="1" constant="true"/> <speciesReference species="s_1445" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0478" stoichiometry="1" constant="true"/> <speciesReference species="s_0530" stoichiometry="1" constant="true"/> <speciesReference species="s_0795" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0558"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0417"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0762"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0265" sboTerm="SBO:0000176" id="r_0265" name="ceramide-2 synthase (24C)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:((YKL008C AND YMR298W) OR (YHL003C AND YMR298W))</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0265"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/11387200"/> <rdf:li rdf:resource="http://identifiers.org/pubmed/15692566"/> <rdf:li rdf:resource="http://identifiers.org/pubmed/18296751"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_1366" stoichiometry="1" constant="true"/> <speciesReference species="s_1480" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0481" stoichiometry="1" constant="true"/> <speciesReference species="s_0530" stoichiometry="1" constant="true"/> <speciesReference species="s_0795" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0558"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0417"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0762"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0266" sboTerm="SBO:0000176" id="r_0266" name="ceramide-2 synthase (26C)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:((YKL008C AND YMR298W) OR (YHL003C AND YMR298W))</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0266"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R06527"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/11387200"/> <rdf:li rdf:resource="http://identifiers.org/pubmed/15692566"/> <rdf:li rdf:resource="http://identifiers.org/pubmed/18296751"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0817" stoichiometry="1" constant="true"/> <speciesReference species="s_1366" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0484" stoichiometry="1" constant="true"/> <speciesReference species="s_0530" stoichiometry="1" constant="true"/> <speciesReference species="s_0795" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0558"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0417"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0762"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0267" sboTerm="SBO:0000176" id="r_0267" name="ceramide-3 synthase (24C)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YMR272C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0267"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/18296751"/> <rdf:li rdf:resource="http://identifiers.org/pubmed/9368039"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0481" stoichiometry="1" constant="true"/> <speciesReference species="s_0795" stoichiometry="1" constant="true"/> <speciesReference species="s_1213" stoichiometry="1" constant="true"/> <speciesReference species="s_1276" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0493" stoichiometry="1" constant="true"/> <speciesReference species="s_0804" stoichiometry="1" constant="true"/> <speciesReference species="s_1208" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0756"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0268" sboTerm="SBO:0000176" id="r_0268" name="ceramide-3 synthase (26C)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YMR272C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0268"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/18296751"/> <rdf:li rdf:resource="http://identifiers.org/pubmed/9368039"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0484" stoichiometry="1" constant="true"/> <speciesReference species="s_0795" stoichiometry="1" constant="true"/> <speciesReference species="s_1213" stoichiometry="1" constant="true"/> <speciesReference species="s_1276" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0496" stoichiometry="1" constant="true"/> <speciesReference species="s_0804" stoichiometry="1" constant="true"/> <speciesReference species="s_1208" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0756"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0269" sboTerm="SBO:0000176" id="r_0269" name="ceramide-4 synthase (24C)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YMR272C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0269"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/18296751"/> <rdf:li rdf:resource="http://identifiers.org/pubmed/9368039"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0493" stoichiometry="1" constant="true"/> <speciesReference species="s_0795" stoichiometry="1" constant="true"/> <speciesReference species="s_1213" stoichiometry="1" constant="true"/> <speciesReference species="s_1276" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0499" stoichiometry="1" constant="true"/> <speciesReference species="s_0804" stoichiometry="1" constant="true"/> <speciesReference species="s_1208" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0756"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0270" sboTerm="SBO:0000176" id="r_0270" name="ceramide-4 synthase (26C)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YMR272C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0270"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/18296751"/> <rdf:li rdf:resource="http://identifiers.org/pubmed/9368039"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0496" stoichiometry="1" constant="true"/> <speciesReference species="s_0795" stoichiometry="1" constant="true"/> <speciesReference species="s_1213" stoichiometry="1" constant="true"/> <speciesReference species="s_1276" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0502" stoichiometry="1" constant="true"/> <speciesReference species="s_0804" stoichiometry="1" constant="true"/> <speciesReference species="s_1208" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0756"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0271" sboTerm="SBO:0000176" id="r_0271" name="chitin deacetylase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YLR307W OR YLR308W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0271"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02333"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0509" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0362" stoichiometry="1" constant="true"/> <speciesReference species="s_0510" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0679"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0678"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0272" sboTerm="SBO:0000176" id="r_0272" name="chitin synthase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YBR038W OR YNL192W OR YBR023C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0272"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02335"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/16408321"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_1544" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0509" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1538" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0043"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0789"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0050"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0273" sboTerm="SBO:0000176" id="r_0273" name="choline kinase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YLR133W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0273"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01021"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/10329685"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_0512" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0394" stoichiometry="1" constant="true"/> <speciesReference species="s_0514" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0646"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0274" sboTerm="SBO:0000176" id="r_0274" name="choline phosphate cytididyltransferase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YGR202C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0274"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01890"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0514" stoichiometry="1" constant="true"/> <speciesReference species="s_0539" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0469" stoichiometry="1" constant="true"/> <speciesReference species="s_0633" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0395"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0278" sboTerm="SBO:0000176" id="r_0278" name="chorismate mutase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YPR060C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0278"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01715"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/3027508"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0515" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1377" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0959"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0279" sboTerm="SBO:0000176" id="r_0279" name="chorismate synthase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YGL148W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0279"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01714"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/8971708"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0324" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0515" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0342"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0280" sboTerm="SBO:0000176" id="r_0280" name="cis-aconitate(3-) to isocitrate" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YLR304C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0280"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01900"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/21623372"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0517" stoichiometry="1" constant="true"/> <speciesReference species="s_0807" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0941" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0676"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0281" sboTerm="SBO:0000176" id="r_0281" name="cis-prenyltransferase step 01" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YBR002C OR YMR101C)</p> </body> </notes> <annotation> <rdf:RDF> 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<speciesReference species="s_0635" stoichiometry="1" constant="true"/> <speciesReference species="s_0815" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0732"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0034"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0285" sboTerm="SBO:0000176" id="r_0285" name="cis-prenyltransferase step 05" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YBR002C OR YMR101C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0285"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R05611"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/12702274"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0815" 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sboTerm="SBO:0000176" id="r_0291" name="cis-prenyltransferase step 11" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YBR002C OR YMR101C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0291"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/12702274"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0944" stoichiometry="1" constant="true"/> <speciesReference species="s_1523" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0635" stoichiometry="1" constant="true"/> <speciesReference species="s_1483" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0732"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0034"/> </listOfModifiers> </reaction> 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<modifierSpeciesReference sboTerm="SBO:0000460" species="e_0732"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0034"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0296" sboTerm="SBO:0000176" id="r_0296" name="cis-prenyltransferase step 16" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YBR002C OR YMR101C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0296"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/12702274"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0944" stoichiometry="1" constant="true"/> <speciesReference species="s_1246" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0635" stoichiometry="1" constant="true"/> <speciesReference species="s_1229" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0732"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0034"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0297" sboTerm="SBO:0000176" id="r_0297" name="cis-prenyltransferase step 17" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YBR002C OR YMR101C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0297"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/12702274"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0944" stoichiometry="1" constant="true"/> <speciesReference species="s_1229" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0635" stoichiometry="1" constant="true"/> <speciesReference species="s_0845" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0732"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0034"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0298" sboTerm="SBO:0000176" id="r_0298" name="cis-prenyltransferase step 18" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YBR002C OR YMR101C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0298"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/12702274"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0845" stoichiometry="1" constant="true"/> <speciesReference species="s_0944" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0635" stoichiometry="1" constant="true"/> <speciesReference species="s_0813" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0732"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0034"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0299" sboTerm="SBO:0000176" id="r_0299" name="cis-prenyltransferase step 19" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YBR002C OR YMR101C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0299"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/12702274"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0813" stoichiometry="1" constant="true"/> <speciesReference species="s_0944" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0635" stoichiometry="1" constant="true"/> <speciesReference species="s_0640" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0732"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0034"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0300" sboTerm="SBO:0000176" id="r_0300" name="citrate synthase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YNR001C OR YPR001W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0300"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/9140965"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0376" stoichiometry="1" constant="true"/> <speciesReference species="s_0807" stoichiometry="1" constant="true"/> <speciesReference species="s_1273" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0524" stoichiometry="1" constant="true"/> <speciesReference species="s_0532" stoichiometry="1" constant="true"/> <speciesReference species="s_0799" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0947"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0805"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0301" sboTerm="SBO:0000176" id="r_0301" name="citrate synthase, peroxisomal" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YCR005C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0301"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/10587442"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0378" stoichiometry="1" constant="true"/> <speciesReference species="s_0809" stoichiometry="1" constant="true"/> <speciesReference species="s_1274" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0525" stoichiometry="1" constant="true"/> <speciesReference species="s_0534" stoichiometry="1" constant="true"/> <speciesReference species="s_0801" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0111"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0302" sboTerm="SBO:0000176" id="r_0302" name="citrate to cis-aconitate(3-)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YLR304C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0302"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01325"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/21623372"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0524" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0517" stoichiometry="1" constant="true"/> <speciesReference species="s_0807" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0676"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0303" sboTerm="SBO:0000176" id="r_0303" name="citrate to cis-aconitate(3-), cytoplasmic" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YLR304C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0303"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01325"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0522" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0516" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0675"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0304" sboTerm="SBO:0000176" id="r_0304" name="coproporphyrinogen oxidase (O2 required)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDR044W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0304"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03220"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0538" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="2" constant="true"/> <speciesReference species="s_1275" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0456" stoichiometry="2" constant="true"/> <speciesReference species="s_0803" stoichiometry="2" constant="true"/> <speciesReference species="s_1384" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0172"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0306" sboTerm="SBO:0000176" id="r_0306" name="CTP synthase (glutamine)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YBL039C OR YJR103W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0306"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00573"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> <speciesReference species="s_0999" stoichiometry="1" constant="true"/> <speciesReference species="s_1559" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0394" stoichiometry="1" constant="true"/> <speciesReference species="s_0539" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="2" constant="true"/> <speciesReference species="s_0991" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0540"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0026"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000176" id="r_0307" name="CTP synthase (NH3)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YBL039C OR YJR103W)</p> </body> </notes> <listOfReactants> <speciesReference species="s_0419" stoichiometry="1" constant="true"/> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_1559" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0394" stoichiometry="1" constant="true"/> <speciesReference species="s_0539" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="2" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0540"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0026"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0308" sboTerm="SBO:0000176" id="r_0308" name="cystathionine b-lyase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YGL184C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0308"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/10922376"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> <speciesReference species="s_0980" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0419" stoichiometry="1" constant="true"/> <speciesReference species="s_1012" stoichiometry="1" constant="true"/> <speciesReference species="s_1399" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0344"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0309" sboTerm="SBO:0000176" id="r_0309" name="cystathionine beta-synthase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YGR155W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0309"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01290"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/10766767"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_1012" stoichiometry="1" constant="true"/> <speciesReference species="s_1039" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> <speciesReference species="s_0980" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0380"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0310" sboTerm="SBO:0000176" id="r_0310" name="cystathionine g-lyase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YAL012W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0310"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/1577698"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> <speciesReference species="s_0980" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0178" stoichiometry="1" constant="true"/> <speciesReference species="s_0419" stoichiometry="1" constant="true"/> <speciesReference species="s_0981" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0008"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0311" sboTerm="SBO:0000176" id="r_0311" name="cystathionine gamma-synthase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YJR130C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0311"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03217"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/10821189"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0981" stoichiometry="1" constant="true"/> <speciesReference species="s_1233" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0362" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_0980" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0545"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0312" sboTerm="SBO:0000176" id="r_0312" name="cysteine synthase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YLR303W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0312"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00897"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/21623372"/> <rdf:li rdf:resource="http://identifiers.org/pubmed/7765825"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0841" stoichiometry="1" constant="true"/> <speciesReference species="s_1234" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0362" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_0981" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0674"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0313" sboTerm="SBO:0000176" id="r_0313" name="cysteinyl-tRNA synthetase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YNL247W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0313"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03650"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/9523015"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_0981" stoichiometry="1" constant="true"/> <speciesReference species="s_1589" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0423" stoichiometry="1" constant="true"/> <speciesReference species="s_0542" stoichiometry="1" constant="true"/> <speciesReference species="s_0633" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0793"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000176" id="r_0314" name="cytidine deaminase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YLR245C</p> </body> </notes> <listOfReactants> <speciesReference species="s_0543" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0419" stoichiometry="1" constant="true"/> <speciesReference species="s_1556" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0666"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0315" sboTerm="SBO:0000176" id="r_0315" name="cytidine kinase (GTP)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YNR012W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0315"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00517"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0543" stoichiometry="1" constant="true"/> <speciesReference species="s_0785" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0526" stoichiometry="1" constant="true"/> <speciesReference species="s_0739" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0806"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0317" sboTerm="SBO:0000176" id="r_0317" name="cytochrome P450 lanosterol 14-alpha-demethylase (NADP)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YHR042W AND YHR007C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0317"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R05640"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/10622712"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0794" stoichiometry="2" constant="true"/> <speciesReference species="s_1059" stoichiometry="1" constant="true"/> <speciesReference species="s_1212" stoichiometry="3" constant="true"/> <speciesReference species="s_1275" stoichiometry="3" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0262" stoichiometry="1" constant="true"/> <speciesReference species="s_0722" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="4" constant="true"/> <speciesReference species="s_1207" stoichiometry="3" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0434"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0424"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000176" id="r_0318" name="cytosine deaminase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YPR062W</p> </body> </notes> <listOfReactants> <speciesReference species="s_0545" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0419" stoichiometry="1" constant="true"/> <speciesReference species="s_1550" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0960"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0319" sboTerm="SBO:0000176" id="r_0319" name="D-arabinono-1,4-lactone oxidase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YML086C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0319"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02715"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/10508108"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0547" stoichiometry="1" constant="true"/> <speciesReference species="s_1275" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0607" stoichiometry="1" constant="true"/> <speciesReference species="s_0837" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0710"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0320" sboTerm="SBO:0000176" id="r_0320" name="D-arabinose 1-dehydrogenase (NAD)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YMR041C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0320"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01574"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/17097644"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0548" stoichiometry="1" constant="true"/> <speciesReference species="s_1198" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0547" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1203" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0726"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0321" sboTerm="SBO:0000176" id="r_0321" name="D-arabinose 1-dehydrogenase (NADP)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YBR149W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0321"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01575"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0548" stoichiometry="1" constant="true"/> <speciesReference species="s_1207" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0547" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1212" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0070"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0322" sboTerm="SBO:0000176" id="r_0322" name="D-fructose 1-phosphate D-glyceraldehyde-3-phosphate-lyase" reversible="true" fast="false"> <notes> <body 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</reaction> <reaction metaid="meta_r_0347" sboTerm="SBO:0000176" id="r_0347" name="dihydroneopterin aldolase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YNL256W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0347"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03504"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0344" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0148" stoichiometry="1" constant="true"/> <speciesReference species="s_0777" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0794"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0348" sboTerm="SBO:0000176" id="r_0348" name="dihydroneopterin monophosphate dephosphorylase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDL100C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0348"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R04621"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0345" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0343" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0143"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0349" sboTerm="SBO:0000176" id="r_0349" name="dihydroorotase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YLR420W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0349"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01993"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/2897615"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0061" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1194" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0692"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0350" sboTerm="SBO:0000176" id="r_0350" name="dihydropteroate synthase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YNL256W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0350"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03066"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0148" stoichiometry="1" constant="true"/> <speciesReference species="s_0273" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0348" stoichiometry="1" constant="true"/> <speciesReference species="s_0807" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0794"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0351" sboTerm="SBO:0000176" id="r_0351" name="dihydropteroate synthase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YNL256W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0351"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03067"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0006" stoichiometry="1" constant="true"/> <speciesReference species="s_0273" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0348" stoichiometry="1" constant="true"/> <speciesReference species="s_0636" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0794"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0352" sboTerm="SBO:0000176" id="r_0352" name="dihydroxy-acid dehydratase (2,3-dihydroxy-3-methylbutanoate)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YJR016C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0352"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R04441"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/14576278"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0016" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0233" stoichiometry="1" constant="true"/> <speciesReference species="s_0807" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0528"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0353" sboTerm="SBO:0000176" id="r_0353" name="dihydroxy-acid dehydratase (2,3-dihydroxy-3-methylpentanoate)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YJR016C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0353"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R05070"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/14576278"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0008" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0060" stoichiometry="1" constant="true"/> <speciesReference species="s_0807" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0528"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0354" sboTerm="SBO:0000176" id="r_0354" name="dihydroxyacetone kinase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YFL053W OR YML070W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0354"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01011"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_0771" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0394" stoichiometry="1" constant="true"/> <speciesReference species="s_0629" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0707"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0315"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0355" sboTerm="SBO:0000176" id="r_0355" name="dimethylallyltranstransferase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YJL167W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0355"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01658"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0943" stoichiometry="1" constant="true"/> <speciesReference species="s_1376" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0633" stoichiometry="1" constant="true"/> <speciesReference species="s_0745" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0515"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0356" sboTerm="SBO:0000176" id="r_0356" name="diphosphoglyceromutase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YKL152C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0356"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01662"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/6313356"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0075" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0140" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0582"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0357" sboTerm="SBO:0000176" id="r_0357" name="diphosphoinositol-1,3,4,6-tetrakisphosphate diphosphohydrolase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YOR163W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0357"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/10419486"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0309" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="3" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0794" stoichiometry="6" constant="true"/> <speciesReference species="s_1156" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="3" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0866"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0358" sboTerm="SBO:0000176" id="r_0358" name="diphosphoinositol-1,3,4,6-tetrakisphosphate synthase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDR017C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0358"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/11956213"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="5" constant="true"/> <speciesReference species="s_1156" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="2" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0309" stoichiometry="1" constant="true"/> <speciesReference species="s_0394" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="2" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0166"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0359" sboTerm="SBO:0000176" id="r_0359" name="diphthine synthase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YLR172C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0359"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R04481"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/1508200"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0143" stoichiometry="1" constant="true"/> <speciesReference species="s_1416" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0144" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1413" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0657"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0360" sboTerm="SBO:0000176" id="r_0360" name="dolichol kinase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YMR013C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0360"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01018"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0539" stoichiometry="1" constant="true"/> <speciesReference species="s_0642" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0467" stoichiometry="1" constant="true"/> <speciesReference species="s_0645" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0723"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0361" sboTerm="SBO:0000176" id="r_0361" name="dolichyl-phosphate D-mannosyltransferase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YPR183W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0361"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01009"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0645" stoichiometry="1" constant="true"/> <speciesReference species="s_0743" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0644" stoichiometry="1" constant="true"/> <speciesReference species="s_0739" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0976"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000176" id="r_0362" name="dolichyl-phosphate-mannose--protein mannosyltransferase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YOR321W OR (YAL023C AND YDL095W) OR YJR143C OR YDL093W)</p> </body> </notes> <listOfReactants> <speciesReference species="s_0644" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0646" stoichiometry="1" constant="true"/> <speciesReference species="s_0795" stoichiometry="1" constant="true"/> <speciesReference species="s_1108" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0141"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0549"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0010"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0890"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0142"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0363" sboTerm="SBO:0000176" id="r_0363" name="dTMP kinase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YJR057W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0363"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02094"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_0649" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0394" stoichiometry="1" constant="true"/> <speciesReference species="s_0647" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0535"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0364" sboTerm="SBO:0000176" id="r_0364" name="dUTP diphosphatase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YBR252W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0364"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02100"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0656" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0633" stoichiometry="1" constant="true"/> <speciesReference species="s_0654" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0089"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0365" sboTerm="SBO:0000176" id="r_0365" name="endopolygalacturonase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YJR153W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0365"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/10028181"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0805" stoichiometry="1" constant="true"/> <speciesReference species="s_1309" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0560" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0552"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0366" sboTerm="SBO:0000176" id="r_0366" name="enolase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YHR174W OR YGR254W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0366"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00658"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/7520111"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0188" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> <speciesReference species="s_1360" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0405"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0454"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0368" sboTerm="SBO:0000176" id="r_0368" name="ethanolamine kinase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YDR147W OR YLR133W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0368"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01468"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/9506987"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_0683" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0394" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1239" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0646"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0184"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0369" sboTerm="SBO:0000176" id="r_0369" name="ethyl acetate-hydrolyzing esterase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YOR126C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0369"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/10855721"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0685" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0362" stoichiometry="1" constant="true"/> <speciesReference species="s_0680" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0859"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0370" sboTerm="SBO:0000176" id="r_0370" name="exo-1,3-beta-glucan glucohydrase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YNR067C OR YLR300W OR YDR261C OR YGR282C OR YOR190W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0370"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00308"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/8458852"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0003" stoichiometry="1" constant="true"/> <speciesReference species="s_0805" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0565" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0873"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0673"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0200"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0412"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0817"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0373" sboTerm="SBO:0000176" id="r_0373" name="farnesyltranstransferase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YPL069C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0373"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02061"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/7665600"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0190" stoichiometry="1" constant="true"/> <speciesReference species="s_0943" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0189" stoichiometry="1" constant="true"/> <speciesReference species="s_0633" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0912"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000176" id="r_0399" name="fatty-acid--CoA ligase (decanoate)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YER015W</p> </body> </notes> <listOfReactants> <speciesReference species="s_0439" stoichiometry="1" constant="true"/> <speciesReference species="s_0534" stoichiometry="1" constant="true"/> <speciesReference species="s_0600" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0426" stoichiometry="1" constant="true"/> <speciesReference species="s_0605" stoichiometry="1" constant="true"/> <speciesReference species="s_0638" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0273"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000176" id="r_0400" name="fatty-acid--CoA ligase (dodecanoate)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YER015W</p> </body> </notes> <listOfReactants> <speciesReference species="s_0439" stoichiometry="1" constant="true"/> <speciesReference species="s_0534" stoichiometry="1" constant="true"/> <speciesReference species="s_1070" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0426" stoichiometry="1" constant="true"/> <speciesReference species="s_0638" stoichiometry="1" constant="true"/> <speciesReference species="s_1076" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0273"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0402" sboTerm="SBO:0000176" id="r_0402" name="fatty-acid--CoA ligase (hexadecanoate)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YER015W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0402"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01280"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0439" stoichiometry="1" constant="true"/> <speciesReference species="s_0534" stoichiometry="1" constant="true"/> <speciesReference species="s_1291" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0426" stoichiometry="1" constant="true"/> <speciesReference species="s_0638" stoichiometry="1" constant="true"/> <speciesReference species="s_1305" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0273"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000176" id="r_0410" name="fatty-acid--CoA ligase (octanoate)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YER015W</p> </body> </notes> <listOfReactants> <speciesReference species="s_0439" stoichiometry="1" constant="true"/> <speciesReference species="s_0534" stoichiometry="1" constant="true"/> <speciesReference species="s_1253" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0426" stoichiometry="1" constant="true"/> <speciesReference species="s_0638" stoichiometry="1" constant="true"/> <speciesReference species="s_1258" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0273"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000176" id="r_0412" name="fatty-acid--CoA ligase (tetradecanoate)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YER015W</p> </body> </notes> <listOfReactants> <speciesReference species="s_0439" stoichiometry="1" constant="true"/> <speciesReference species="s_0534" stoichiometry="1" constant="true"/> <speciesReference species="s_1166" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0426" stoichiometry="1" constant="true"/> <speciesReference species="s_0638" stoichiometry="1" constant="true"/> <speciesReference species="s_1179" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0273"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0436" sboTerm="SBO:0000176" id="r_0436" name="ferrochelatase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YOR176W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0436"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00310"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0926" stoichiometry="1" constant="true"/> <speciesReference species="s_1383" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0712" stoichiometry="1" constant="true"/> <speciesReference species="s_0799" stoichiometry="2" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0870"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0437" sboTerm="SBO:0000176" id="r_0437" name="ferrocytochrome-c:hydrogen-peroxide oxidoreductase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:((YKR066C AND YEL039C) OR (YKR066C AND YJR048W))</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0437"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00017"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0710" stoichiometry="2" constant="true"/> <speciesReference species="s_0838" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0709" stoichiometry="2" constant="true"/> <speciesReference species="s_0807" stoichiometry="2" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0605"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0532"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0256"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0438" sboTerm="SBO:0000176" id="r_0438" name="ferrocytochrome-c:oxygen oxidoreductase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:((YLR038C AND Q0275 AND YHR051W AND YDL067C AND Q0045 AND YGL191W AND Q0250 AND YLR395C AND YMR256C AND YJR048W AND YGL187C AND YIL111W) OR (YLR038C AND Q0275 AND YHR051W AND YDL067C AND Q0045 AND YGL191W AND YEL039C AND Q0250 AND YLR395C AND YMR256C AND YGL187C AND YIL111W) OR (YLR038C AND Q0275 AND YNL052W AND YHR051W AND YDL067C AND Q0045 AND YGL191W AND Q0250 AND YLR395C AND YMR256C AND YJR048W AND YGL187C) OR (YLR038C AND Q0275 AND YNL052W AND YHR051W AND YDL067C AND Q0045 AND YGL191W AND YEL039C AND Q0250 AND YLR395C AND YMR256C AND YGL187C))</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0438"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00081"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0710" stoichiometry="4" constant="true"/> <speciesReference species="s_0799" stoichiometry="2" constant="true"/> <speciesReference species="s_1278" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0709" stoichiometry="4" constant="true"/> <speciesReference species="s_0794" stoichiometry="2" constant="true"/> <speciesReference species="s_0807" stoichiometry="2" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0632"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0007"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0774"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0436"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0136"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0001"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0347"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0255"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0752"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0690"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0006"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0531"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0346"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0475"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000176" id="r_0439" name="ferrocytochrome-c:oxygen oxidoreductase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:((YJL166W AND YHR001W-A AND YEL024W AND YDR529C AND YGR183C AND YPR191W AND YOR065W AND YBL045C AND YFR033C AND YJR048W AND Q0105) OR (YJL166W AND YEL039C AND YHR001W-A AND YEL024W AND YDR529C AND YGR183C AND YPR191W AND YOR065W AND YBL045C AND YFR033C AND Q0105))</p> </body> </notes> <listOfReactants> <speciesReference species="s_0709" stoichiometry="2" constant="true"/> <speciesReference species="s_0799" stoichiometry="1.5" constant="true"/> <speciesReference species="s_1535" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0710" stoichiometry="2" constant="true"/> <speciesReference species="s_0794" stoichiometry="1.5" constant="true"/> <speciesReference species="s_1537" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0514"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0978"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0422"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0250"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0004"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0243"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0389"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0255"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0848"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0028"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0531"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0322"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0440" sboTerm="SBO:0000176" id="r_0440" name="FMN adenylyltransferase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDL045C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0440"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00161"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_0714" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0633" stoichiometry="1" constant="true"/> <speciesReference species="s_0687" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0131"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0441" sboTerm="SBO:0000176" id="r_0441" name="FMN reductase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YLR011W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0441"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R05705"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/15184374"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0714" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1203" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0717" stoichiometry="1" constant="true"/> <speciesReference species="s_1198" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0626"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0442" sboTerm="SBO:0000176" id="r_0442" name="FMN reductase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YLR011W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0442"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R05706"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/15184374"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0714" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1212" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0717" stoichiometry="1" constant="true"/> <speciesReference species="s_1207" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0626"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000176" id="r_0443" name="formaldehyde dehydrogenase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDL168W</p> </body> </notes> <listOfReactants> <speciesReference species="s_0721" stoichiometry="1" constant="true"/> <speciesReference species="s_0750" stoichiometry="1" constant="true"/> <speciesReference species="s_1198" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1203" stoichiometry="1" constant="true"/> <speciesReference species="s_1421" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0149"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0445" sboTerm="SBO:0000176" id="r_0445" name="formate dehydrogenase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YOR388C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0445"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00519"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0722" stoichiometry="1" constant="true"/> <speciesReference species="s_1198" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0456" stoichiometry="1" constant="true"/> <speciesReference species="s_1203" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0901"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0446" sboTerm="SBO:0000176" id="r_0446" name="formate-tetrahydrofolate ligase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YGR204W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0446"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00943"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/10871621"/> <rdf:li rdf:resource="http://identifiers.org/pubmed/1916088"/> <rdf:li rdf:resource="http://identifiers.org/pubmed/8852837"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_0722" stoichiometry="1" constant="true"/> <speciesReference species="s_1487" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0120" stoichiometry="1" constant="true"/> <speciesReference species="s_0394" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0396"/> </listOfModifiers> </reaction> 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<speciesReference species="s_0121" stoichiometry="1" constant="true"/> <speciesReference species="s_0397" stoichiometry="1" constant="true"/> <speciesReference species="s_1326" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0057"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0448" sboTerm="SBO:0000176" id="r_0448" name="fructose-2,6-bisphosphate 2-phosphatase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YJL155C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0448"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00763"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0442" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0557" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0513"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0449" sboTerm="SBO:0000176" id="r_0449" name="fructose-bisphosphatase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YLR377C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0449"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00762"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0555" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0557" stoichiometry="1" 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<listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0567"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0451" sboTerm="SBO:0000176" id="r_0451" name="fumarase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YPL262W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0451"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01082"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/9627400"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0727" stoichiometry="1" constant="true"/> <speciesReference species="s_0807" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0068" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0941"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0452" sboTerm="SBO:0000176" id="r_0452" name="fumarase, cytoplasmic" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YPL262W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0452"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01082"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/11585823"/> <rdf:li rdf:resource="http://identifiers.org/pubmed/20231875"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0725" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0066" stoichiometry="1" 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<listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0977"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0464" sboTerm="SBO:0000176" id="r_0464" name="glucan 1,4-alpha-glucosidase, vacuole" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YIL099W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0464"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/11486014"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0774" stoichiometry="1" constant="true"/> <speciesReference species="s_0810" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0566" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0473"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0465" sboTerm="SBO:0000176" id="r_0465" name="glucosamine-6-phosphate deaminase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0465"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/369615"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0412" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0419" stoichiometry="1" constant="true"/> <speciesReference species="s_0557" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="meta_r_0466" sboTerm="SBO:0000176" id="r_0466" name="glucose 6-phosphate dehydrogenase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YNL241C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0466"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00835"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/2269430"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0568" stoichiometry="1" constant="true"/> <speciesReference species="s_1207" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0335" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1212" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0792"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0467" sboTerm="SBO:0000176" id="r_0467" name="glucose-6-phosphate isomerase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YBR196C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0467"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00771"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/8435847"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0568" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0557" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0079"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0468" sboTerm="SBO:0000176" id="r_0468" name="glutamate 5-kinase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDR300C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0468"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00239"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_0991" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0394" stoichiometry="1" constant="true"/> <speciesReference species="s_0986" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0208"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0469" sboTerm="SBO:0000176" id="r_0469" name="glutamate decarboxylase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YMR250W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0469"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00261"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/11031268"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_0991" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0456" stoichiometry="1" constant="true"/> <speciesReference species="s_0734" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0751"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0470" sboTerm="SBO:0000176" id="r_0470" name="glutamate dehydrogenase (NAD)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDL215C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0470"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/14554197"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> <speciesReference species="s_0991" stoichiometry="1" constant="true"/> <speciesReference species="s_1198" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0180" stoichiometry="1" constant="true"/> <speciesReference species="s_0419" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1203" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0160"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000176" id="r_0471" name="glutamate dehydrogenase (NADP)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YOR375C OR YAL062W)</p> </body> </notes> <listOfReactants> <speciesReference species="s_0180" stoichiometry="1" constant="true"/> <speciesReference species="s_0419" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1212" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> <speciesReference species="s_0991" stoichiometry="1" constant="true"/> <speciesReference species="s_1207" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0016"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0899"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0472" sboTerm="SBO:0000176" id="r_0472" name="glutamate synthase (NADH2)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDL171C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0472"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00093"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/9657994"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0180" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_0999" stoichiometry="1" constant="true"/> <speciesReference species="s_1203" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0991" stoichiometry="2" constant="true"/> <speciesReference species="s_1198" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0150"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0473" sboTerm="SBO:0000176" id="r_0473" name="glutamate-5-semialdehyde dehydrogenase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YOR323C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0473"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03313"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_0986" stoichiometry="1" constant="true"/> <speciesReference species="s_1212" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0997" stoichiometry="1" constant="true"/> <speciesReference species="s_1207" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0891"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0475" sboTerm="SBO:0000176" id="r_0475" name="glutaminase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0475"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/3309138"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> <speciesReference species="s_0999" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0419" stoichiometry="1" constant="true"/> <speciesReference species="s_0991" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="meta_r_0476" sboTerm="SBO:0000176" id="r_0476" name="glutamine synthetase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YPR035W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0476"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/9611819"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0419" stoichiometry="1" constant="true"/> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_0991" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0394" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_0999" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0955"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0477" sboTerm="SBO:0000176" id="r_0477" name="glutamine-fructose-6-phosphate transaminase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YKL104C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0477"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00768"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/2656689"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0557" stoichiometry="1" constant="true"/> <speciesReference species="s_0999" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0412" stoichiometry="1" constant="true"/> <speciesReference species="s_0991" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0573"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0478" sboTerm="SBO:0000176" id="r_0478" name="glutaminyl-tRNA synthetase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YOR168W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0478"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03652"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/2991203"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_0999" stoichiometry="1" constant="true"/> <speciesReference species="s_1590" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0423" stoichiometry="1" constant="true"/> <speciesReference species="s_0633" stoichiometry="1" constant="true"/> <speciesReference species="s_0747" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0867"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0479" sboTerm="SBO:0000176" id="r_0479" name="glutamyl-tRNA synthetase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YGL245W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0479"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R05578"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_0991" stoichiometry="1" constant="true"/> <speciesReference species="s_1591" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0423" stoichiometry="1" constant="true"/> <speciesReference species="s_0633" stoichiometry="1" constant="true"/> <speciesReference species="s_0748" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0353"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0480" sboTerm="SBO:0000176" id="r_0480" name="glutamyl-tRNA synthetase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YOL033W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0480"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R05578"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/7607232"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0437" stoichiometry="1" constant="true"/> <speciesReference species="s_0993" stoichiometry="1" constant="true"/> <speciesReference species="s_1592" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0424" stoichiometry="1" constant="true"/> <speciesReference species="s_0636" stoichiometry="1" constant="true"/> <speciesReference species="s_0749" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0822"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0481" sboTerm="SBO:0000176" id="r_0481" name="glutathione oxidoreductase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:((YCL035C AND YPL091W) OR (YDR098C AND YPL091W) OR (YER174C AND YPL091W) OR (YDR513W AND YPL091W))</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0481"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00115"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0754" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1212" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0750" stoichiometry="2" constant="true"/> <speciesReference species="s_1207" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0242"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0104"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0181"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0304"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0915"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0482" sboTerm="SBO:0000176" id="r_0482" name="glutathione oxidoreductase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YPL059W AND YPL091W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0482"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00115"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/14672937"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0756" stoichiometry="1" constant="true"/> <speciesReference species="s_0799" stoichiometry="1" constant="true"/> <speciesReference species="s_1214" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0752" stoichiometry="2" constant="true"/> <speciesReference species="s_1210" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0910"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0916"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0483" sboTerm="SBO:0000176" id="r_0483" name="glutathione peridoxase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YIR037W OR YCL035C OR YBR244W OR YKL026C OR YDR513W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0483"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00274"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0750" stoichiometry="2" constant="true"/> <speciesReference species="s_0837" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0754" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="2" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0242"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0563"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0086"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0104"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0490"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0484" sboTerm="SBO:0000176" id="r_0484" name="glutathione peroxidase, mitochondria" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YPL059W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0484"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00274"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/12138088"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0752" stoichiometry="2" constant="true"/> <speciesReference species="s_0838" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0756" stoichiometry="1" constant="true"/> <speciesReference species="s_0807" stoichiometry="2" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0910"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0485" sboTerm="SBO:0000176" id="r_0485" name="glutathione synthetase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YOL049W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0485"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00497"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_0988" stoichiometry="1" constant="true"/> <speciesReference species="s_1003" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0394" stoichiometry="1" constant="true"/> <speciesReference species="s_0750" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0823"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0486" sboTerm="SBO:0000176" id="r_0486" name="glyceraldehyde-3-phosphate dehydrogenase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YJR009C OR YJL052W OR YGR192C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0486"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/3905788"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0764" stoichiometry="1" constant="true"/> <speciesReference species="s_1198" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0075" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1203" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0392"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0495"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0525"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0487" sboTerm="SBO:0000176" id="r_0487" name="glycerol dehydrogenase (NADP-dependent)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YOR120W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0487"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/11113971"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0765" stoichiometry="1" constant="true"/> <speciesReference species="s_1207" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0771" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1212" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1051"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0488" sboTerm="SBO:0000176" id="r_0488" name="glycerol kinase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YHL032C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0488"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00847"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_0765" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0394" stoichiometry="1" constant="true"/> <speciesReference species="s_0767" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0420"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0489" sboTerm="SBO:0000176" id="r_0489" name="glycerol-3-phosphatase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YER062C OR YIL053W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0489"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00841"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0767" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0765" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0466"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0288"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0490" sboTerm="SBO:0000176" id="r_0490" name="glycerol-3-phosphate dehydrogenase (fad)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YIL155C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0490"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00848"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0688" stoichiometry="1" constant="true"/> <speciesReference species="s_0770" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0632" stoichiometry="1" constant="true"/> <speciesReference species="s_0690" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0480"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0491" sboTerm="SBO:0000176" id="r_0491" name="glycerol-3-phosphate dehydrogenase (NAD)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YOL059W OR YDL022W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0491"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00842"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/8196651"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0629" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1203" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0767" stoichiometry="1" constant="true"/> <speciesReference species="s_1198" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0129"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0827"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0492" sboTerm="SBO:0000176" id="r_0492" name="glycerol-3-phosphate dehydrogenase (NAD)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YOL059W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0492"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00842"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0632" stoichiometry="1" constant="true"/> <speciesReference species="s_0799" stoichiometry="1" constant="true"/> <speciesReference species="s_1205" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0770" stoichiometry="1" constant="true"/> <speciesReference species="s_1200" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0828"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0497" sboTerm="SBO:0000176" id="r_0497" name="glycerophosphodiester phosphodiesterase (glycerophosphocholine)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YPL110C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0497"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01030"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/16141200"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> <speciesReference species="s_1433" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0512" stoichiometry="1" constant="true"/> <speciesReference species="s_0767" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0920"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0499" sboTerm="SBO:0000176" id="r_0499" name="glycinamide ribotide transformylase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDR408C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0499"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R04325"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0120" stoichiometry="1" constant="true"/> <speciesReference species="s_0325" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0301" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1487" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0231"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0500" sboTerm="SBO:0000176" id="r_0500" name="glycine C-acetyltransferase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0500"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00371"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/3086094"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0529" stoichiometry="1" constant="true"/> <speciesReference species="s_0952" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0373" stoichiometry="1" constant="true"/> <speciesReference species="s_1003" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction sboTerm="SBO:0000176" id="r_0501" name="glycine cleavage system" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YMR189W AND YFL018C AND YDR019C AND YAL044C)</p> </body> </notes> <listOfReactants> <speciesReference species="s_1005" stoichiometry="1" constant="true"/> <speciesReference species="s_1200" stoichiometry="1" constant="true"/> <speciesReference species="s_1488" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0307" stoichiometry="1" constant="true"/> <speciesReference species="s_0421" stoichiometry="1" constant="true"/> <speciesReference species="s_0460" stoichiometry="1" constant="true"/> <speciesReference species="s_1205" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0741"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0012"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0167"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0311"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0502" sboTerm="SBO:0000176" id="r_0502" name="glycine hydroxymethyltransferase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YLR058C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0502"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00945"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/8852837"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_1039" stoichiometry="1" constant="true"/> <speciesReference species="s_1487" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0306" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> <speciesReference species="s_1003" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0638"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0503" sboTerm="SBO:0000176" id="r_0503" name="glycine hydroxymethyltransferase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YBR263W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0503"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00945"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22672422"/> <rdf:li rdf:resource="http://identifiers.org/pubmed/8852837"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_1042" stoichiometry="1" constant="true"/> <speciesReference species="s_1488" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0307" stoichiometry="1" constant="true"/> <speciesReference species="s_0807" stoichiometry="1" constant="true"/> <speciesReference species="s_1005" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0091"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000176" id="r_0504" name="glycine-cleavage complex (lipoamide)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YMR189W AND YFL018C AND YDR019C AND YAL044C)</p> </body> </notes> <listOfReactants> <speciesReference species="s_0799" stoichiometry="1" constant="true"/> <speciesReference species="s_1005" stoichiometry="1" constant="true"/> <speciesReference species="s_1097" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0460" stoichiometry="1" constant="true"/> <speciesReference species="s_1409" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0741"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0012"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0167"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0311"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0505" sboTerm="SBO:0000176" id="r_0505" name="glycine-cleavage complex (lipoamide)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:((YDR019C AND YAL044C AND YMR189W AND YFL018C) OR (YIL125W AND YDR148C AND YFL018C))</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0505"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01698"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0627" stoichiometry="1" constant="true"/> <speciesReference species="s_1200" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0799" stoichiometry="1" constant="true"/> <speciesReference species="s_1097" stoichiometry="1" constant="true"/> <speciesReference species="s_1205" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0477"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0167"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0012"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0741"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0185"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0311"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0506" sboTerm="SBO:0000176" id="r_0506" name="glycine-cleavage complex (lipoylprotein)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YMR189W AND YFL018C AND YDR019C AND YAL044C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0506"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03425"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0799" stoichiometry="1" constant="true"/> <speciesReference species="s_1005" stoichiometry="1" constant="true"/> <speciesReference species="s_1098" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0460" stoichiometry="1" constant="true"/> <speciesReference species="s_1410" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0741"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0012"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0167"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0311"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000176" id="r_0507" name="glycine-cleavage complex (lipoylprotein)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YMR189W AND YFL018C AND YDR019C AND YAL044C)</p> </body> </notes> <listOfReactants> <speciesReference species="s_0799" stoichiometry="1" constant="true"/> <speciesReference species="s_1410" stoichiometry="1" constant="true"/> <speciesReference species="s_1488" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0307" stoichiometry="1" constant="true"/> <speciesReference species="s_0421" stoichiometry="1" constant="true"/> <speciesReference species="s_0628" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0741"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0012"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0167"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0311"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0508" sboTerm="SBO:0000176" id="r_0508" name="glycine-cleavage complex (lipoylprotein)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YMR189W AND YFL018C AND YDR019C AND YAL044C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0508"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03815"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0628" stoichiometry="1" constant="true"/> <speciesReference species="s_1200" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0799" stoichiometry="1" constant="true"/> <speciesReference species="s_1098" stoichiometry="1" constant="true"/> <speciesReference species="s_1205" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0741"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0012"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0167"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0311"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000176" id="r_0509" name="glycine-cleavage system (lipoamide)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YMR189W AND YFL018C AND YDR019C AND YAL044C)</p> </body> </notes> <listOfReactants> <speciesReference species="s_1409" stoichiometry="1" constant="true"/> <speciesReference species="s_1488" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0307" stoichiometry="1" constant="true"/> <speciesReference species="s_0421" stoichiometry="1" constant="true"/> <speciesReference species="s_0627" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0741"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0012"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0167"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0311"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0510" sboTerm="SBO:0000176" id="r_0510" name="glycogen (starch) synthase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:((YKR058W AND YFR015C) OR (YJL137C AND YFR015C) OR (YLR258W AND YKR058W) OR (YLR258W AND YJL137C))</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0510"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/8900126"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> <speciesReference species="s_1543" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0773" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1538" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0667"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0510"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0317"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0603"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000176" id="r_0511" name="glycogen phosphorylase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YPR160W</p> </body> </notes> <listOfReactants> <speciesReference species="s_0773" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0567" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0974"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0512" sboTerm="SBO:0000176" id="r_0512" name="glycyl-tRNA synthetase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YPR081C OR YBR121C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0512"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03654"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/10874035"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_1003" stoichiometry="1" constant="true"/> <speciesReference species="s_1593" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0423" stoichiometry="1" constant="true"/> <speciesReference species="s_0633" stoichiometry="1" constant="true"/> <speciesReference species="s_0757" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0064"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0963"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0514" sboTerm="SBO:0000176" id="r_0514" name="GMP synthase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YMR217W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0514"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01231"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> <speciesReference species="s_0999" stoichiometry="1" constant="true"/> <speciesReference species="s_1565" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0423" stoichiometry="1" constant="true"/> <speciesReference species="s_0633" stoichiometry="1" constant="true"/> <speciesReference species="s_0782" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="2" constant="true"/> <speciesReference species="s_0991" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0746"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0515" sboTerm="SBO:0000176" id="r_0515" name="gnnuc" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDR400W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0515"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01677"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0790" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0575" stoichiometry="1" constant="true"/> <speciesReference species="s_0787" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0227"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0518" sboTerm="SBO:0000176" id="r_0518" name="GPI-anchor assembly, step 2" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YMR281W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0518"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03482"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/10085243"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0331" stoichiometry="1" constant="true"/> <speciesReference species="s_0804" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0329" stoichiometry="1" constant="true"/> <speciesReference species="s_0363" stoichiometry="1" constant="true"/> <speciesReference species="s_0795" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0758"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0519" sboTerm="SBO:0000176" id="r_0519" name="GPI-anchor assembly, step 5" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YJR013W AND YCL052C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0519"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/11102867"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0330" stoichiometry="1" constant="true"/> <speciesReference species="s_0644" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0334" stoichiometry="1" constant="true"/> <speciesReference species="s_0646" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0527"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0108"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0520" sboTerm="SBO:0000176" id="r_0520" name="GPI-anchor assembly, step 6" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YKL165C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0520"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/11102867"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0334" stoichiometry="1" constant="true"/> <speciesReference species="s_1352" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0337" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0583"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0521" sboTerm="SBO:0000176" id="r_0521" name="GPI-anchor assembly, step 7" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YBR004C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0521"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/15623507"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0337" stoichiometry="1" constant="true"/> <speciesReference species="s_0644" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0339" stoichiometry="1" constant="true"/> <speciesReference species="s_0646" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0036"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0522" sboTerm="SBO:0000176" id="r_0522" name="GPI-anchor assembly, step 8" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YGL142C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0522"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/11102867"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0339" stoichiometry="1" constant="true"/> <speciesReference species="s_0644" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0338" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0341"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0523" sboTerm="SBO:0000176" id="r_0523" name="GPI-anchor assembly, step 9" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YDR302W OR YLL031C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0523"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/10793139"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0338" stoichiometry="1" constant="true"/> <speciesReference species="s_1352" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0332" stoichiometry="1" constant="true"/> <speciesReference species="s_0620" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0618"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0209"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0524" sboTerm="SBO:0000176" id="r_0524" name="GTP cyclohydrolase I" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YGR267C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0524"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00424"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0785" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0346" stoichiometry="1" constant="true"/> <speciesReference species="s_0722" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0410"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0525" sboTerm="SBO:0000176" id="r_0525" name="GTP cyclohydrolase II" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YBL033C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0525"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00425"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0785" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="3" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0141" stoichiometry="1" constant="true"/> <speciesReference species="s_0633" stoichiometry="1" constant="true"/> <speciesReference species="s_0722" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="2" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0025"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0526" sboTerm="SBO:0000176" id="r_0526" name="guanine deaminase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDL238C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0526"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/15565584"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0787" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0357" stoichiometry="1" constant="true"/> <speciesReference species="s_0419" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0161"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0527" sboTerm="SBO:0000176" id="r_0527" name="guanine phosphoribosyltransferase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDR399W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0527"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01229"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0787" stoichiometry="1" constant="true"/> <speciesReference species="s_1386" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0633" stoichiometry="1" constant="true"/> <speciesReference species="s_0782" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0226"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0528" sboTerm="SBO:0000176" id="r_0528" name="guanylate kinase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDR454C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0528"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00332"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_0782" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0394" stoichiometry="1" constant="true"/> <speciesReference species="s_0739" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0234"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000176" id="r_0529" name="guanylate kinase (GMP:dATP)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDR454C</p> </body> </notes> <listOfReactants> <speciesReference species="s_0586" stoichiometry="1" constant="true"/> <speciesReference species="s_0782" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0582" stoichiometry="1" constant="true"/> <speciesReference species="s_0739" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0234"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0530" sboTerm="SBO:0000176" id="r_0530" name="Heme O monooxygenase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YPL252C AND YDR376W AND YER141W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0530"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/11788607"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0812" stoichiometry="1" constant="true"/> <speciesReference species="s_1205" stoichiometry="1" constant="true"/> <speciesReference species="s_1278" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0807" stoichiometry="1" constant="true"/> <speciesReference species="s_0811" stoichiometry="1" constant="true"/> <speciesReference species="s_1200" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0938"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0222"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0301"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0531" sboTerm="SBO:0000176" id="r_0531" name="Heme O synthase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YPL172C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0531"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R07411"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/11788607"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0191" stoichiometry="1" constant="true"/> <speciesReference species="s_0712" stoichiometry="1" constant="true"/> <speciesReference species="s_0807" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0636" stoichiometry="1" constant="true"/> <speciesReference species="s_0812" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0927"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000176" id="r_0532" name="hexaprenyldihydroxybenzoate methyltransferase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YOR125C AND YOL096C AND YML110C AND YGL119W AND YGR255C AND YDR204W AND YLR201C)</p> </body> </notes> <listOfReactants> <speciesReference species="s_0154" stoichiometry="1" constant="true"/> <speciesReference species="s_0799" stoichiometry="1" constant="true"/> <speciesReference species="s_1419" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1415" stoichiometry="1" constant="true"/> <speciesReference species="s_1535" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0858"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0835"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0713"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0339"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0406"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0191"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0660"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0533" sboTerm="SBO:0000176" id="r_0533" name="hexokinase (D-fructose:ATP)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YGL253W OR YFR053C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0533"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00760"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_0553" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0394" stoichiometry="1" constant="true"/> <speciesReference species="s_0557" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0325"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0355"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0534" sboTerm="SBO:0000176" id="r_0534" name="hexokinase (D-glucose:ATP)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YGL253W OR YFR053C OR YCL040W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0534"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00299"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/6394965"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_0563" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0394" stoichiometry="1" constant="true"/> <speciesReference species="s_0568" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0106"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0325"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0355"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0535" sboTerm="SBO:0000176" id="r_0535" name="hexokinase (D-mannose:ATP)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YGL253W OR YFR053C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0535"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01326"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_0571" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0394" stoichiometry="1" constant="true"/> <speciesReference species="s_0574" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0325"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0355"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0536" sboTerm="SBO:0000176" id="r_0536" name="histidinol dehydrogenase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YCL030C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0536"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01158"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> <speciesReference species="s_1010" stoichiometry="1" constant="true"/> <speciesReference species="s_1198" stoichiometry="2" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0794" stoichiometry="3" constant="true"/> <speciesReference species="s_1006" stoichiometry="1" constant="true"/> <speciesReference species="s_1203" stoichiometry="2" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0103"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0537" sboTerm="SBO:0000176" id="r_0537" name="histidinol-phosphatase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YFR025C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0537"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03013"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> <speciesReference species="s_1011" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1010" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0320"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0538" sboTerm="SBO:0000176" id="r_0538" name="histidinol-phosphate transaminase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YIL116W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0538"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03243"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0207" stoichiometry="1" constant="true"/> <speciesReference species="s_0991" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0180" stoichiometry="1" constant="true"/> <speciesReference species="s_1011" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0476"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0539" sboTerm="SBO:0000176" id="r_0539" name="histidyl-tRNA synthetase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YPR033C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0539"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03655"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/1459448"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_1006" stoichiometry="1" constant="true"/> <speciesReference species="s_1594" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0423" stoichiometry="1" constant="true"/> <speciesReference species="s_0633" stoichiometry="1" constant="true"/> <speciesReference species="s_0832" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0953"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0540" sboTerm="SBO:0000176" id="r_0540" name="histidyl-tRNA synthetase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YPR033C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0540"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03655"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/1459448"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0437" stoichiometry="1" constant="true"/> <speciesReference species="s_1008" stoichiometry="1" constant="true"/> <speciesReference species="s_1595" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0424" stoichiometry="1" constant="true"/> <speciesReference species="s_0636" stoichiometry="1" constant="true"/> <speciesReference species="s_0833" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0954"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0541" sboTerm="SBO:0000176" id="r_0541" name="hnRNP arginine N-methyltransferase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YBR034C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0541"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01159"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/8647869"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_1006" stoichiometry="1" constant="true"/> <speciesReference species="s_1416" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1183" stoichiometry="1" constant="true"/> <speciesReference species="s_1413" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0047"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0542" sboTerm="SBO:0000176" id="r_0542" name="homoacontinate hydratase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDR234W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0542"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R04371"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/2507177"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0454" stoichiometry="1" constant="true"/> <speciesReference species="s_0807" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0836" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0196"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0543" sboTerm="SBO:0000176" id="r_0543" name="homocitrate synthase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YDL131W OR YDL182W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0543"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00271"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0183" stoichiometry="1" constant="true"/> <speciesReference species="s_0377" stoichiometry="1" constant="true"/> <speciesReference species="s_0808" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0533" stoichiometry="1" constant="true"/> <speciesReference species="s_0800" stoichiometry="1" constant="true"/> <speciesReference species="s_0835" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0154"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0146"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0544" sboTerm="SBO:0000176" id="r_0544" name="homocysteine S-methyltransferase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YPL273W OR YLL062C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0544"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00650"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/11013242"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_1012" stoichiometry="1" constant="true"/> <speciesReference species="s_1416" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1029" stoichiometry="1" constant="true"/> <speciesReference species="s_1413" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0945"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0625"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0545" sboTerm="SBO:0000176" id="r_0545" name="homoisocitrate dehydrogenase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YIL094C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0545"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/10714900"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0836" stoichiometry="1" constant="true"/> <speciesReference species="s_1200" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0177" stoichiometry="1" constant="true"/> <speciesReference species="s_0799" stoichiometry="1" constant="true"/> <speciesReference species="s_1205" stoichiometry="1" constant="true"/> <speciesReference species="s_0460" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0472"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0547" sboTerm="SBO:0000176" id="r_0547" name="homoserine dehydrogenase (NADP)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YJR139C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0547"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01775"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/8500624"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_0978" stoichiometry="1" constant="true"/> <speciesReference species="s_1212" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1014" stoichiometry="1" constant="true"/> <speciesReference species="s_1207" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0548"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0548" sboTerm="SBO:0000176" id="r_0548" name="homoserine kinase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YHR025W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0548"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01771"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/8973190"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_1014" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0394" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1238" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0428"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0549" sboTerm="SBO:0000176" id="r_0549" name="homoserine O-trans-acetylase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YNL277W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0549"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01776"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/16232856"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0373" stoichiometry="1" constant="true"/> <speciesReference species="s_1014" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0529" stoichiometry="1" constant="true"/> <speciesReference species="s_1233" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0799"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0550" sboTerm="SBO:0000176" id="r_0550" name="hydrogen peroxide reductase (thioredoxin)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:((YDR453C AND YGR209C) OR (YLR043C AND YDR453C))</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0550"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/15210711"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0837" stoichiometry="1" constant="true"/> <speciesReference species="s_1616" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0803" stoichiometry="2" constant="true"/> <speciesReference species="s_1620" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="s_1616"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0398"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0233"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0551" sboTerm="SBO:0000176" id="r_0551" name="hydrogen peroxide reductase (thioredoxin)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YBL064C AND YCR083W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0551"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/10821871"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0838" stoichiometry="1" constant="true"/> <speciesReference species="s_1617" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0807" stoichiometry="2" constant="true"/> <speciesReference species="s_1621" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0029"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0124"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0552" sboTerm="SBO:0000176" id="r_0552" name="hydrogen peroxide reductase (thioredoxin)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:((YGR209C AND YLR109W) OR (YLR043C AND YLR109W))</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0552"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/14640681"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0840" stoichiometry="1" constant="true"/> <speciesReference species="s_1619" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0809" stoichiometry="2" constant="true"/> <speciesReference species="s_1623" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="s_1619"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0400"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0645"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0553" sboTerm="SBO:0000176" id="r_0553" name="hydroxyacylglutathione hydrolase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDR272W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0553"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01736"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0033" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0025" stoichiometry="1" constant="true"/> <speciesReference species="s_0750" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0202"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0554" sboTerm="SBO:0000176" id="r_0554" name="hydroxyacylglutathione hydrolase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YOR040W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0554"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01736"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0034" stoichiometry="1" constant="true"/> <speciesReference species="s_0807" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0027" stoichiometry="1" constant="true"/> <speciesReference species="s_0752" stoichiometry="1" constant="true"/> <speciesReference species="s_0799" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0846"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0555" sboTerm="SBO:0000176" id="r_0555" name="hydroxybenzoate octaprenyltransferase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YNR041C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0555"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R05616"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0287" stoichiometry="1" constant="true"/> <speciesReference species="s_0831" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0216" stoichiometry="1" constant="true"/> <speciesReference species="s_0636" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0811"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0556" sboTerm="SBO:0000176" id="r_0556" name="hydroxyethylthiazole kinase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YPL214C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0556"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R04448"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0310" stoichiometry="1" constant="true"/> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0293" stoichiometry="1" constant="true"/> <speciesReference species="s_0394" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0933"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000176" id="r_0557" name="hydroxymethylbilane synthase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDL205C</p> </body> </notes> <listOfReactants> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> <speciesReference species="s_1372" stoichiometry="4" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0419" stoichiometry="4" constant="true"/> <speciesReference species="s_1378" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0158"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0558" sboTerm="SBO:0000176" id="r_0558" name="hydroxymethylglutaryl CoA reductase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YLR450W OR YML075C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0558"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02082"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0218" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="2" constant="true"/> <speciesReference species="s_1212" stoichiometry="2" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0028" stoichiometry="1" constant="true"/> <speciesReference species="s_0529" stoichiometry="1" constant="true"/> <speciesReference species="s_1207" stoichiometry="2" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0697"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0708"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0559" sboTerm="SBO:0000176" id="r_0559" name="hydroxymethylglutaryl CoA synthase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YML126C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0559"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01978"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0367" stoichiometry="1" constant="true"/> <speciesReference species="s_0373" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0218" stoichiometry="1" constant="true"/> <speciesReference species="s_0529" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0716"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0560" sboTerm="SBO:0000176" id="r_0560" name="hydroxymethylglutaryl CoA synthase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YML126C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0560"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01978"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0370" stoichiometry="1" constant="true"/> <speciesReference species="s_0376" stoichiometry="1" constant="true"/> <speciesReference species="s_0807" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0221" stoichiometry="1" constant="true"/> <speciesReference species="s_0532" stoichiometry="1" constant="true"/> <speciesReference species="s_0799" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0717"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0561" sboTerm="SBO:0000176" id="r_0561" name="hydroxymethylpyrimidine kinase (ATP)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YPL258C OR YPR121W OR YOL055C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0561"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03471"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0270" stoichiometry="1" constant="true"/> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0268" stoichiometry="1" constant="true"/> <speciesReference species="s_0394" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0825"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0966"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0939"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0562" sboTerm="SBO:0000176" id="r_0562" name="hypoxanthine phosphoribosyltransferase (Hypoxanthine)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDR399W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0562"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01132"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0843" stoichiometry="1" constant="true"/> <speciesReference species="s_1386" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0633" stoichiometry="1" constant="true"/> <speciesReference species="s_0849" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0226"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0563" sboTerm="SBO:0000176" id="r_0563" name="Imidazole-glycerol-3-phosphate synthase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YBR248C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0563"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R04558"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0312" stoichiometry="1" constant="true"/> <speciesReference species="s_0999" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0403" stoichiometry="1" constant="true"/> <speciesReference species="s_0550" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_0991" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0087"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0564" sboTerm="SBO:0000176" id="r_0564" name="imidazoleglycerol-phosphate dehydratase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YOR202W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0564"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03457"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0550" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0207" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0875"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0565" sboTerm="SBO:0000176" id="r_0565" name="IMP dehydrogenase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YLR432W OR YHR216W OR YML056C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0565"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01130"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/11003640"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> <speciesReference species="s_0849" stoichiometry="1" constant="true"/> <speciesReference species="s_1198" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1203" stoichiometry="1" constant="true"/> <speciesReference species="s_1565" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0705"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0458"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0693"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0566" sboTerm="SBO:0000176" id="r_0566" name="indole-3-glycerol-phosphate synthase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YKL211C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0566"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03508"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/6323449"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0076" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0086" stoichiometry="1" constant="true"/> <speciesReference species="s_0456" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0591"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0567" sboTerm="SBO:0000176" id="r_0567" name="indole-3-pyruvate decarboxylase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YLR134W OR YGR087C OR YLR044C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0567"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01974"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/12902239"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_0855" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0456" stoichiometry="1" constant="true"/> <speciesReference species="s_0850" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0370"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0636"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0647"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0568" sboTerm="SBO:0000176" id="r_0568" name="inorganic diphosphatase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YBR011C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0568"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/8224193"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0633" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="2" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0038"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0569" sboTerm="SBO:0000176" id="r_0569" name="inorganic diphosphatase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YMR267W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0569"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/1648084"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0636" stoichiometry="1" constant="true"/> <speciesReference species="s_0807" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0799" stoichiometry="1" constant="true"/> <speciesReference species="s_1326" stoichiometry="2" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0754"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0570" sboTerm="SBO:0000176" id="r_0570" name="inosine monophosphate cyclohydrolase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YMR120C OR YLR028C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0570"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01127"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_1365" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> <speciesReference species="s_0849" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0631"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0736"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0571" sboTerm="SBO:0000176" id="r_0571" name="inositol-1,3,4,5,6-pentakisphosphate 2-kinase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDR315C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0571"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R05202"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/10960485"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0438" stoichiometry="1" constant="true"/> <speciesReference species="s_0800" stoichiometry="1" constant="true"/> <speciesReference species="s_1157" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0398" stoichiometry="1" constant="true"/> <speciesReference species="s_1159" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0211"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0572" sboTerm="SBO:0000176" id="r_0572" name="inositol-1,3,4,5-triphosphate 6-kinase, nucleus" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDR173C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0572"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/11956213"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0123" stoichiometry="1" constant="true"/> <speciesReference species="s_0438" stoichiometry="1" constant="true"/> <speciesReference species="s_0800" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0398" stoichiometry="1" constant="true"/> <speciesReference species="s_1157" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0187"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0573" sboTerm="SBO:0000176" id="r_0573" name="inositol-1,4,5,6- tetrakisphosphate 3-kinase, nucleus" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDR173C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0573"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R05801"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/11956213"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0124" stoichiometry="1" constant="true"/> <speciesReference species="s_0438" stoichiometry="1" constant="true"/> <speciesReference species="s_0800" stoichiometry="1" constant="true"/> 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</notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0656"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/10855721"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> <speciesReference species="s_0927" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0362" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_0929" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0859"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0657" sboTerm="SBO:0000176" id="r_0657" name="isobutyl acetate-hydrolyzing esterase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YOR126C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0657"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/10855721"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> <speciesReference species="s_0935" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0362" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_0932" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0859"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0658" sboTerm="SBO:0000176" id="r_0658" name="isocitrate dehydrogenase (NAD+)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YOR136W AND YNL037C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0658"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00709"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/1644826"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0941" stoichiometry="1" constant="true"/> <speciesReference species="s_1200" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0182" stoichiometry="1" constant="true"/> <speciesReference species="s_0460" stoichiometry="1" constant="true"/> <speciesReference species="s_1205" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0862"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0771"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0659" sboTerm="SBO:0000176" id="r_0659" name="isocitrate dehydrogenase (NADP)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YLR174W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0659"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/9175438"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0940" stoichiometry="1" constant="true"/> <speciesReference species="s_1207" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0180" stoichiometry="1" constant="true"/> <speciesReference species="s_0456" stoichiometry="1" constant="true"/> <speciesReference species="s_1212" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0984"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0661" sboTerm="SBO:0000176" id="r_0661" name="isocitrate dehydrogenase (NADP+), peroxisomal" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YNL009W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0661"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00267"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/9175438"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0942" stoichiometry="1" constant="true"/> <speciesReference species="s_1211" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0184" stoichiometry="1" constant="true"/> <speciesReference species="s_0462" stoichiometry="1" constant="true"/> <speciesReference species="s_1215" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0769"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0662" sboTerm="SBO:0000176" id="r_0662" name="isocitrate lyase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YER065C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0662"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00479"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0940" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0779" stoichiometry="1" constant="true"/> <speciesReference species="s_1458" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0289"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0663" sboTerm="SBO:0000176" id="r_0663" name="isoleucine transaminase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YJR148W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0663"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02199"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/8798704"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0180" stoichiometry="1" constant="true"/> <speciesReference species="s_1016" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0056" stoichiometry="1" constant="true"/> <speciesReference species="s_0991" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0550"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0664" sboTerm="SBO:0000176" id="r_0664" name="isoleucine transaminase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YHR208W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0664"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02199"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/8798704"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0182" stoichiometry="1" constant="true"/> <speciesReference species="s_1018" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0060" stoichiometry="1" constant="true"/> <speciesReference species="s_0993" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0457"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0665" sboTerm="SBO:0000176" id="r_0665" name="isoleucyl-tRNA synthetase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YBL076C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0665"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03656"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/7619074"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_1016" stoichiometry="1" constant="true"/> <speciesReference species="s_1596" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0423" stoichiometry="1" constant="true"/> <speciesReference species="s_0633" stoichiometry="1" constant="true"/> <speciesReference species="s_0847" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0031"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0666" sboTerm="SBO:0000176" id="r_0666" name="isoleucyl-tRNA synthetase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YPL040C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0666"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03656"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/7607232"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0437" stoichiometry="1" constant="true"/> <speciesReference species="s_1018" stoichiometry="1" constant="true"/> <speciesReference species="s_1597" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0424" stoichiometry="1" constant="true"/> <speciesReference species="s_0636" stoichiometry="1" constant="true"/> <speciesReference species="s_0848" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0907"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0667" sboTerm="SBO:0000176" id="r_0667" name="isopentenyl-diphosphate D-isomerase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YPL117C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0667"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01123"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0943" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1376" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0922"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0668" sboTerm="SBO:0000176" id="r_0668" name="itaconate-CoA ligase (ADP-forming)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YGR244C AND YOR142W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0668"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02404"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/9874242"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0437" stoichiometry="1" constant="true"/> <speciesReference species="s_0532" stoichiometry="1" constant="true"/> <speciesReference species="s_0946" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0397" stoichiometry="1" constant="true"/> <speciesReference species="s_0949" stoichiometry="1" constant="true"/> <speciesReference species="s_1326" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0402"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0863"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0669" sboTerm="SBO:0000176" id="r_0669" name="ketol-acid reductoisomerase (2-aceto-2-hydroxybutanoate)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YLR355C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0669"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/3027658"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0039" stoichiometry="1" constant="true"/> <speciesReference species="s_0799" stoichiometry="1" constant="true"/> <speciesReference species="s_1214" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0008" stoichiometry="1" constant="true"/> <speciesReference species="s_1210" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0685"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0670" sboTerm="SBO:0000176" id="r_0670" name="kynureninase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YLR231C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0670"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00987"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/12062417"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> <speciesReference species="s_1020" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0427" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_0955" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0663"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0671" sboTerm="SBO:0000176" id="r_0671" name="kynurenine 3-monooxygenase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YBL098W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0671"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01960"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/12062417"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1020" stoichiometry="1" constant="true"/> <speciesReference species="s_1212" stoichiometry="1" constant="true"/> <speciesReference species="s_1275" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0222" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> <speciesReference species="s_1207" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0032"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0672" sboTerm="SBO:0000176" id="r_0672" name="L-1-pyrroline-3-hydroxy-5-carboxylate dehydrogenase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YHR037W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0672"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R04444"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0117" stoichiometry="1" constant="true"/> <speciesReference species="s_0807" stoichiometry="2" constant="true"/> <speciesReference species="s_1200" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0678" stoichiometry="1" constant="true"/> <speciesReference species="s_0799" stoichiometry="1" constant="true"/> <speciesReference species="s_1205" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0431"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0673" sboTerm="SBO:0000176" id="r_0673" name="L-4-hydroxyglutamate semialdehyde dehydrogenase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YHR037W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0673"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R05051"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0807" stoichiometry="1" constant="true"/> <speciesReference species="s_0954" stoichiometry="1" constant="true"/> <speciesReference species="s_1200" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0678" stoichiometry="1" constant="true"/> <speciesReference species="s_0799" stoichiometry="2" constant="true"/> <speciesReference species="s_1205" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0431"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0674" sboTerm="SBO:0000176" id="r_0674" name="L-alanine transaminase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YLR089C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0674"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00258"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0182" stoichiometry="1" constant="true"/> <speciesReference species="s_0957" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0993" stoichiometry="1" constant="true"/> <speciesReference species="s_1401" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0642"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0675" sboTerm="SBO:0000176" id="r_0675" name="L-allo-threonine aldolase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YEL046C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0675"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R06171"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/9151955"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0958" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0359" stoichiometry="1" constant="true"/> <speciesReference species="s_1003" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0260"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0676" sboTerm="SBO:0000176" id="r_0676" name="L-allo-threonine dehydrogenase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YMR226C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0676"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/12535615"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0958" stoichiometry="1" constant="true"/> <speciesReference species="s_1207" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_0952" stoichiometry="1" constant="true"/> <speciesReference species="s_1212" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0748"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0678" sboTerm="SBO:0000176" id="r_0678" name="L-aminoadipate-semialdehyde dehydrogenase (NADPH)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YBR115C AND YGL154C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0678"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/3928261"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_0953" stoichiometry="1" constant="true"/> <speciesReference species="s_1212" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> <speciesReference species="s_0959" stoichiometry="1" constant="true"/> <speciesReference species="s_1207" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0062"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0343"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0679" sboTerm="SBO:0000176" id="r_0679" name="L-asparaginase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDR321W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0679"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/8026756"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> <speciesReference species="s_0969" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0419" stoichiometry="1" constant="true"/> <speciesReference species="s_0973" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0212"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0680" sboTerm="SBO:0000176" id="r_0680" name="L-asparaginase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YLR160C OR YLR155C OR YLR158C OR YLR157C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0680"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/3042786"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0805" stoichiometry="1" constant="true"/> <speciesReference species="s_0970" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0420" stoichiometry="1" constant="true"/> <speciesReference species="s_0974" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0654"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0655"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0653"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0656"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000176" id="r_0681" name="L-erythro-4-hydroxyglutamate:2-oxoglutarate aminotransferase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YLR027C</p> </body> </notes> <listOfReactants> <speciesReference species="s_0180" stoichiometry="1" constant="true"/> <speciesReference species="s_0677" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0282" stoichiometry="1" constant="true"/> <speciesReference species="s_0991" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0629"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000176" id="r_0682" name="L-erythro-4-hydroxyglutamate:2-oxoglutarate aminotransferase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YKL106W</p> </body> </notes> <listOfReactants> <speciesReference species="s_0182" stoichiometry="1" constant="true"/> <speciesReference species="s_0678" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0283" stoichiometry="1" constant="true"/> <speciesReference species="s_0993" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0574"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000176" id="r_0683" name="L-erythro-4-hydroxyglutamate:2-oxoglutarate aminotransferase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YLR027C</p> </body> </notes> <listOfReactants> <speciesReference species="s_0184" stoichiometry="1" constant="true"/> <speciesReference species="s_0679" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0284" stoichiometry="1" constant="true"/> <speciesReference species="s_0995" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0630"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0687" sboTerm="SBO:0000176" id="r_0687" name="L-hydroxyproline reductase (NADP)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YER023W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0687"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03293"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0116" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="2" constant="true"/> <speciesReference species="s_1212" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1207" stoichiometry="1" constant="true"/> <speciesReference species="s_1035" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0276"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0688" sboTerm="SBO:0000176" id="r_0688" name="L-lactaldehyde:NADP+ 1-oxidoreductase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YHR104W OR YOL151W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0688"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02260"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/12722185"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1151" stoichiometry="1" constant="true"/> <speciesReference species="s_1212" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0062" stoichiometry="1" constant="true"/> <speciesReference species="s_1207" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0842"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0447"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0689" sboTerm="SBO:0000176" id="r_0689" name="L-serine deaminase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YCL064C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0689"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/2194168"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_1039" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0419" stoichiometry="1" constant="true"/> <speciesReference species="s_1399" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0109"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0690" sboTerm="SBO:0000176" id="r_0690" name="L-serine dehydrogenase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YMR226C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0690"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R06126"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/12535615"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_1039" stoichiometry="1" constant="true"/> <speciesReference species="s_1207" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_0960" stoichiometry="1" constant="true"/> <speciesReference species="s_1212" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0748"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000176" id="r_0691" name="L-sorbitol dehydrogenase (L-sorbose-producing)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YJR159W</p> </body> </notes> <listOfReactants> <speciesReference species="s_0989" stoichiometry="1" constant="true"/> <speciesReference species="s_1198" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1043" stoichiometry="1" constant="true"/> <speciesReference species="s_1203" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0554"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0692" sboTerm="SBO:0000176" id="r_0692" name="L-threonine deaminase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YCL064C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0692"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/1628804"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_1045" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0178" stoichiometry="1" constant="true"/> <speciesReference species="s_0419" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0109"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0693" sboTerm="SBO:0000176" id="r_0693" name="L-threonine deaminase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YER086W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0693"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/3289762"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_1047" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0179" stoichiometry="1" constant="true"/> <speciesReference species="s_0421" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0295"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0694" sboTerm="SBO:0000176" id="r_0694" name="L-tryptophan:oxygen 2,3-oxidoreductase (decyclizing)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YJR078W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0694"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00678"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/12062417"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_1048" stoichiometry="1" constant="true"/> <speciesReference species="s_1275" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1195" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0538"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0695" sboTerm="SBO:0000176" id="r_0695" name="L-tyrosine N-formyltransferase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDR403W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0695"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/8706696"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0120" stoichiometry="1" constant="true"/> <speciesReference species="s_1051" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1196" stoichiometry="1" constant="true"/> <speciesReference species="s_1487" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0230"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0696" sboTerm="SBO:0000176" id="r_0696" name="lactaldehyde dehydrogenase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0696"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01446"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/3908097"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0062" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> <speciesReference species="s_1198" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0063" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="2" constant="true"/> <speciesReference species="s_1203" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="meta_r_0697" sboTerm="SBO:0000176" id="r_0697" name="lactoylglutathione lyase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YML004C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0697"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02530"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0750" stoichiometry="1" constant="true"/> <speciesReference species="s_1151" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0033" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0698"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0698" sboTerm="SBO:0000176" id="r_0698" name="lanosterol synthase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YHR072W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0698"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03199"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0037" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1059" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0440"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0699" sboTerm="SBO:0000176" id="r_0699" name="leucine transaminase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YJR148W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0699"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01090"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/9748245"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0180" stoichiometry="1" constant="true"/> <speciesReference species="s_1021" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0291" stoichiometry="1" constant="true"/> <speciesReference species="s_0991" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0550"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0700" sboTerm="SBO:0000176" id="r_0700" name="leucine transaminase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YHR208W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0700"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01090"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/8798704"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0182" stoichiometry="1" constant="true"/> <speciesReference species="s_1023" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0292" stoichiometry="1" constant="true"/> <speciesReference species="s_0993" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0457"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0701" sboTerm="SBO:0000176" id="r_0701" name="leucyl-tRNA synthetase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YPL160W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0701"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03657"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/9742237"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_1021" stoichiometry="1" constant="true"/> <speciesReference species="s_1598" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0423" stoichiometry="1" constant="true"/> <speciesReference species="s_0633" stoichiometry="1" constant="true"/> <speciesReference species="s_1077" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0926"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0702" sboTerm="SBO:0000176" id="r_0702" name="leucyl-tRNA synthetase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YLR382C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0702"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03657"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/1990003"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0437" stoichiometry="1" constant="true"/> <speciesReference species="s_1023" stoichiometry="1" constant="true"/> <speciesReference species="s_1599" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0424" stoichiometry="1" constant="true"/> <speciesReference species="s_0636" stoichiometry="1" constant="true"/> <speciesReference species="s_1078" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0689"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0703" sboTerm="SBO:0000176" id="r_0703" name="leukotriene A4 hydrolase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YNL045W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0703"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/11601994"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> <speciesReference species="s_1079" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0013" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0772"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0704" sboTerm="SBO:0000176" id="r_0704" name="leukotriene A4 hydrolase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YNL045W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0704"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/11601994"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0808" stoichiometry="1" constant="true"/> <speciesReference species="s_1080" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0014" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0773"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0705" sboTerm="SBO:0000176" id="r_0705" name="leukotriene A4 hydrolase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YNL045W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0705"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/11601994"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> <speciesReference species="s_1079" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0608" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0772"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0706" sboTerm="SBO:0000176" id="r_0706" name="leukotriene A4 hydrolase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YNL045W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0706"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/11601994"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0808" stoichiometry="1" constant="true"/> <speciesReference species="s_1080" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0609" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0773"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0707" sboTerm="SBO:0000176" id="r_0707" name="leukotriene A4 hydrolase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YNL045W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0707"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03057"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/11601994"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> <speciesReference species="s_1079" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1081" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0772"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0708" sboTerm="SBO:0000176" id="r_0708" name="leukotriene A4 hydrolase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YNL045W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0708"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03057"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/11601994"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0808" stoichiometry="1" constant="true"/> <speciesReference species="s_1080" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1082" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0773"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0711" sboTerm="SBO:0000176" id="r_0711" name="lysyl-tRNA synthetase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDR037W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0711"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03658"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/2903861"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_1025" stoichiometry="1" constant="true"/> <speciesReference species="s_1600" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0423" stoichiometry="1" constant="true"/> <speciesReference species="s_0633" stoichiometry="1" constant="true"/> <speciesReference species="s_1099" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0171"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0712" sboTerm="SBO:0000176" id="r_0712" name="lysyl-tRNA synthetase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YNL073W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0712"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03658"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/2016746"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0437" stoichiometry="1" constant="true"/> <speciesReference species="s_1027" stoichiometry="1" constant="true"/> <speciesReference species="s_1601" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0424" stoichiometry="1" constant="true"/> <speciesReference species="s_0636" stoichiometry="1" constant="true"/> <speciesReference species="s_1100" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0776"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0713" sboTerm="SBO:0000176" id="r_0713" name="malate dehydrogenase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YKL085W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0713"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00342"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/9175438"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0068" stoichiometry="1" constant="true"/> <speciesReference species="s_1200" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0799" stoichiometry="1" constant="true"/> <speciesReference species="s_1205" stoichiometry="1" constant="true"/> <speciesReference species="s_1273" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0571"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0714" sboTerm="SBO:0000176" id="r_0714" name="malate dehydrogenase, cytoplasmic" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YOL126C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0714"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00342"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/11914276"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0066" stoichiometry="1" constant="true"/> <speciesReference species="s_1198" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1203" stoichiometry="1" constant="true"/> <speciesReference species="s_1271" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0838"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0715" sboTerm="SBO:0000176" id="r_0715" name="malate dehydrogenase, peroxisomal" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDL078C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0715"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00342"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/9175438"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0069" stoichiometry="1" constant="true"/> <speciesReference species="s_1202" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0801" stoichiometry="1" constant="true"/> <speciesReference species="s_1206" stoichiometry="1" constant="true"/> <speciesReference species="s_1274" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0137"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0716" sboTerm="SBO:0000176" id="r_0716" name="malate synthase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YNL117W OR YIR031C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0716"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00472"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0373" stoichiometry="1" constant="true"/> <speciesReference species="s_0779" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0066" stoichiometry="1" constant="true"/> <speciesReference species="s_0529" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0487"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0782"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0717" sboTerm="SBO:0000176" id="r_0717" name="malate synthase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YNL117W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0717"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00472"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/11846793"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0378" stoichiometry="1" constant="true"/> <speciesReference species="s_0781" stoichiometry="1" constant="true"/> <speciesReference species="s_0809" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0069" stoichiometry="1" constant="true"/> <speciesReference species="s_0534" stoichiometry="1" constant="true"/> <speciesReference species="s_0801" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0783"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0718" sboTerm="SBO:0000176" id="r_0718" name="malic enzyme (NAD)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YKL029C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0718"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00214"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0068" stoichiometry="1" constant="true"/> <speciesReference species="s_1200" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0460" stoichiometry="1" constant="true"/> <speciesReference species="s_1205" stoichiometry="1" constant="true"/> <speciesReference species="s_1401" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0564"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0721" sboTerm="SBO:0000176" id="r_0721" name="malonyl-CoA-ACP transacylase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YOR221C AND YKL192C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0721"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01626"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/15387819"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_1104" stoichiometry="1" constant="true"/> <speciesReference species="s_1845" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0465" stoichiometry="1" constant="true"/> <speciesReference species="s_0532" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0878"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="s_1845"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0722" sboTerm="SBO:0000176" id="r_0722" name="mannose-1-phosphate guanylyltransferase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDL055C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0722"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00885"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0573" stoichiometry="1" constant="true"/> <speciesReference species="s_0785" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0633" stoichiometry="1" constant="true"/> <speciesReference species="s_0743" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0134"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0723" sboTerm="SBO:0000176" id="r_0723" name="mannose-6-phosphate isomerase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YER003C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0723"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00772"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0574" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0557" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0269"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0724" sboTerm="SBO:0000176" id="r_0724" name="methenyltetrahydrifikate cyclohydrolase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YBR084W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0724"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01655"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0305" stoichiometry="1" constant="true"/> <speciesReference species="s_0807" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0121" stoichiometry="1" constant="true"/> <speciesReference species="s_0799" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0057"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0725" sboTerm="SBO:0000176" id="r_0725" name="methenyltetrahydrofolate cyclohydrolase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YGR204W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0725"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01655"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0304" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0120" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0396"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0726" sboTerm="SBO:0000176" id="r_0726" name="methionine adenosyltransferase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YLR180W OR YDR502C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0726"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00177"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/194884"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> <speciesReference species="s_1029" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0633" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> <speciesReference species="s_1416" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0239"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0658"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0727" sboTerm="SBO:0000176" id="r_0727" name="methionine synthase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YER091C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0727"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00946"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/16083849"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0322" stoichiometry="1" constant="true"/> <speciesReference species="s_1012" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1029" stoichiometry="1" constant="true"/> <speciesReference species="s_1487" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0298"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0728" sboTerm="SBO:0000176" id="r_0728" name="methionyl-tRNA formyltransferase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YBL013W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0728"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03940"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0121" stoichiometry="1" constant="true"/> <speciesReference species="s_1149" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0713" stoichiometry="1" constant="true"/> <speciesReference species="s_0799" stoichiometry="1" constant="true"/> <speciesReference species="s_1488" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0021"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0729" sboTerm="SBO:0000176" id="r_0729" name="methionyl-tRNA synthetase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YGR264C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0729"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03659"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/6304034"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_1029" stoichiometry="1" constant="true"/> <speciesReference species="s_1602" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0423" stoichiometry="1" constant="true"/> <speciesReference species="s_0633" stoichiometry="1" constant="true"/> <speciesReference species="s_1148" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0409"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0730" sboTerm="SBO:0000176" id="r_0730" name="methionyl-tRNA synthetase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YGR171C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0730"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03659"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/2645139"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0437" stoichiometry="1" constant="true"/> <speciesReference species="s_1031" stoichiometry="1" constant="true"/> <speciesReference species="s_1603" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0424" stoichiometry="1" constant="true"/> <speciesReference species="s_0636" stoichiometry="1" constant="true"/> <speciesReference species="s_1149" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0384"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0731" sboTerm="SBO:0000176" id="r_0731" name="methylenetetrahydrofolate dehydrogenase (NAD)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YKR080W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0731"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01218"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0306" stoichiometry="1" constant="true"/> <speciesReference species="s_1198" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0304" stoichiometry="1" constant="true"/> <speciesReference species="s_1203" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0610"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0732" sboTerm="SBO:0000176" id="r_0732" name="methylenetetrahydrofolate dehydrogenase (NADP)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YGR204W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0732"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01220"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0306" stoichiometry="1" constant="true"/> <speciesReference species="s_1207" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0304" stoichiometry="1" constant="true"/> <speciesReference species="s_1212" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0396"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0733" sboTerm="SBO:0000176" id="r_0733" name="methylenetetrahydrofolate dehydrogenase (NADP)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YBR084W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0733"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01220"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/10871621"/> <rdf:li rdf:resource="http://identifiers.org/pubmed/1916088"/> <rdf:li rdf:resource="http://identifiers.org/pubmed/8852837"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0307" stoichiometry="1" constant="true"/> <speciesReference species="s_1210" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0305" stoichiometry="1" constant="true"/> <speciesReference species="s_1214" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0057"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0734" sboTerm="SBO:0000176" id="r_0734" name="methylisocitrate lyase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YPR006C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0734"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00409"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/16332871"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0012" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1401" stoichiometry="1" constant="true"/> <speciesReference species="s_1460" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0949"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0735" sboTerm="SBO:0000176" id="r_0735" name="mevalonate kinase (atp)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YMR208W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0735"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02245"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0028" stoichiometry="1" constant="true"/> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0019" stoichiometry="1" constant="true"/> <speciesReference species="s_0394" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0745"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000176" id="r_0736" name="mevalonate kinase (ctp)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YMR208W</p> </body> </notes> <listOfReactants> <speciesReference species="s_0028" stoichiometry="1" constant="true"/> <speciesReference species="s_0539" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0019" stoichiometry="1" constant="true"/> <speciesReference species="s_0467" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0745"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000176" id="r_0737" name="mevalonate kinase (gtp)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YMR208W</p> </body> </notes> <listOfReactants> <speciesReference species="s_0028" stoichiometry="1" constant="true"/> <speciesReference species="s_0785" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0019" stoichiometry="1" constant="true"/> <speciesReference species="s_0739" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0745"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000176" id="r_0738" name="mevalonate kinase (UTP)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YMR208W</p> </body> </notes> <listOfReactants> <speciesReference species="s_0028" stoichiometry="1" constant="true"/> <speciesReference species="s_1559" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0019" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1538" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0745"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0739" sboTerm="SBO:0000176" id="r_0739" name="mevalonate pyrophoshate decarboxylase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YNR043W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0739"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01121"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0018" stoichiometry="1" constant="true"/> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0394" stoichiometry="1" constant="true"/> <speciesReference species="s_0456" stoichiometry="1" constant="true"/> <speciesReference species="s_0943" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0812"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0747" sboTerm="SBO:0000176" id="r_0747" name="MIPC synthase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:((YBR161W AND YBR036C) OR (YPL057C AND YBR036C))</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0747"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/12954640"/> <rdf:li rdf:resource="http://identifiers.org/pubmed/18296751"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0744" stoichiometry="1" constant="true"/> <speciesReference species="s_0895" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0740" stoichiometry="1" constant="true"/> <speciesReference species="s_1117" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0909"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0073"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0049"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0748" sboTerm="SBO:0000176" id="r_0748" name="MIPC synthase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:((YBR161W AND YBR036C) OR (YPL057C AND YBR036C))</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0748"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/12954640"/> <rdf:li rdf:resource="http://identifiers.org/pubmed/18296751"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0744" stoichiometry="1" constant="true"/> <speciesReference species="s_0898" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0740" stoichiometry="1" constant="true"/> <speciesReference species="s_1120" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0909"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0073"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0049"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0749" sboTerm="SBO:0000176" id="r_0749" name="MIPC synthase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:((YBR161W AND YBR036C) OR (YPL057C AND YBR036C))</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0749"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/12954640"/> <rdf:li rdf:resource="http://identifiers.org/pubmed/18296751"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0744" stoichiometry="1" constant="true"/> <speciesReference species="s_0907" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0740" stoichiometry="1" constant="true"/> <speciesReference species="s_1129" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0909"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0073"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0049"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0750" sboTerm="SBO:0000176" id="r_0750" name="MIPC synthase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:((YBR161W AND YBR036C) OR (YPL057C AND YBR036C))</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0750"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/12954640"/> <rdf:li rdf:resource="http://identifiers.org/pubmed/18296751"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0744" stoichiometry="1" constant="true"/> <speciesReference species="s_0910" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0740" stoichiometry="1" constant="true"/> <speciesReference species="s_1132" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0909"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0073"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0049"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0751" sboTerm="SBO:0000176" id="r_0751" name="MIPC synthase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:((YBR161W AND YBR036C) OR (YPL057C AND YBR036C))</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0751"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/12954640"/> <rdf:li rdf:resource="http://identifiers.org/pubmed/18296751"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0744" stoichiometry="1" constant="true"/> <speciesReference species="s_0901" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0740" stoichiometry="1" constant="true"/> <speciesReference species="s_1123" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0909"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0073"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0049"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0752" sboTerm="SBO:0000176" id="r_0752" name="MIPC synthase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:((YBR161W AND YBR036C) OR (YPL057C AND YBR036C))</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0752"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/12954640"/> <rdf:li rdf:resource="http://identifiers.org/pubmed/18296751"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0744" stoichiometry="1" constant="true"/> <speciesReference species="s_0904" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0740" stoichiometry="1" constant="true"/> <speciesReference species="s_1126" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0909"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0073"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0049"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0753" sboTerm="SBO:0000176" id="r_0753" name="MIPC synthase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:((YBR161W AND YBR036C) OR (YPL057C AND YBR036C))</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0753"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/12954640"/> <rdf:li rdf:resource="http://identifiers.org/pubmed/18296751"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0744" stoichiometry="1" constant="true"/> <speciesReference species="s_0913" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0740" stoichiometry="1" constant="true"/> <speciesReference species="s_1135" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0909"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0073"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0049"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0754" sboTerm="SBO:0000176" id="r_0754" name="MIPC synthase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:((YBR161W AND YBR036C) OR (YPL057C AND YBR036C))</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0754"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/12954640"/> <rdf:li rdf:resource="http://identifiers.org/pubmed/18296751"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0744" stoichiometry="1" constant="true"/> <speciesReference species="s_0916" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0740" stoichiometry="1" constant="true"/> <speciesReference species="s_1138" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0909"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0073"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0049"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0755" sboTerm="SBO:0000176" id="r_0755" name="MIPC synthase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:((YBR161W AND YBR036C) OR (YPL057C AND YBR036C))</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0755"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/12954640"/> <rdf:li rdf:resource="http://identifiers.org/pubmed/18296751"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0744" stoichiometry="1" constant="true"/> <speciesReference species="s_0919" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0740" stoichiometry="1" constant="true"/> <speciesReference species="s_1141" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0909"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0073"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0049"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0756" sboTerm="SBO:0000176" id="r_0756" name="MIPC synthase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:((YBR161W AND YBR036C) OR (YPL057C AND YBR036C))</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0756"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/12954640"/> <rdf:li rdf:resource="http://identifiers.org/pubmed/18296751"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0744" stoichiometry="1" constant="true"/> <speciesReference species="s_0922" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0740" stoichiometry="1" constant="true"/> <speciesReference species="s_1144" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0909"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0073"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0049"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0757" sboTerm="SBO:0000176" id="r_0757" name="myo-inositol 1-phosphatase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YHR046C OR YDR287W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0757"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01185"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/10844654"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0126" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1153" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0204"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0435"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000176" id="r_0758" name="myo-inositol-1-phosphate synthase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YJL153C</p> </body> </notes> <listOfReactants> <speciesReference species="s_0568" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0126" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0512"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0759" sboTerm="SBO:0000176" id="r_0759" name="N-acetyl-g-glutamyl-phosphate reductase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YER069W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0759"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03443"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0799" stoichiometry="1" constant="true"/> <speciesReference species="s_1191" stoichiometry="1" constant="true"/> <speciesReference species="s_1214" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0145" stoichiometry="1" constant="true"/> <speciesReference species="s_1210" stoichiometry="1" constant="true"/> <speciesReference species="s_1326" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0290"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0760" sboTerm="SBO:0000176" id="r_0760" name="N-acetylglucosamine-6-phosphate synthase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YFL017C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0760"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02058"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/9867860"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0373" stoichiometry="1" constant="true"/> <speciesReference species="s_0412" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0529" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1190" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0310"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0761" sboTerm="SBO:0000176" id="r_0761" name="N-acteylglutamate synthase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YMR062C OR YJL071W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0761"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00259"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0376" stoichiometry="1" constant="true"/> <speciesReference species="s_0993" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0532" stoichiometry="1" constant="true"/> <speciesReference species="s_0799" stoichiometry="1" constant="true"/> <speciesReference species="s_1192" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0498"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0729"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0762" sboTerm="SBO:0000176" id="r_0762" name="N-formyl-L-kynurenine amidohydrolase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDR428C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0762"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01959"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/18205391"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> <speciesReference species="s_1195" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0722" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1020" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0232"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0763" sboTerm="SBO:0000176" id="r_0763" name="N-formyltyrosine oxidase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YDR402C AND YDR403W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0763"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/8706696"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1196" stoichiometry="2" constant="true"/> <speciesReference species="s_1212" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1185" stoichiometry="1" constant="true"/> <speciesReference species="s_1207" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0228"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0230"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000176" id="r_0764" name="NAD diphosphatase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YGL067W</p> </body> </notes> <listOfReactants> <speciesReference species="s_0809" stoichiometry="1" constant="true"/> <speciesReference species="s_1202" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0426" stoichiometry="1" constant="true"/> <speciesReference species="s_0801" stoichiometry="2" constant="true"/> <speciesReference species="s_1228" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0336"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0765" sboTerm="SBO:0000176" id="r_0765" name="NAD kinase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YJR049C OR YEL041W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0765"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00104"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/15978040"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_1198" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0394" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1207" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0257"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0533"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0766" sboTerm="SBO:0000176" id="r_0766" name="NAD kinase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YJR049C OR YEL041W OR YPL188W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0766"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00104"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/15978040"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0437" stoichiometry="1" constant="true"/> <speciesReference species="s_1200" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0397" stoichiometry="1" constant="true"/> <speciesReference species="s_0799" stoichiometry="1" constant="true"/> <speciesReference species="s_1210" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0928"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0258"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0534"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0767" sboTerm="SBO:0000176" id="r_0767" name="NAD nucleosidase nuclear" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YPL015C OR YOL068C OR YDL042C OR YDR191W OR YOR025W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0767"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00102"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/17482543"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0808" stoichiometry="1" constant="true"/> <speciesReference species="s_1201" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0402" stoichiometry="1" constant="true"/> <speciesReference species="s_0800" stoichiometry="1" constant="true"/> <speciesReference species="s_1217" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0130"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0189"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0845"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0833"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0902"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0768" sboTerm="SBO:0000176" id="r_0768" name="NAD synthase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YHR074W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0768"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/12771147"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0999" stoichiometry="1" constant="true"/> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_0591" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0423" stoichiometry="1" constant="true"/> <speciesReference species="s_0633" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1198" stoichiometry="1" constant="true"/> <speciesReference species="s_0991" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0441"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0769" sboTerm="SBO:0000176" id="r_0769" name="NAD synthase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YHR074W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0769"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/12771147"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_1001" stoichiometry="1" constant="true"/> <speciesReference species="s_0438" stoichiometry="1" constant="true"/> <speciesReference species="s_0593" stoichiometry="1" constant="true"/> <speciesReference species="s_0808" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0425" stoichiometry="1" constant="true"/> <speciesReference species="s_0637" stoichiometry="1" constant="true"/> <speciesReference species="s_0800" stoichiometry="1" constant="true"/> <speciesReference species="s_1201" stoichiometry="1" constant="true"/> <speciesReference species="s_0994" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0442"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0770" sboTerm="SBO:0000176" id="r_0770" name="NADH dehydrogenase, cytosolic/mitochondrial" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YMR145C OR YDL085W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0770"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/9733747"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1203" stoichiometry="1" constant="true"/> <speciesReference species="s_1537" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1198" stoichiometry="1" constant="true"/> <speciesReference species="s_1535" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0139"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0737"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0771" sboTerm="SBO:0000176" id="r_0771" name="NADH kinase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YJR049C OR YEL041W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0771"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00105"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/15978040"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_1203" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0394" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1212" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0257"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0533"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0772" sboTerm="SBO:0000176" id="r_0772" name="NADH kinase mitochondrial" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YJR049C OR YEL041W OR YPL188W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0772"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00105"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/15978040"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0437" stoichiometry="1" constant="true"/> <speciesReference species="s_1205" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0397" stoichiometry="1" constant="true"/> <speciesReference species="s_0799" stoichiometry="1" constant="true"/> <speciesReference species="s_1214" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0928"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0258"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0534"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000176" id="r_0773" name="NADH:ubiquinone oxidoreductase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YML120C</p> </body> </notes> <listOfReactants> <speciesReference species="s_0799" stoichiometry="2.5" constant="true"/> <speciesReference species="s_1205" stoichiometry="1" constant="true"/> <speciesReference species="s_1537" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0794" stoichiometry="1.5" constant="true"/> <speciesReference species="s_1200" stoichiometry="1" constant="true"/> <speciesReference species="s_1535" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0714"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0774" sboTerm="SBO:0000176" id="r_0774" name="NAPRtase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YOR209C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0774"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01724"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1219" stoichiometry="1" constant="true"/> <speciesReference species="s_1386" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0633" stoichiometry="1" constant="true"/> <speciesReference species="s_1222" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0876"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0775" sboTerm="SBO:0000176" id="r_0775" name="NAPRtase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YOR209C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0775"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01724"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0799" stoichiometry="1" constant="true"/> <speciesReference species="s_1221" stoichiometry="1" constant="true"/> <speciesReference species="s_1387" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0636" stoichiometry="1" constant="true"/> <speciesReference species="s_1223" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0877"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000176" id="r_0781" name="nicotinamidase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YGL037C</p> </body> </notes> <listOfReactants> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> <speciesReference species="s_1216" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0419" stoichiometry="1" constant="true"/> <speciesReference species="s_1219" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0331"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0782" sboTerm="SBO:0000176" id="r_0782" name="nicotinamide N-methyltransferase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YLR285W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0782"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01269"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/12736687"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_1216" stoichiometry="1" constant="true"/> <speciesReference species="s_1416" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0087" stoichiometry="1" constant="true"/> <speciesReference species="s_1413" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0670"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0783" sboTerm="SBO:0000176" id="r_0783" name="nicotinamide-nucleotide adenylyltransferase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YLR328W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0783"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00137"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/15078171"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1224" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0633" stoichiometry="1" constant="true"/> <speciesReference species="s_1198" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0680"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0784" sboTerm="SBO:0000176" id="r_0784" name="nicotinamide-nucleotide adenylyltransferase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YGR010W OR YLR328W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0784"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00137"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/15078171"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0438" stoichiometry="1" constant="true"/> <speciesReference species="s_0800" stoichiometry="1" constant="true"/> <speciesReference species="s_1227" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0637" stoichiometry="1" constant="true"/> <speciesReference species="s_1201" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0681"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0359"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0785" sboTerm="SBO:0000176" id="r_0785" name="nicotinate-nucleotide adenylyltransferase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YGR010W OR YLR328W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0785"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03005"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/15078171"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1222" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0591" stoichiometry="1" constant="true"/> <speciesReference species="s_0633" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0680"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0358"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0786" sboTerm="SBO:0000176" id="r_0786" name="nicotinate-nucleotide diphosphorylase (carboxylating)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YFR047C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0786"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03348"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0794" stoichiometry="2" constant="true"/> <speciesReference species="s_1386" stoichiometry="1" constant="true"/> <speciesReference species="s_1403" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0456" stoichiometry="1" constant="true"/> <speciesReference species="s_0633" stoichiometry="1" constant="true"/> <speciesReference species="s_1222" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0323"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0787" sboTerm="SBO:0000176" id="r_0787" name="nicotinate-nucleotide diphosphorylase (carboxylating)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YFR047C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0787"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03348"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0799" stoichiometry="2" constant="true"/> <speciesReference species="s_1387" stoichiometry="1" constant="true"/> <speciesReference species="s_1404" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0460" stoichiometry="1" constant="true"/> <speciesReference species="s_0636" stoichiometry="1" constant="true"/> <speciesReference species="s_1223" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0324"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0788" sboTerm="SBO:0000176" id="r_0788" name="nucleoside diphosphatase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YER005W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0788"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00122"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/10409709"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0394" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0423" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0271"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0789" sboTerm="SBO:0000176" id="r_0789" name="nucleoside diphosphatase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YER005W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0789"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00328"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/10409709"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0739" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0782" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0271"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0790" sboTerm="SBO:0000176" id="r_0790" name="nucleoside diphosphatase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YER005W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0790"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00155"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/10409709"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> <speciesReference species="s_1538" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> <speciesReference species="s_1545" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0271"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0791" sboTerm="SBO:0000176" id="r_0791" name="nucleoside diphosphatase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YEL042W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0791"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00155"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0806" stoichiometry="1" constant="true"/> <speciesReference species="s_1539" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0797" stoichiometry="1" constant="true"/> <speciesReference species="s_1325" stoichiometry="1" constant="true"/> <speciesReference species="s_1546" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0259"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0792" sboTerm="SBO:0000176" id="r_0792" name="nucleoside diphosphatase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YER005W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0792"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00514"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0467" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0526" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0271"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0793" sboTerm="SBO:0000176" id="r_0793" name="nucleoside diphosphatase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YER005W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0793"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00961"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> <speciesReference species="s_0846" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_0849" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0271"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0795" sboTerm="SBO:0000176" id="r_0795" name="nucleoside diphosphate kinase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YKL067W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0795"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00570"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_0467" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0394" stoichiometry="1" constant="true"/> <speciesReference species="s_0539" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0568"/> 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<p>GENE_ASSOCIATION:YER005W</p> </body> </notes> <listOfReactants> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> <speciesReference species="s_0950" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_0846" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0271"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0810" sboTerm="SBO:0000176" id="r_0810" name="nucleoside-diphosphatase (GDP), Golgi" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YEL042W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0810"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00328"/> 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constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0729"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000176" id="r_0819" name="ornithine transaminase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YLR438W</p> </body> </notes> <listOfReactants> <speciesReference species="s_0180" stoichiometry="1" constant="true"/> <speciesReference species="s_1266" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0991" stoichiometry="1" constant="true"/> <speciesReference species="s_0997" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0694"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0820" sboTerm="SBO:0000176" id="r_0820" name="orotate phosphoribosyltransferase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YML106W OR YMR271C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0820"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01870"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0633" stoichiometry="1" constant="true"/> <speciesReference species="s_1270" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1269" stoichiometry="1" constant="true"/> <speciesReference species="s_1386" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0755"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0712"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0821" sboTerm="SBO:0000176" id="r_0821" name="orotidine-5'-phosphate decarboxylase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YEL021W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0821"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00965"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1270" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0456" stoichiometry="1" constant="true"/> <speciesReference species="s_1545" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0249"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0831" sboTerm="SBO:0000176" id="r_0831" name="oxoglutarate dehydrogenase (dihydrolipoamide S-succinyltransferase)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YIL125W AND YDR148C AND YFL018C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0831"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/2178788"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0532" stoichiometry="1" constant="true"/> <speciesReference species="s_1411" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0627" stoichiometry="1" constant="true"/> <speciesReference species="s_1464" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0477"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0185"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0311"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0832" sboTerm="SBO:0000176" id="r_0832" name="oxoglutarate dehydrogenase (lipoamide)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YIL125W AND YDR148C AND YFL018C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0832"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/10224250"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0182" stoichiometry="1" constant="true"/> <speciesReference species="s_0799" stoichiometry="1" constant="true"/> <speciesReference species="s_1097" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0460" stoichiometry="1" constant="true"/> <speciesReference species="s_1411" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0477"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0185"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0311"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0841" sboTerm="SBO:0000176" id="r_0841" name="pantetheine-phosphate adenylyltransferase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YGR277C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0841"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03035"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/19266201"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1307" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0197" stoichiometry="1" constant="true"/> <speciesReference species="s_0633" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0411"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0842" sboTerm="SBO:0000176" id="r_0842" name="pantothenate kinase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDR531W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0842"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03018"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0031" stoichiometry="1" constant="true"/> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0017" stoichiometry="1" constant="true"/> <speciesReference species="s_0394" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0245"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0843" sboTerm="SBO:0000176" id="r_0843" name="pantothenate synthase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YIL145C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0843"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02473"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0030" stoichiometry="1" constant="true"/> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_0441" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0031" stoichiometry="1" constant="true"/> <speciesReference species="s_0423" stoichiometry="1" constant="true"/> <speciesReference species="s_0633" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0479"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0844" sboTerm="SBO:0000176" id="r_0844" name="peroxisomal acyl-CoA thioesterase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YJR019C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0844"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/10092594"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0605" stoichiometry="1" constant="true"/> <speciesReference species="s_0809" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0534" stoichiometry="1" constant="true"/> <speciesReference species="s_0600" stoichiometry="1" constant="true"/> <speciesReference species="s_0801" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0529"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0845" sboTerm="SBO:0000176" id="r_0845" name="peroxisomal acyl-CoA thioesterase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YJR019C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0845"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/10092594"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0809" stoichiometry="1" constant="true"/> <speciesReference species="s_1076" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0534" stoichiometry="1" constant="true"/> <speciesReference species="s_0801" stoichiometry="1" constant="true"/> <speciesReference species="s_1070" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0529"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0847" sboTerm="SBO:0000176" id="r_0847" name="peroxisomal acyl-CoA thioesterase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YJR019C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0847"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01274"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/10092594"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0809" stoichiometry="1" constant="true"/> <speciesReference species="s_1305" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0534" stoichiometry="1" constant="true"/> <speciesReference species="s_0801" stoichiometry="1" constant="true"/> <speciesReference species="s_1291" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0529"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0848" sboTerm="SBO:0000176" id="r_0848" name="peroxisomal acyl-CoA thioesterase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YJR019C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0848"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/10092594"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0809" stoichiometry="1" constant="true"/> <speciesReference species="s_1179" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0534" stoichiometry="1" constant="true"/> <speciesReference species="s_0801" stoichiometry="1" constant="true"/> <speciesReference species="s_1166" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0529"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0849" sboTerm="SBO:0000176" id="r_0849" name="peroxisomal acyl-CoA thioesterase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YJR019C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0849"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R08174"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/10092594"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0809" stoichiometry="1" constant="true"/> <speciesReference species="s_1457" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0534" stoichiometry="1" constant="true"/> <speciesReference species="s_0801" stoichiometry="1" constant="true"/> <speciesReference species="s_1451" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0529"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0850" sboTerm="SBO:0000176" id="r_0850" name="peroxisomal acyl-CoA thioesterase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YJR019C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0850"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/10092594"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0809" stoichiometry="1" constant="true"/> <speciesReference species="s_1258" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0534" stoichiometry="1" constant="true"/> <speciesReference species="s_0801" stoichiometry="1" constant="true"/> <speciesReference species="s_1253" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0529"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0851" sboTerm="SBO:0000176" id="r_0851" name="phenylalanine transaminase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YGL202W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0851"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00694"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/9491082"/> <rdf:li rdf:resource="http://identifiers.org/pubmed/9491083"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0180" stoichiometry="1" constant="true"/> <speciesReference species="s_1032" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0951" stoichiometry="1" constant="true"/> <speciesReference species="s_0991" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0348"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0852" sboTerm="SBO:0000176" id="r_0852" name="phenylalanyl-tRNA synthetase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YLR060W AND YFL022C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0852"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03660"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/3049607"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_1032" stoichiometry="1" constant="true"/> <speciesReference species="s_1604" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0423" stoichiometry="1" constant="true"/> <speciesReference species="s_0633" stoichiometry="1" constant="true"/> <speciesReference species="s_1314" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0639"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0312"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0853" sboTerm="SBO:0000176" id="r_0853" name="phenylalanyl-tRNA synthetase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YPR047W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0853"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03660"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/3029120"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0437" stoichiometry="1" constant="true"/> <speciesReference species="s_1034" stoichiometry="1" constant="true"/> <speciesReference species="s_1605" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0424" stoichiometry="1" constant="true"/> <speciesReference species="s_0636" stoichiometry="1" constant="true"/> <speciesReference species="s_1315" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0958"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0854" sboTerm="SBO:0000176" id="r_0854" name="phenylpyruvate decarboxylase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDR380W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0854"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01377"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/12902239"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_0951" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0456" stoichiometry="1" constant="true"/> <speciesReference species="s_1318" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0224"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0855" sboTerm="SBO:0000176" id="r_0855" name="phopshoribosylaminoimidazole synthetase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YGL234W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0855"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R04208"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0302" stoichiometry="1" constant="true"/> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0300" stoichiometry="1" constant="true"/> <speciesReference species="s_0394" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="2" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0352"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0882" sboTerm="SBO:0000176" id="r_0882" name="phosphoacetylglucosamine mutase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YEL058W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0882"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R08193"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/8174553"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_1190" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1189" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0265"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0883" sboTerm="SBO:0000176" id="r_0883" name="phosphoadenylyl-sulfate reductase (thioredoxin)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:((YPR167C AND YGR209C) OR (YLR043C AND YPR167C))</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0883"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/2203779"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0201" stoichiometry="1" constant="true"/> <speciesReference species="s_1616" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0390" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="2" constant="true"/> <speciesReference species="s_1469" stoichiometry="1" constant="true"/> <speciesReference species="s_1620" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="s_1616"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0975"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0398"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0884" sboTerm="SBO:0000176" id="r_0884" name="phosphoenolpyruvate carboxykinase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YKR097W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0884"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00341"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_1271" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0394" stoichiometry="1" constant="true"/> <speciesReference species="s_0456" stoichiometry="1" constant="true"/> <speciesReference species="s_1360" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0612"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0885" sboTerm="SBO:0000176" id="r_0885" name="phosphoethanolamine cytidyltransferase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YGR007W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0885"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02038"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0539" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1239" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0474" stoichiometry="1" constant="true"/> <speciesReference species="s_0633" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0357"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0886" sboTerm="SBO:0000176" id="r_0886" name="phosphofructokinase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YGR240C AND YMR205C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0886"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00756"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/3007939"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_0557" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0394" stoichiometry="1" constant="true"/> <speciesReference species="s_0555" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0401"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0743"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0887" sboTerm="SBO:0000176" id="r_0887" name="phosphofructokinase (s7p)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YGR240C AND YMR205C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0887"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01843"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_1427" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0394" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1426" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0401"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0743"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0888" sboTerm="SBO:0000176" id="r_0888" name="phosphoglucomutase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YMR278W OR YMR105C OR YKL127W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0888"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R08639"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/18042468"/> <rdf:li rdf:resource="http://identifiers.org/pubmed/8119301"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0568" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0567" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0576"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0757"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0733"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0889" sboTerm="SBO:0000176" id="r_0889" name="phosphogluconate dehydrogenase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YGR256W OR YHR183W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0889"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01528"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/24626"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0340" stoichiometry="1" constant="true"/> <speciesReference species="s_1207" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0456" stoichiometry="1" constant="true"/> <speciesReference species="s_0577" stoichiometry="1" constant="true"/> <speciesReference species="s_1212" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0455"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0407"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0890" sboTerm="SBO:0000176" id="r_0890" name="phosphoglucosamine mutase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YEL058W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0890"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02060"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/8174553"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0411" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0412" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0265"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0891" sboTerm="SBO:0000176" id="r_0891" name="phosphoglycerate dehydrogenase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YIL074C OR YER081W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0891"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01513"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/12525494"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0260" stoichiometry="1" constant="true"/> <speciesReference species="s_1198" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0258" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1203" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0294"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0469"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0892" sboTerm="SBO:0000176" id="r_0892" name="phosphoglycerate kinase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YCR012W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0892"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01512"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/6347186"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0075" stoichiometry="1" constant="true"/> <speciesReference species="s_0394" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0260" stoichiometry="1" constant="true"/> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0113"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0893" sboTerm="SBO:0000176" id="r_0893" name="phosphoglycerate mutase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YKL152C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0893"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01518"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/3033435"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0260" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0188" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0582"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0902" sboTerm="SBO:0000176" id="r_0902" name="phosphomannomutase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YFL045C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0902"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01818"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0573" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0574" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0314"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0903" sboTerm="SBO:0000176" id="r_0903" name="phosphomethylpyrimidine kinase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YPL258C OR YPR121W OR YOL055C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0903"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R04509"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/10383756"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0268" stoichiometry="1" constant="true"/> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0267" stoichiometry="1" constant="true"/> <speciesReference species="s_0394" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0825"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0966"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0939"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0904" sboTerm="SBO:0000176" id="r_0904" name="phosphomevalonate kinase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YMR220W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0904"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03245"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0019" stoichiometry="1" constant="true"/> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0018" stoichiometry="1" constant="true"/> <speciesReference species="s_0394" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0747"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0905" sboTerm="SBO:0000176" id="r_0905" name="phosphopantothenate-cysteine ligase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YIL083C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0905"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R04231"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0017" stoichiometry="1" constant="true"/> <speciesReference species="s_0539" stoichiometry="1" constant="true"/> <speciesReference species="s_0981" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0526" stoichiometry="1" constant="true"/> <speciesReference species="s_0633" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1188" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0471"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0906" sboTerm="SBO:0000176" id="r_0906" name="phosphopantothenoylcysteine decarboxylase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YKL088W OR (YKL088W AND YKR072C) OR (YKL088W AND YOR054C) OR (YKL088W AND YKR072C AND YOR054C))</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0906"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03269"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1188" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0456" stoichiometry="1" constant="true"/> <speciesReference species="s_1307" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0572"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0847"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0609"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000176" id="r_0907" name="phosphopentomutase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YMR105C OR YKL127W)</p> </body> </notes> <listOfReactants> <speciesReference species="s_0415" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1408" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0576"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0733"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0908" sboTerm="SBO:0000176" id="r_0908" name="phosphoribosyl amino imidazolesuccinocarbozamide synthetase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YAR015W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0908"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R04591"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_0973" stoichiometry="1" constant="true"/> <speciesReference species="s_1364" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0299" stoichiometry="1" constant="true"/> <speciesReference species="s_0394" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0017"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0909" sboTerm="SBO:0000176" id="r_0909" name="phosphoribosyl-AMP cyclohydrolase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YCL030C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0909"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R04037"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/7049842"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0078" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0077" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0103"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0910" sboTerm="SBO:0000176" id="r_0910" name="phosphoribosyl-ATP pyrophosphatase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YCL030C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0910"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R04035"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0326" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0078" stoichiometry="1" constant="true"/> <speciesReference species="s_0633" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0103"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0911" sboTerm="SBO:0000176" id="r_0911" name="phosphoribosylaminoimidazole-carboxylase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YOR128C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0911"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R04209"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0300" stoichiometry="1" constant="true"/> <speciesReference species="s_0456" stoichiometry="1" constant="true"/> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1364" stoichiometry="1" constant="true"/> <speciesReference species="s_0394" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0860"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0912" sboTerm="SBO:0000176" id="r_0912" name="phosphoribosylaminoimidazolecarboxamide formyltransferase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YMR120C OR YLR028C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0912"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R04560"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0120" stoichiometry="1" constant="true"/> <speciesReference species="s_0403" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1365" stoichiometry="1" constant="true"/> <speciesReference species="s_1487" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0631"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0736"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0913" sboTerm="SBO:0000176" id="r_0913" name="phosphoribosylanthranilate isomerase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDR007W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0913"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03509"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/348687"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_1187" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0076" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0165"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0914" sboTerm="SBO:0000176" id="r_0914" name="phosphoribosylglycinamidine synthetase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YGL234W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0914"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R04144"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0327" stoichiometry="1" constant="true"/> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_1003" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0325" stoichiometry="1" constant="true"/> <speciesReference species="s_0394" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0352"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0915" sboTerm="SBO:0000176" id="r_0915" name="phosphoribosylpyrophosphate amidotransferase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YMR300C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0915"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01072"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> <speciesReference species="s_0999" stoichiometry="1" constant="true"/> <speciesReference species="s_1386" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0327" stoichiometry="1" constant="true"/> <speciesReference species="s_0633" stoichiometry="1" constant="true"/> <speciesReference species="s_0991" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0763"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0916" sboTerm="SBO:0000176" id="r_0916" name="phosphoribosylpyrophosphate synthetase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:((YHL011C AND YKL181W) OR (YOL061W AND YBL068W) OR (YOL061W AND YER099C))</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0916"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/10212224"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_1408" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0423" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1386" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0030"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0299"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0418"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0585"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0829"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0917" sboTerm="SBO:0000176" id="r_0917" name="phosphoserine phosphatase (L-serine)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YGR208W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0917"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00582"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/1326413"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0259" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1039" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0397"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0918" sboTerm="SBO:0000176" id="r_0918" name="phosphoserine transaminase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YOR184W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0918"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R04173"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/8017107"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0258" stoichiometry="1" constant="true"/> <speciesReference species="s_0991" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0180" stoichiometry="1" constant="true"/> <speciesReference species="s_0259" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0872"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0919" sboTerm="SBO:0000176" id="r_0919" name="phytoceramidase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YBR183W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0919"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/10702247"/> <rdf:li rdf:resource="http://identifiers.org/pubmed/18296751"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_1085" stoichiometry="1" constant="true"/> <speciesReference species="s_1366" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0481" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0077"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0920" sboTerm="SBO:0000176" id="r_0920" name="phytoceramidase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDR402C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0920"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R06527"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0507" stoichiometry="1" constant="true"/> <speciesReference species="s_1366" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0484" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0229"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0921" sboTerm="SBO:0000176" id="r_0921" name="Phytosphingosine phosphate lyase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDR294C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0921"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/18296751"/> <rdf:li rdf:resource="http://identifiers.org/pubmed/9334171"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_1367" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0161" stoichiometry="1" constant="true"/> <speciesReference species="s_1240" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0205"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0922" sboTerm="SBO:0000176" id="r_0922" name="phytosphingosine synthesis" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDR297W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0922"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R06525"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/18296751"/> <rdf:li rdf:resource="http://identifiers.org/pubmed/9368039"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0795" stoichiometry="1" constant="true"/> <speciesReference species="s_1213" stoichiometry="1" constant="true"/> <speciesReference species="s_1276" stoichiometry="1" constant="true"/> <speciesReference species="s_1445" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0804" stoichiometry="1" constant="true"/> <speciesReference species="s_1208" stoichiometry="1" constant="true"/> <speciesReference species="s_1366" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0206"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0929" sboTerm="SBO:0000176" id="r_0929" name="polyamine oxidase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YMR020W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0929"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/12670477"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> <speciesReference species="s_1180" stoichiometry="1" constant="true"/> <speciesReference species="s_1275" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0208" stoichiometry="1" constant="true"/> <speciesReference species="s_0837" stoichiometry="1" constant="true"/> <speciesReference species="s_1193" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0725"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0935" sboTerm="SBO:0000176" id="r_0935" name="porphobilinogen synthase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YGL040C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0935"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00036"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0315" stoichiometry="2" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="2" constant="true"/> <speciesReference species="s_1372" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0332"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0936" sboTerm="SBO:0000176" id="r_0936" name="poylamine oxidase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YMR020W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0936"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/12670477"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> <speciesReference species="s_1181" stoichiometry="1" constant="true"/> <speciesReference species="s_1275" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0208" stoichiometry="1" constant="true"/> <speciesReference species="s_0837" stoichiometry="1" constant="true"/> <speciesReference species="s_1180" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0725"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0937" sboTerm="SBO:0000176" id="r_0937" name="poylamine oxidase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YMR020W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0937"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/12670477"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> <speciesReference species="s_1275" stoichiometry="1" constant="true"/> <speciesReference species="s_1442" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0208" stoichiometry="1" constant="true"/> <speciesReference species="s_0837" stoichiometry="1" constant="true"/> <speciesReference species="s_1439" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0725"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0938" sboTerm="SBO:0000176" id="r_0938" name="prephenate dehydratase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YNL316C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0938"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01373"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/7502583"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1377" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0456" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> <speciesReference species="s_0951" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0802"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0939" sboTerm="SBO:0000176" id="r_0939" name="prephenate dehydrogenase (NADP)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YBR166C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0939"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01730"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/2697638"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_1207" stoichiometry="1" constant="true"/> <speciesReference species="s_1377" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0204" stoichiometry="1" constant="true"/> <speciesReference species="s_0456" stoichiometry="1" constant="true"/> <speciesReference species="s_1212" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0074"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000176" id="r_0940" name="proline oxidase (NAD)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YLR142W</p> </body> </notes> <listOfReactants> <speciesReference species="s_1037" stoichiometry="1" constant="true"/> <speciesReference species="s_0688" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0119" stoichiometry="1" constant="true"/> <speciesReference species="s_0690" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0649"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0941" sboTerm="SBO:0000176" id="r_0941" name="prolyl-tRNA synthetase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YHR020W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0941"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03661"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_1035" stoichiometry="1" constant="true"/> <speciesReference species="s_1606" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0423" stoichiometry="1" constant="true"/> <speciesReference species="s_0633" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1379" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0985"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0942" sboTerm="SBO:0000176" id="r_0942" name="protoporphyrinogen oxidase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YER014W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0942"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03222"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_1278" stoichiometry="3" constant="true"/> <speciesReference species="s_1385" stoichiometry="2" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0807" stoichiometry="6" constant="true"/> <speciesReference species="s_1383" stoichiometry="2" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0272"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0943" sboTerm="SBO:0000176" id="r_0943" name="purine-nucleoside phosphorylase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YDR400W AND YLR209C AND YLR017W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0943"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/17482543"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_1218" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0415" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1216" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0227"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0661"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0627"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000176" id="r_0944" name="purine-nucleoside phosphorylase (adenosine)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YLR209C</p> </body> </notes> <listOfReactants> <speciesReference species="s_0386" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0383" stoichiometry="1" constant="true"/> <speciesReference species="s_0415" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0661"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000176" id="r_0945" name="purine-nucleoside phosphorylase (adenosine)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YLR209C</p> </body> </notes> <listOfReactants> <speciesReference species="s_0388" stoichiometry="1" constant="true"/> <speciesReference species="s_1326" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0385" stoichiometry="1" constant="true"/> <speciesReference species="s_0416" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0662"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0946" sboTerm="SBO:0000176" id="r_0946" name="purine-nucleoside phosphorylase (deoxyadenosine)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YLR209C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0946"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02557"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0132" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0151" stoichiometry="1" constant="true"/> <speciesReference species="s_0383" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0661"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0947" sboTerm="SBO:0000176" id="r_0947" name="purine-nucleoside phosphorylase (deoxyguanosine)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YLR209C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0947"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01969"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0134" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0151" stoichiometry="1" constant="true"/> <speciesReference species="s_0787" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0661"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0948" sboTerm="SBO:0000176" id="r_0948" name="purine-nucleoside phosphorylase (deoxyinosine)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YLR209C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0948"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02748"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0136" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0151" stoichiometry="1" constant="true"/> <speciesReference species="s_0843" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0661"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000176" id="r_0949" name="purine-nucleoside phosphorylase (Guanosine)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YLR209C</p> </body> </notes> <listOfReactants> <speciesReference species="s_0790" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0415" stoichiometry="1" constant="true"/> <speciesReference species="s_0787" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0661"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000176" id="r_0950" name="purine-nucleoside phosphorylase (Guanosine)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YLR209C</p> </body> </notes> <listOfReactants> <speciesReference species="s_0792" stoichiometry="1" constant="true"/> <speciesReference species="s_1326" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0416" stoichiometry="1" constant="true"/> <speciesReference species="s_0789" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0662"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000176" id="r_0951" name="purine-nucleoside phosphorylase (inosine)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YLR209C</p> </body> </notes> <listOfReactants> <speciesReference species="s_0856" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0415" stoichiometry="1" constant="true"/> <speciesReference species="s_0843" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0661"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000176" id="r_0952" name="purine-nucleoside phosphorylase (Xanthosine)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YLR209C</p> </body> </notes> <listOfReactants> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> <speciesReference species="s_1563" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0357" stoichiometry="1" constant="true"/> <speciesReference species="s_0415" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0661"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000176" id="r_0953" name="pyridoxal oxidase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YBR035C</p> </body> </notes> <listOfReactants> <speciesReference species="s_0419" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="2" constant="true"/> <speciesReference species="s_1275" stoichiometry="0.5" constant="true"/> <speciesReference species="s_1392" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0837" stoichiometry="2" constant="true"/> <speciesReference species="s_1394" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0048"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000176" id="r_0954" name="pyridoxamine 5'-phosphate oxidase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YBR035C</p> </body> </notes> <listOfReactants> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> <speciesReference species="s_1275" stoichiometry="1" constant="true"/> <speciesReference species="s_1395" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0419" stoichiometry="1" constant="true"/> <speciesReference species="s_0837" stoichiometry="1" constant="true"/> <speciesReference species="s_1393" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0048"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0955" sboTerm="SBO:0000176" id="r_0955" name="pyridoxine 5'-phosphate oxidase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YBR035C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0955"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00278"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_1275" stoichiometry="1" constant="true"/> <speciesReference species="s_1398" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0837" stoichiometry="1" constant="true"/> <speciesReference species="s_1393" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0048"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0956" sboTerm="SBO:0000176" id="r_0956" name="pyridoxine oxidase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YBR035C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0956"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01711"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_1275" stoichiometry="1" constant="true"/> <speciesReference species="s_1396" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0837" stoichiometry="1" constant="true"/> <speciesReference species="s_1392" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0048"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000176" id="r_0957" name="pyrroline-5-carboxylate reductase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YER023W</p> </body> </notes> <listOfReactants> <speciesReference species="s_0118" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="2" constant="true"/> <speciesReference species="s_1212" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1035" stoichiometry="1" constant="true"/> <speciesReference species="s_1207" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0276"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0958" sboTerm="SBO:0000176" id="r_0958" name="pyruvate carboxylase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YBR218C OR YGL062W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0958"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00344"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_0445" stoichiometry="1" constant="true"/> <speciesReference species="s_1399" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0394" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1271" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0334"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0084"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0959" sboTerm="SBO:0000176" id="r_0959" name="pyruvate decarboxylase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YLR134W OR YGR087C OR YLR044C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0959"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00224"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1399" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0359" stoichiometry="1" constant="true"/> <speciesReference species="s_0456" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0370"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0636"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0647"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0960" sboTerm="SBO:0000176" id="r_0960" name="pyruvate decarboxylase (acetoin-forming)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YLR134W OR YGR087C OR YLR044C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0960"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/12902239"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0359" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1399" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0020" stoichiometry="1" constant="true"/> <speciesReference species="s_0456" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0370"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0636"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0647"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0961" sboTerm="SBO:0000176" id="r_0961" name="pyruvate dehydrogenase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YBR221C AND YER178W AND YFL018C AND YGR193C AND YNL071W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0961"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00209"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/8433986"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0532" stoichiometry="1" constant="true"/> <speciesReference species="s_1200" stoichiometry="1" constant="true"/> <speciesReference species="s_1401" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0376" stoichiometry="1" constant="true"/> <speciesReference species="s_0460" stoichiometry="1" constant="true"/> <speciesReference species="s_1205" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0085"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0306"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0393"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0311"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0775"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0962" sboTerm="SBO:0000176" id="r_0962" name="pyruvate kinase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YOR347C OR YAL038W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0962"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00200"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/6185493"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0394" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1360" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_1399" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0011"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0895"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000176" id="r_0963" name="quinone oxidoreductase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YOR125C AND YOL096C AND YML110C AND YGL119W AND YGR255C AND YDR204W AND YLR201C)</p> </body> </notes> <listOfReactants> <speciesReference species="s_0156" stoichiometry="1" constant="true"/> <speciesReference species="s_0799" stoichiometry="1" constant="true"/> <speciesReference species="s_1205" stoichiometry="1" constant="true"/> <speciesReference species="s_1278" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0154" stoichiometry="1" constant="true"/> <speciesReference species="s_0807" stoichiometry="1" constant="true"/> <speciesReference species="s_1200" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0858"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0835"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0713"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0339"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0406"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0191"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0660"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0964" sboTerm="SBO:0000185" id="r_0964" name="reduced glutathione via ABC system" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDR135C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0964"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/9729482"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> <speciesReference species="s_0750" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0394" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_0753" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0183"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0965" sboTerm="SBO:0000176" id="r_0965" name="riboflavin kinase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDR236C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0965"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00549"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_1405" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0394" stoichiometry="1" constant="true"/> <speciesReference species="s_0714" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0197"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0966" sboTerm="SBO:0000176" id="r_0966" name="riboflavin kinase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDR236C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0966"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00549"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0437" stoichiometry="1" constant="true"/> <speciesReference species="s_1407" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0397" stoichiometry="1" constant="true"/> <speciesReference species="s_0716" stoichiometry="1" constant="true"/> <speciesReference species="s_0799" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0198"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0967" sboTerm="SBO:0000176" id="r_0967" name="riboflavin synthase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YOL143C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0967"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R04457"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0158" stoichiometry="1" constant="true"/> <speciesReference species="s_0314" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0328" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="2" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0841"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0968" sboTerm="SBO:0000176" id="r_0968" name="riboflavin synthase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YBR256C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0968"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00066"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0328" stoichiometry="2" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0314" stoichiometry="1" constant="true"/> <speciesReference species="s_1405" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0090"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0969" sboTerm="SBO:0000176" id="r_0969" name="ribokinase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YCR036W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0969"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/1964349"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_0575" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0394" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1408" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0119"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0970" sboTerm="SBO:0000176" id="r_0970" name="ribonucleoside-triphosphate reductase (ATP)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YGR209C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0970"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02014"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_1616" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0586" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> <speciesReference species="s_1620" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0398"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0971" sboTerm="SBO:0000176" id="r_0971" name="ribonucleoside-triphosphate reductase (CTP)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YGR209C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0971"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02022"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0539" stoichiometry="1" constant="true"/> <speciesReference species="s_1616" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0590" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> <speciesReference species="s_1620" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0398"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0972" sboTerm="SBO:0000176" id="r_0972" name="ribonucleoside-triphosphate reductase (GTP)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YGR209C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0972"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02020"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0785" stoichiometry="1" constant="true"/> <speciesReference species="s_1616" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0617" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> <speciesReference species="s_1620" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0398"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0973" sboTerm="SBO:0000176" id="r_0973" name="ribonucleoside-triphosphate reductase (UTP)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YGR209C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0973"> <bqbiol:is> <rdf:Bag> <rdf:li 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name="ribonucleotide reductase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YER070W OR YGR180C OR YJL026W OR YIL066C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0975"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02017"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0398" stoichiometry="1" constant="true"/> <speciesReference species="s_1618" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0583" stoichiometry="1" constant="true"/> <speciesReference species="s_0808" stoichiometry="1" constant="true"/> <speciesReference species="s_1622" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0468"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0493"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0388"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0292"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0976" sboTerm="SBO:0000176" id="r_0976" name="ribonucleotide reductase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YER070W OR YGR180C OR YJL026W OR YIL066C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0976"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02024"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0467" stoichiometry="1" constant="true"/> <speciesReference species="s_1616" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0587" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> <speciesReference species="s_1620" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0467"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0492"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0387"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0291"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0977" sboTerm="SBO:0000176" id="r_0977" name="ribonucleotide reductase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YER070W OR YGR180C OR YJL026W OR YIL066C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0977"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02024"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0468" stoichiometry="1" constant="true"/> <speciesReference species="s_1618" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0588" stoichiometry="1" constant="true"/> <speciesReference species="s_0808" stoichiometry="1" constant="true"/> <speciesReference species="s_1622" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0468"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0493"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0388"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0292"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0978" sboTerm="SBO:0000176" id="r_0978" name="ribonucleotide reductase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YER070W OR YGR180C OR YJL026W OR YIL066C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description 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name="ribonucleotide reductase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YER070W OR YGR180C OR YJL026W OR YIL066C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0979"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02019"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0742" stoichiometry="1" constant="true"/> <speciesReference species="s_1618" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0614" stoichiometry="1" constant="true"/> <speciesReference species="s_0808" stoichiometry="1" constant="true"/> <speciesReference species="s_1622" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0468"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0493"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0388"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0292"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0982" sboTerm="SBO:0000176" id="r_0982" name="ribose-5-phosphate isomerase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YOR095C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0982"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/9763699"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0577" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1408" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0852"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0983" sboTerm="SBO:0000176" id="r_0983" name="ribosylnicotinamide kinase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YNL129W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0983"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02324"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/15137942"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_1218" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0394" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1224" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0784"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0984" sboTerm="SBO:0000176" id="r_0984" name="ribulose 5-phosphate 3-epimerase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YJL121C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0984"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01529"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/9032985"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0577" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0581" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0506"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0985" sboTerm="SBO:0000176" id="r_0985" name="S-adenosyl-L-methionine:3-hexaprenyl-4,5-dihydroxylate O-methyltransferase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YOR125C AND YOL096C AND YML110C AND YGL119W AND YGR255C AND YDR204W AND YLR201C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0985"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R04711"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/15792955"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0213" stoichiometry="1" constant="true"/> <speciesReference species="s_1419" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0214" stoichiometry="1" constant="true"/> <speciesReference species="s_0799" stoichiometry="1" constant="true"/> <speciesReference species="s_1415" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0858"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0835"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0713"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0339"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0406"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0191"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0660"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0986" sboTerm="SBO:0000176" id="r_0986" name="S-adenosyl-methionine delta-24-sterol-c-methyltransferase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YML008C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0986"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R04427"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_1416" stoichiometry="1" constant="true"/> <speciesReference species="s_1569" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0700" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1413" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0699"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0987" sboTerm="SBO:0000176" id="r_0987" name="S-formylglutathione hydralase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YJL068C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0987"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00527"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> <speciesReference species="s_1421" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0722" stoichiometry="1" constant="true"/> <speciesReference species="s_0750" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0497"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0988" sboTerm="SBO:0000176" id="r_0988" name="saccharopine dehydrogenase (NAD, L-lysine forming)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YIR034C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0988"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00715"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/3928261"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> <speciesReference species="s_1038" stoichiometry="1" constant="true"/> <speciesReference species="s_1198" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0180" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1025" stoichiometry="1" constant="true"/> <speciesReference species="s_1203" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0489"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0989" sboTerm="SBO:0000176" id="r_0989" name="saccharopine dehydrogenase (NADP, L-glutamate forming)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YNR050C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0989"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02315"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/3123231"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_0959" stoichiometry="1" constant="true"/> <speciesReference species="s_0991" stoichiometry="1" constant="true"/> <speciesReference species="s_1212" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> <speciesReference species="s_1038" stoichiometry="1" constant="true"/> <speciesReference species="s_1207" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0813"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0990" sboTerm="SBO:0000176" id="r_0990" name="sedoheptulose 1,7-bisphosphate D-glyceraldehyde-3-phosphate-lyase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YKL060C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0990"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01829"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_1426" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0551" stoichiometry="1" constant="true"/> <speciesReference species="s_0629" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0567"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0992" sboTerm="SBO:0000176" id="r_0992" name="serine O-acetyltransferase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0992"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00586"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/8335636"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0373" stoichiometry="1" constant="true"/> <speciesReference species="s_1039" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0529" stoichiometry="1" constant="true"/> <speciesReference species="s_1234" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="meta_r_0993" sboTerm="SBO:0000176" id="r_0993" name="serine palmitotransferase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:((YBR058C-A AND YDR062W AND YMR296C) OR (YDR062W AND YMR296C))</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0993"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01281"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/10713067"/> <rdf:li rdf:resource="http://identifiers.org/pubmed/18296751"/> <rdf:li rdf:resource="http://identifiers.org/pubmed/2066332"/> <rdf:li rdf:resource="http://identifiers.org/pubmed/8058731"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_1040" stoichiometry="1" constant="true"/> <speciesReference species="s_1303" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0231" stoichiometry="1" constant="true"/> <speciesReference species="s_0457" stoichiometry="1" constant="true"/> <speciesReference species="s_0530" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0054"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0177"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0761"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0995" sboTerm="SBO:0000176" id="r_0995" name="seryl-tRNA synthetase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YHR011W OR YDR023W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0995"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03662"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/3031581"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_1039" stoichiometry="1" constant="true"/> <speciesReference species="s_1607" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0423" stoichiometry="1" constant="true"/> <speciesReference species="s_0633" stoichiometry="1" constant="true"/> <speciesReference species="s_1428" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0168"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0425"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0996" sboTerm="SBO:0000176" id="r_0996" name="shikimate dehydrogenase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDR127W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0996"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02413"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/6355828"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0211" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1212" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1207" stoichiometry="1" constant="true"/> <speciesReference species="s_1429" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0182"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0997" sboTerm="SBO:0000176" id="r_0997" name="shikimate kinase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDR127W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0997"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02412"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/6355828"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_1429" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0261" stoichiometry="1" constant="true"/> <speciesReference species="s_0394" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0182"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0998" sboTerm="SBO:0000176" id="r_0998" name="sirohydrochlorin dehydrogenase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YBR213W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0998"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/11980703"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_1198" stoichiometry="1" constant="true"/> <speciesReference species="s_1375" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1203" stoichiometry="1" constant="true"/> <speciesReference species="s_1431" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0083"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_0999" sboTerm="SBO:0000176" id="r_0999" name="sirohydrochlorin ferrochetalase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YBR213W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_0999"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02864"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/11980703"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0924" stoichiometry="1" constant="true"/> <speciesReference species="s_1431" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0794" stoichiometry="3" constant="true"/> <speciesReference species="s_1430" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0083"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1001" sboTerm="SBO:0000176" id="r_1001" name="spermidine synthase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YPR069C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1001"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01920"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_1389" stoichiometry="1" constant="true"/> <speciesReference species="s_1420" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0303" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1439" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0961"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1002" sboTerm="SBO:0000176" id="r_1002" name="spermine synthase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YLR146C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1002"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02869"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_1420" stoichiometry="1" constant="true"/> <speciesReference species="s_1439" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0303" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1442" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0650"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1003" sboTerm="SBO:0000176" id="r_1003" name="sphinganine phosphate lyase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDR294C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1003"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02464"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/18296751"/> <rdf:li rdf:resource="http://identifiers.org/pubmed/9334171"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_1446" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0825" stoichiometry="1" constant="true"/> <speciesReference species="s_1240" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0205"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1004" sboTerm="SBO:0000176" id="r_1004" name="sphingoid base-phosphate phosphatase (phytosphingosine 1-phosphate)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YKR053C OR YJL134W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1004"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/18296751"/> <rdf:li rdf:resource="http://identifiers.org/pubmed/9353337"/> <rdf:li rdf:resource="http://identifiers.org/pubmed/9419344"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0804" stoichiometry="1" constant="true"/> <speciesReference species="s_1367" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1323" stoichiometry="1" constant="true"/> <speciesReference species="s_1366" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0509"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0602"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1005" sboTerm="SBO:0000176" id="r_1005" name="sphingoid base-phosphate phosphatase (sphinganine 1-phosphatase)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YKR053C OR YJL134W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1005"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R06520"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/18296751"/> <rdf:li rdf:resource="http://identifiers.org/pubmed/9353337"/> <rdf:li rdf:resource="http://identifiers.org/pubmed/9419344"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0804" stoichiometry="1" constant="true"/> <speciesReference species="s_1446" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1323" stoichiometry="1" constant="true"/> <speciesReference species="s_1445" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0509"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0602"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1006" sboTerm="SBO:0000176" id="r_1006" name="sphingolipid long chain base kinase (phytosphingosine)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YOR171C OR YLR260W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1006"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/18296751"/> <rdf:li rdf:resource="http://identifiers.org/pubmed/9677363"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0435" stoichiometry="1" constant="true"/> <speciesReference species="s_1366" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0395" stoichiometry="1" constant="true"/> <speciesReference species="s_0795" stoichiometry="1" constant="true"/> <speciesReference species="s_1367" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0668"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0868"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1007" sboTerm="SBO:0000176" id="r_1007" name="sphingolipid long chain base kinase (sphinganine)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YOR171C OR YLR260W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1007"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02976"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/18296751"/> <rdf:li rdf:resource="http://identifiers.org/pubmed/9677363"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0435" stoichiometry="1" constant="true"/> <speciesReference species="s_1445" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0395" stoichiometry="1" constant="true"/> <speciesReference species="s_0795" stoichiometry="1" constant="true"/> <speciesReference species="s_1446" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0668"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0868"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1008" sboTerm="SBO:0000176" id="r_1008" name="spontaneous cis-aconitate(3-) to trans-aconitate" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1008"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02244"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/11329290"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0517" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1504" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="meta_r_1009" sboTerm="SBO:0000176" id="r_1009" name="spontaneous cis-aconitate(3-) to trans-aconitate" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1009"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02244"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/11329290"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0516" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1503" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="meta_r_1010" sboTerm="SBO:0000176" id="r_1010" name="squalene epoxidase (NAD)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YGR175C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1010"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/10622712"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0795" stoichiometry="1" constant="true"/> <speciesReference species="s_1204" stoichiometry="1" constant="true"/> <speciesReference species="s_1276" stoichiometry="1" constant="true"/> <speciesReference species="s_1448" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0038" stoichiometry="1" constant="true"/> <speciesReference species="s_0804" stoichiometry="1" constant="true"/> <speciesReference species="s_1199" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0385"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1011" sboTerm="SBO:0000176" id="r_1011" name="squalene epoxidase (NADP)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YGR175C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1011"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02874"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/10622712"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0795" stoichiometry="1" constant="true"/> <speciesReference species="s_1213" stoichiometry="1" constant="true"/> <speciesReference species="s_1276" stoichiometry="1" constant="true"/> <speciesReference species="s_1448" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0038" stoichiometry="1" constant="true"/> <speciesReference species="s_0804" stoichiometry="1" constant="true"/> <speciesReference species="s_1208" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0385"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1012" sboTerm="SBO:0000176" id="r_1012" name="squalene synthase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YHR190W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1012"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R06223"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0190" stoichiometry="2" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1212" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0633" stoichiometry="2" constant="true"/> <speciesReference species="s_1207" stoichiometry="1" constant="true"/> <speciesReference species="s_1447" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0456"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1021" sboTerm="SBO:0000176" id="r_1021" name="succinate dehydrogenase (ubiquinone-6)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:((YKL141W AND YDR178W AND YLL041C AND YKL148C) OR (YKL141W AND YDR178W AND YJL045W AND YLL041C))</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1021"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/9929002"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_1460" stoichiometry="1" constant="true"/> <speciesReference species="s_1537" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0727" stoichiometry="1" constant="true"/> <speciesReference species="s_1535" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0579"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0188"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0494"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0619"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0581"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1022" sboTerm="SBO:0000176" id="r_1022" name="succinate-CoA ligase (ADP-forming)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YGR244C AND YOR142W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1022"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00405"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/9874242"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0397" stoichiometry="1" constant="true"/> <speciesReference species="s_1326" stoichiometry="1" constant="true"/> <speciesReference species="s_1464" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0437" stoichiometry="1" constant="true"/> <speciesReference species="s_0532" stoichiometry="1" constant="true"/> <speciesReference species="s_1460" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0402"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0863"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1023" sboTerm="SBO:0000176" id="r_1023" name="succinate-semialdehyde dehydrogenase (NADP)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YBR006W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1023"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00714"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/11031268"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> <speciesReference species="s_1207" stoichiometry="1" constant="true"/> <speciesReference species="s_1461" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0794" stoichiometry="2" constant="true"/> <speciesReference species="s_1212" stoichiometry="1" constant="true"/> <speciesReference species="s_1458" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0037"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1024" sboTerm="SBO:0000176" id="r_1024" name="sucrose hydrolyzing enxyme" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YIL162W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1024"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00801"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0805" stoichiometry="1" constant="true"/> <speciesReference species="s_1466" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0554" stoichiometry="1" constant="true"/> <speciesReference species="s_0565" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0482"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1025" sboTerm="SBO:0000176" id="r_1025" name="sulfate adenylyltransferase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YJR010W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1025"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00529"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/197388"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1467" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0298" stoichiometry="1" constant="true"/> <speciesReference species="s_0633" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0526"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1026" sboTerm="SBO:0000176" id="r_1026" name="sulfate adenylyltransferase (ADP)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YCL050C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1026"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00530"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/2556364"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0394" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1467" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0298" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0107"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000176" id="r_1027" name="sulfite reductase (NADPH2)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YJR137C AND YFR030W)</p> </body> </notes> <listOfReactants> <speciesReference species="s_0794" stoichiometry="5" constant="true"/> <speciesReference species="s_1212" stoichiometry="3" constant="true"/> <speciesReference species="s_1469" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0803" stoichiometry="3" constant="true"/> <speciesReference species="s_0841" stoichiometry="1" constant="true"/> <speciesReference species="s_1207" stoichiometry="3" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0547"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0321"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1028" sboTerm="SBO:0000185" id="r_1028" name="taurcholate via ABC system" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YLL048C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1028"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/9182565"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> <speciesReference species="s_1473" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0394" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1474" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0621"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1029" sboTerm="SBO:0000176" id="r_1029" name="taurine dioxygenase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YLL057C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1029"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/10482536"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0180" stoichiometry="1" constant="true"/> <speciesReference species="s_1275" stoichiometry="1" constant="true"/> <speciesReference species="s_1471" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0417" stoichiometry="1" constant="true"/> <speciesReference species="s_0456" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1458" stoichiometry="1" constant="true"/> <speciesReference species="s_1469" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0623"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000176" id="r_1030" name="tetrahydrofolate aminomethyltransferase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YAL044C AND YDR019C AND YFL018C AND YMR189W)</p> </body> </notes> <listOfReactants> <speciesReference species="s_0305" stoichiometry="1" constant="true"/> <speciesReference species="s_0807" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0321" stoichiometry="1" constant="true"/> <speciesReference species="s_0799" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0741"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0306"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0167"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0012"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1031" sboTerm="SBO:0000176" id="r_1031" name="tetrahydrofolate:L-glutamate gamma-ligase (ADP-forming)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YOR241W OR YKL132C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1031"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00942"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/10799479"/> <rdf:li rdf:resource="http://identifiers.org/pubmed/21190580"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_0991" stoichiometry="1" constant="true"/> <speciesReference species="s_1487" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0308" stoichiometry="1" constant="true"/> <speciesReference species="s_0394" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0577"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0882"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000176" id="r_1032" name="thiamin diphosphatase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YBR092C</p> </body> </notes> <listOfReactants> <speciesReference species="s_0805" stoichiometry="2" constant="true"/> <speciesReference species="s_1476" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0796" stoichiometry="1" constant="true"/> <speciesReference species="s_1324" stoichiometry="2" constant="true"/> <speciesReference species="s_1490" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0059"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1033" sboTerm="SBO:0000176" id="r_1033" name="thiamin phosphatase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YBR092C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1033"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02135"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0805" stoichiometry="1" constant="true"/> <speciesReference species="s_1498" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1324" stoichiometry="1" constant="true"/> <speciesReference species="s_1490" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0059"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1034" sboTerm="SBO:0000176" id="r_1034" name="thiamine diphosphokinase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YOR143C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1034"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00619"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_1489" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0423" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1475" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0864"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1035" sboTerm="SBO:0000176" id="r_1035" name="thiamine-diphosphate kinase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YOR143C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1035"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00616"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_1475" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0394" stoichiometry="1" constant="true"/> <speciesReference species="s_1532" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0864"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1036" sboTerm="SBO:0000176" id="r_1036" name="thiamine-phosphate diphosphorylase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YPL214C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1036"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03223"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0267" stoichiometry="1" constant="true"/> <speciesReference species="s_0293" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0633" stoichiometry="1" constant="true"/> <speciesReference species="s_1497" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0933"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1037" sboTerm="SBO:0000176" id="r_1037" name="thioredoxin" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:((YIL010W AND YGR209C) OR (YLR043C AND YIL010W))</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1037"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/12730197"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0839" stoichiometry="1" constant="true"/> <speciesReference species="s_1618" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0808" stoichiometry="2" constant="true"/> <speciesReference species="s_1622" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="s_1618"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0463"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0399"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1038" sboTerm="SBO:0000176" id="r_1038" name="thioredoxin reductase (NADPH)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YDR353W OR (YDR353W AND YGR209C) OR (YDR353W AND YLR043C))</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1038"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02016"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1212" stoichiometry="1" constant="true"/> <speciesReference species="s_1620" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1207" stoichiometry="1" constant="true"/> <speciesReference species="s_1616" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="s_1616"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0218"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0398"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1039" sboTerm="SBO:0000176" id="r_1039" name="thioredoxin reductase (NADPH)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:((YPL091W AND YCR083W) OR (YHR106W AND YCR083W))</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1039"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02016"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/15701801"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0799" stoichiometry="1" constant="true"/> <speciesReference species="s_1214" stoichiometry="1" constant="true"/> <speciesReference species="s_1621" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1210" stoichiometry="1" constant="true"/> <speciesReference species="s_1617" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0448"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0916"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0124"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1040" sboTerm="SBO:0000176" id="r_1040" name="threonine aldolase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YEL046C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1040"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00751"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/9151955"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_1045" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0359" stoichiometry="1" constant="true"/> <speciesReference species="s_1003" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0260"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1041" sboTerm="SBO:0000176" id="r_1041" name="threonine synthase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YCR053W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1041"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01466"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/8082795"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> <speciesReference species="s_1238" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1045" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0122"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1042" sboTerm="SBO:0000176" id="r_1042" name="threonyl-tRNA synthetase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YIL078W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1042"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03663"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/2995918"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_1045" stoichiometry="1" constant="true"/> <speciesReference species="s_1608" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0423" stoichiometry="1" constant="true"/> <speciesReference species="s_0633" stoichiometry="1" constant="true"/> <speciesReference species="s_1491" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0470"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1043" sboTerm="SBO:0000176" id="r_1043" name="threonyl-tRNA synthetase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YKL194C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1043"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03663"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/2999113"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0437" stoichiometry="1" constant="true"/> <speciesReference species="s_1047" stoichiometry="1" constant="true"/> <speciesReference species="s_1609" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0424" stoichiometry="1" constant="true"/> <speciesReference species="s_0636" stoichiometry="1" constant="true"/> <speciesReference species="s_1492" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0590"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1044" sboTerm="SBO:0000176" id="r_1044" name="thymidine phosphorylase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YLR209C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1044"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01570"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> <speciesReference species="s_1493" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0151" stoichiometry="1" constant="true"/> <speciesReference species="s_1495" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0661"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1045" sboTerm="SBO:0000176" id="r_1045" name="thymidylate synthase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YOR074C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1045"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02101"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0306" stoichiometry="1" constant="true"/> <speciesReference species="s_0654" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0625" stoichiometry="1" constant="true"/> <speciesReference species="s_0649" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0850"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1046" sboTerm="SBO:0000176" id="r_1046" name="trans-aconitate 3-methyltransferase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YER175C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1046"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R05763"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/15147181"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_1416" stoichiometry="1" constant="true"/> <speciesReference species="s_1503" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0007" stoichiometry="1" constant="true"/> <speciesReference species="s_1413" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0305"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1047" sboTerm="SBO:0000176" id="r_1047" name="trans-pentaprenyltranstransferase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YBR003W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1047"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R05613"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/2198286"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0945" stoichiometry="1" constant="true"/> <speciesReference species="s_1313" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0636" stoichiometry="1" constant="true"/> <speciesReference species="s_0831" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0035"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1048" sboTerm="SBO:0000176" id="r_1048" name="transaldolase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YLR354C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1048"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/8300619"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0764" stoichiometry="1" constant="true"/> <speciesReference species="s_1427" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0551" stoichiometry="1" constant="true"/> <speciesReference species="s_0557" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0684"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1049" sboTerm="SBO:0000176" id="r_1049" name="transketolase 1" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YPR074C OR YBR117C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1049"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/8268320"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0581" stoichiometry="1" constant="true"/> <speciesReference species="s_1408" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0764" stoichiometry="1" constant="true"/> <speciesReference species="s_1427" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0063"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0962"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000176" id="r_1050" name="transketolase 2" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YPR074C OR YBR117C)</p> </body> </notes> <listOfReactants> <speciesReference species="s_0551" stoichiometry="1" constant="true"/> <speciesReference species="s_0581" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0557" stoichiometry="1" constant="true"/> <speciesReference species="s_0764" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0063"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0962"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1051" sboTerm="SBO:0000176" id="r_1051" name="trehalose-phosphatase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:((YBR126C AND YDR074W AND YMR261C) OR (YML100W AND YBR126C AND YDR074W))</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1051"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02778"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/21623372"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0409" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> <speciesReference species="s_1520" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0711"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0065"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0179"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0753"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1054" sboTerm="SBO:0000176" id="r_1054" name="triose-phosphate isomerase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDR050C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1054"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/6759603"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference 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<speciesReference species="s_0180" stoichiometry="1" constant="true"/> <speciesReference species="s_1048" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0855" stoichiometry="1" constant="true"/> <speciesReference species="s_0991" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0348"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1057" sboTerm="SBO:0000176" id="r_1057" name="tryptophanyl-tRNA synthetase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YOL097C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1057"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03664"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/9046085"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_1048" stoichiometry="1" constant="true"/> <speciesReference species="s_1610" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0423" stoichiometry="1" constant="true"/> <speciesReference species="s_0633" stoichiometry="1" constant="true"/> <speciesReference species="s_1527" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0836"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1058" sboTerm="SBO:0000176" id="r_1058" name="tryptophanyl-tRNA synthetase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDR268W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1058"> <bqbiol:is> <rdf:Bag> <rdf:li 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<notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YGL202W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1063"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00734"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/9491082"/> <rdf:li rdf:resource="http://identifiers.org/pubmed/9491083"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0204" stoichiometry="1" constant="true"/> <speciesReference species="s_0991" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0180" stoichiometry="1" constant="true"/> <speciesReference species="s_1051" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0348"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1065" sboTerm="SBO:0000176" id="r_1065" name="tyrosine transaminase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YLR027C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1065"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00734"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0206" stoichiometry="1" constant="true"/> <speciesReference species="s_0995" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0184" stoichiometry="1" constant="true"/> <speciesReference species="s_1054" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0630"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1066" sboTerm="SBO:0000176" id="r_1066" name="tyrosyl-tRNA synthetase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YGR185C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1066"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02918"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/8509419"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_1051" stoichiometry="1" constant="true"/> <speciesReference species="s_1612" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0423" stoichiometry="1" constant="true"/> <speciesReference species="s_0633" stoichiometry="1" constant="true"/> <speciesReference species="s_1533" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0390"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1067" sboTerm="SBO:0000176" id="r_1067" name="tyrosyl-tRNA synthetase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YPL097W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1067"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02918"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/3315228"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0437" stoichiometry="1" constant="true"/> <speciesReference species="s_1053" stoichiometry="1" constant="true"/> <speciesReference species="s_1613" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0424" stoichiometry="1" constant="true"/> <speciesReference species="s_0636" stoichiometry="1" constant="true"/> <speciesReference species="s_1534" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0918"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1068" sboTerm="SBO:0000176" id="r_1068" name="UDP-glucose:ergosterol glucosyltransferase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YLR189C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1068"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/10224056"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0666" stoichiometry="1" constant="true"/> <speciesReference species="s_1543" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0670" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1538" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0659"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1069" sboTerm="SBO:0000176" id="r_1069" name="UDP-N-acetylglucosamine diphosphorylase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDL103C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1069"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00416"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/16408321"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1189" stoichiometry="1" constant="true"/> <speciesReference species="s_1559" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0633" stoichiometry="1" constant="true"/> <speciesReference species="s_1544" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0144"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000176" id="r_1070" name="UDPglucose 4-epimerase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YBR019C</p> </body> </notes> <listOfReactants> <speciesReference species="s_1543" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1541" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0040"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1071" sboTerm="SBO:0000176" id="r_1071" name="UDPglucose--hexose-1-phosphate uridylyltransferase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YBR018C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1071"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00955"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0410" stoichiometry="1" constant="true"/> <speciesReference species="s_1543" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0567" stoichiometry="1" constant="true"/> <speciesReference species="s_1541" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0039"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1072" sboTerm="SBO:0000176" id="r_1072" name="UMP kinase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YKL024C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1072"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00158"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_1545" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0394" stoichiometry="1" constant="true"/> <speciesReference species="s_1538" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0561"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1073" sboTerm="SBO:0000176" id="r_1073" name="UMP kinase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YKL024C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1073"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00158"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0438" stoichiometry="1" constant="true"/> <speciesReference species="s_1548" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0398" stoichiometry="1" constant="true"/> <speciesReference species="s_1540" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0562"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1074" sboTerm="SBO:0000176" id="r_1074" name="uracil phosphoribosyltransferase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YHR128W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1074"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00966"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_1386" stoichiometry="1" constant="true"/> <speciesReference species="s_1550" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0633" stoichiometry="1" constant="true"/> <speciesReference species="s_1545" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0450"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1075" sboTerm="SBO:0000176" id="r_1075" name="urea carboxylase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YBR208C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1075"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00774"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_0445" stoichiometry="1" constant="true"/> <speciesReference species="s_1552" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0394" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> <speciesReference species="s_1554" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0082"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1076" sboTerm="SBO:0000176" id="r_1076" name="ureidoglycolate hydrolase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YIR032C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1076"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/1776360"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0794" stoichiometry="2" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> <speciesReference species="s_1555" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0419" stoichiometry="2" constant="true"/> <speciesReference species="s_0456" stoichiometry="1" constant="true"/> <speciesReference species="s_0779" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0488"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1077" sboTerm="SBO:0000176" id="r_1077" name="uridine kinase (ATP:uridine)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YNR012W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1077"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00964"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_1556" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0394" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1545" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0806"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1078" sboTerm="SBO:0000176" id="r_1078" name="uridine kinase (GTP:uridine)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YNR012W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1078"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00968"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0785" stoichiometry="1" constant="true"/> <speciesReference species="s_1556" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0739" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1545" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0806"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1079" sboTerm="SBO:0000176" id="r_1079" name="uridylate kinase (dUMP)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YKL024C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1079"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02098"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_0654" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0394" stoichiometry="1" constant="true"/> <speciesReference species="s_0652" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0561"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1080" sboTerm="SBO:0000176" id="r_1080" name="uridylate kinase (dUMP)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YKL024C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1080"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02098"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0438" stoichiometry="1" constant="true"/> <speciesReference species="s_0655" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0398" stoichiometry="1" constant="true"/> <speciesReference species="s_0653" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0562"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1081" sboTerm="SBO:0000176" id="r_1081" name="uroporphyrinogen decarboxylase (uroporphyrinogen III)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDR047W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1081"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03197"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0794" stoichiometry="4" constant="true"/> <speciesReference species="s_1558" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0456" stoichiometry="4" constant="true"/> <speciesReference species="s_0538" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0174"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1082" sboTerm="SBO:0000176" id="r_1082" name="uroporphyrinogen methyltransferase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YKR069W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1082"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03194"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_1416" stoichiometry="2" constant="true"/> <speciesReference species="s_1558" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1375" stoichiometry="1" constant="true"/> <speciesReference species="s_1413" stoichiometry="2" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0608"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1083" sboTerm="SBO:0000176" id="r_1083" name="uroporphyrinogen-III synthase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YOR278W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1083"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03165"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_1378" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> <speciesReference species="s_1558" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0887"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1084" sboTerm="SBO:0000176" id="r_1084" name="UTP-glucose-1-phosphate uridylyltransferase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YKL035W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1084"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00289"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/7588797"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0567" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1559" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0633" stoichiometry="1" constant="true"/> <speciesReference species="s_1543" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0565"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1085" sboTerm="SBO:0000185" id="r_1085" name="V-ATPase, Golgi" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YBR127C AND YDL185W AND YEL027W AND YEL051W AND YGR020C AND YHR026W AND YHR039C-A AND YKL080W AND YLR447C AND YMR054W AND YOR332W AND YPL234C AND YPR036W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1085"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/11278748"/> <rdf:li rdf:resource="http://identifiers.org/pubmed/11836511"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0394" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> <speciesReference species="s_0797" stoichiometry="2" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0727"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0569"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0432"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0263"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0956"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0155"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0892"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0362"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0251"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0695"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0935"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0066"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0429"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1086" sboTerm="SBO:0000185" id="r_1086" name="V-ATPase, vacuole" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YBR127C AND YDL185W AND YEL027W AND YEL051W AND YGR020C AND YHR026W AND YHR039C-A AND YKL080W AND YLR447C AND YOR270C AND YOR332W AND YPL234C AND YPR036W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1086"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/11278748"/> <rdf:li rdf:resource="http://identifiers.org/pubmed/11836511"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0394" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> <speciesReference species="s_0802" stoichiometry="2" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0570"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0433"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0264"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0957"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0156"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0893"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0363"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0252"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0696"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0884"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0936"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0067"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0430"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1087" sboTerm="SBO:0000176" id="r_1087" name="valine transaminase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YJR148W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1087"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01214"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/9748245"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0180" stoichiometry="1" constant="true"/> <speciesReference species="s_1056" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0232" stoichiometry="1" constant="true"/> <speciesReference species="s_0991" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0550"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1088" sboTerm="SBO:0000176" id="r_1088" name="valine transaminase, mitochondiral" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YHR208W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1088"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01214"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/9748245"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0182" stoichiometry="1" constant="true"/> <speciesReference species="s_1058" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0233" stoichiometry="1" constant="true"/> <speciesReference species="s_0993" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0457"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1089" sboTerm="SBO:0000176" id="r_1089" name="valyl-tRNA synthetase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YGR094W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1089"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03665"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/3294828"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_1056" stoichiometry="1" constant="true"/> <speciesReference species="s_1614" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0423" stoichiometry="1" constant="true"/> <speciesReference species="s_0633" stoichiometry="1" constant="true"/> <speciesReference species="s_1561" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0372"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1090" sboTerm="SBO:0000176" id="r_1090" name="valyl-tRNA synthetase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YGR094W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1090"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R03665"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/3294828"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0437" stoichiometry="1" constant="true"/> <speciesReference species="s_1058" stoichiometry="1" constant="true"/> <speciesReference species="s_1615" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0424" stoichiometry="1" constant="true"/> <speciesReference species="s_0636" stoichiometry="1" constant="true"/> <speciesReference species="s_1562" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0373"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1091" sboTerm="SBO:0000176" id="r_1091" name="xanthine phosphoribosyltransferase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YJR133W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1091"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R02142"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0357" stoichiometry="1" constant="true"/> <speciesReference species="s_1386" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0633" stoichiometry="1" constant="true"/> <speciesReference species="s_1565" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0546"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1092" sboTerm="SBO:0000176" id="r_1092" name="xylitol dehydrogenase (D-xyulose-forming)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YLR070C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1092"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01896"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_1198" stoichiometry="1" constant="true"/> <speciesReference species="s_1566" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0580" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1203" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0640"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1093" sboTerm="SBO:0000176" id="r_1093" name="xylose reductase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YHR104W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1093"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01431"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0578" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1212" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1207" stoichiometry="1" constant="true"/> <speciesReference species="s_1566" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0447"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1094" sboTerm="SBO:0000176" id="r_1094" name="xylulokinase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YGR194C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1094"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01639"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_0580" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0394" stoichiometry="1" constant="true"/> <speciesReference species="s_0581" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0394"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000176" id="r_1095" name="yUMP synthetase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YNL292W OR YPL212C OR YGL063W OR YFL001W)</p> </body> </notes> <listOfReactants> <speciesReference species="s_1408" stoichiometry="1" constant="true"/> <speciesReference species="s_1550" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> <speciesReference species="s_1388" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0308"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0335"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0932"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0801"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1096" sboTerm="SBO:0000185" id="r_1096" name="(R)-mevalonate transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1096"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/15215118"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0029" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0028" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="meta_r_1097" sboTerm="SBO:0000185" id="r_1097" name="(R,R)-butanediol transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1097"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/10938079"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0035" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0036" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="meta_r_1098" sboTerm="SBO:0000185" id="r_1098" name="2-methylbutyl transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1098"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/10653746"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0172" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0173" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="meta_r_1099" sboTerm="SBO:0000185" id="r_1099" name="2-oxoadipate and 2-oxoglutarate transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YOR222W OR YPL134C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1099"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/16844075"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0066" stoichiometry="1" constant="true"/> <speciesReference species="s_0177" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0068" stoichiometry="1" constant="true"/> <speciesReference species="s_0176" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0923"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0879"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1100" sboTerm="SBO:0000185" id="r_1100" name="3-hexaprenyl-4,5-dihydroxybenzoate transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1100"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/11583838"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0212" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0213" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction sboTerm="SBO:0000185" id="r_1101" name="4-aminobutyrate transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YOR348C OR YDL210W)</p> </body> </notes> <listOfReactants> <speciesReference species="s_0736" stoichiometry="1" constant="true"/> <speciesReference species="s_0796" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0734" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0159"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0896"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000185" id="r_1102" name="5-aminolevulinate transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDL210W</p> </body> </notes> <listOfReactants> <speciesReference species="s_0316" stoichiometry="1" constant="true"/> <speciesReference species="s_0796" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0315" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0159"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1103" sboTerm="SBO:0000185" id="r_1103" name="5-formyltetrahydrofolic acid transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1103"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/8573145"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0320" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0319" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="meta_r_1104" sboTerm="SBO:0000185" id="r_1104" name="8-Amino-7-oxononanoate transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YNR056C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1104"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/10333520"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0354" stoichiometry="1" constant="true"/> <speciesReference species="s_0796" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0352" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0814"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1106" sboTerm="SBO:0000185" id="r_1106" name="acetate transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YCR010C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1106"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/14968426"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0362" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0364" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0112"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1107" sboTerm="SBO:0000185" id="r_1107" name="acetic ester transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1107"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/10653746"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0685" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0686" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction sboTerm="SBO:0000185" id="r_1108" name="adenine transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YER056C OR YER060W OR YER060W-A OR YGL186C)</p> </body> </notes> <listOfReactants> <speciesReference species="s_0384" stoichiometry="1" constant="true"/> <speciesReference species="s_0796" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0383" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0345"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0286"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0285"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0284"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1109" sboTerm="SBO:0000185" id="r_1109" name="adenosine transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YAL022C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1109"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/10827169"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0387" stoichiometry="1" constant="true"/> <speciesReference species="s_0796" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0386" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0009"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1110" sboTerm="SBO:0000185" id="r_1110" name="ADP/ATP transporter" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YMR056C OR YBR085W OR YBL030C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1110"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22672422"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0394" stoichiometry="1" constant="true"/> <speciesReference species="s_0437" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0397" stoichiometry="1" constant="true"/> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_0799" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0024"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0058"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0728"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000185" id="r_1111" name="ADP/ATP transporter" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YPR128C</p> </body> </notes> <listOfReactants> <speciesReference species="s_0399" stoichiometry="1" constant="true"/> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_0801" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0394" stoichiometry="1" constant="true"/> <speciesReference species="s_0439" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0967"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1112" sboTerm="SBO:0000185" id="r_1112" name="AKG transporter, mitochonrial" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YMR241W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1112"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/20371607"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0180" stoichiometry="1" constant="true"/> <speciesReference species="s_0524" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0182" stoichiometry="1" constant="true"/> <speciesReference species="s_0522" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0749"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000185" id="r_1113" name="allantoate uniport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YJR152W</p> </body> </notes> <listOfReactants> <speciesReference species="s_0406" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0405" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0551"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000185" id="r_1114" name="allantoin uniport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YIR028W</p> </body> </notes> <listOfReactants> <speciesReference species="s_0408" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0407" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0485"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1115" sboTerm="SBO:0000185" id="r_1115" name="ammonia transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YPR138C OR YNL142W OR YGR121C OR YDR384C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1115"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/12966084"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0420" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0419" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0787"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0375"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0225"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0968"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000185" id="r_1116" name="AMP/ATP transporter" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YPR128C</p> </body> </notes> <listOfReactants> <speciesReference species="s_0426" stoichiometry="1" constant="true"/> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_0801" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0423" stoichiometry="1" constant="true"/> <speciesReference species="s_0439" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0967"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1117" sboTerm="SBO:0000185" id="r_1117" name="aspartate transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YPR021C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1117"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/14622413"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_0973" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0799" stoichiometry="1" constant="true"/> <speciesReference species="s_0975" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0951"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1118" sboTerm="SBO:0000185" id="r_1118" name="aspartate-glutamate transporter" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YPR021C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1118"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/14622413"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0975" stoichiometry="1" constant="true"/> <speciesReference species="s_0991" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0973" stoichiometry="1" constant="true"/> <speciesReference species="s_0993" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0951"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000185" id="r_1119" name="biotin uptake" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YGR065C</p> </body> </notes> <listOfReactants> <speciesReference species="s_0452" stoichiometry="1" constant="true"/> <speciesReference species="s_0796" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0451" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0369"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000185" id="r_1120" name="carnithine-acetylcarnithine carrier" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YOR100C</p> </body> </notes> <listOfReactants> <speciesReference species="s_0023" stoichiometry="1" constant="true"/> <speciesReference species="s_1235" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0021" stoichiometry="1" constant="true"/> <speciesReference species="s_1236" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0854"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1121" sboTerm="SBO:0000185" id="r_1121" name="ceramide-2' (sphinganine:n-C24:0OH) transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1121"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/12484746"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0487" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0488" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="meta_r_1122" sboTerm="SBO:0000185" id="r_1122" name="ceramide-2' (sphinganine:n-C26:0OH) transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1122"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/12484746"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0490" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0491" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="meta_r_1123" sboTerm="SBO:0000185" id="r_1123" name="ceramide-3 (Phytosphingosine:n-C24:0OH) transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1123"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/12484746"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0493" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0494" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="meta_r_1124" sboTerm="SBO:0000185" id="r_1124" name="ceramide-3 (Phytosphingosine:n-C26:0OH) transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1124"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/12484746"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0496" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0497" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction sboTerm="SBO:0000185" id="r_1125" name="choline transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YGL077C</p> </body> </notes> <listOfReactants> <speciesReference species="s_0513" stoichiometry="1" constant="true"/> <speciesReference species="s_0796" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0512" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0337"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000185" id="r_1126" name="citrate transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YBR291C</p> </body> </notes> <listOfReactants> <speciesReference species="s_0068" stoichiometry="1" constant="true"/> <speciesReference species="s_0522" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0066" stoichiometry="1" constant="true"/> <speciesReference species="s_0524" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0093"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000185" id="r_1127" name="citrate transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YBR291C</p> </body> </notes> <listOfReactants> <speciesReference species="s_0522" stoichiometry="1" constant="true"/> <speciesReference species="s_1361" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0524" stoichiometry="1" constant="true"/> <speciesReference species="s_1360" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0093"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000185" id="r_1128" name="citrate transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YBR291C</p> </body> </notes> <listOfReactants> <speciesReference species="s_0522" stoichiometry="1" constant="true"/> <speciesReference species="s_0941" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0524" stoichiometry="1" constant="true"/> <speciesReference species="s_0940" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0093"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1129" sboTerm="SBO:0000185" id="r_1129" name="coenzyme A transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YHR002W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1129"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/11158296"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0529" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0532" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0423"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1130" sboTerm="SBO:0000185" id="r_1130" name="CTP transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YBR192W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1130"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/16844075"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0528" stoichiometry="1" constant="true"/> <speciesReference species="s_0539" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0526" stoichiometry="1" constant="true"/> <speciesReference species="s_0541" stoichiometry="1" constant="true"/> <speciesReference species="s_0799" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0078"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1131" sboTerm="SBO:0000185" id="r_1131" name="CTP/CMP antiport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YBR192W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1131"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/16194150"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0528" stoichiometry="1" constant="true"/> <speciesReference species="s_0539" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="2" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0526" stoichiometry="1" constant="true"/> <speciesReference species="s_0541" stoichiometry="1" constant="true"/> <speciesReference species="s_0799" stoichiometry="2" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0078"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1132" sboTerm="SBO:0000185" id="r_1132" name="cytidine transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YAL022C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1132"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/10827170"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0544" stoichiometry="1" constant="true"/> <speciesReference species="s_0796" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0543" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0009"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000185" id="r_1133" name="cytosine transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YER056C OR YER060W OR YER060W-A OR YGL186C)</p> </body> </notes> <listOfReactants> <speciesReference species="s_0546" stoichiometry="1" constant="true"/> <speciesReference species="s_0796" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0545" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0345"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0286"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0285"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0284"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000185" id="r_1134" name="D-fructose transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YDL245C OR YDR342C OR YDR343C OR YDR345C OR YEL069C OR YFL011W OR YHR092C OR YHR094C OR YHR096C OR YJL214W OR YJL219W OR YJR158W OR YMR011W OR YNR072W OR YOL156W)</p> </body> </notes> <listOfReactants> <speciesReference species="s_0554" stoichiometry="1" constant="true"/> <speciesReference species="s_0796" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0553" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0520"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0162"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0722"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0522"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0818"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0445"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0446"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0444"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0843"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0553"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0309"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0217"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0267"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0215"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0216"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000185" id="r_1135" name="D-galactose transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YFL011W OR YOL156W OR YDR536W OR YLR081W OR YNL318C OR YJL219W)</p> </body> </notes> <listOfReactants> <speciesReference species="s_0559" stoichiometry="1" constant="true"/> <speciesReference species="s_0796" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0558" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0522"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0803"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0641"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0246"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0843"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0309"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000185" id="r_1136" name="D-lactate transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YKL217W</p> </body> </notes> <listOfReactants> <speciesReference species="s_0026" stoichiometry="1" constant="true"/> <speciesReference species="s_0796" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0025" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0596"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1137" sboTerm="SBO:0000185" id="r_1137" name="D-lactate transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1137"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/14871487"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0025" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0027" stoichiometry="1" constant="true"/> <speciesReference species="s_0799" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="meta_r_1138" sboTerm="SBO:0000185" id="r_1138" name="D-lactate/pyruvate antiport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1138"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/14871487"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0025" stoichiometry="1" constant="true"/> <speciesReference species="s_1401" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0027" stoichiometry="1" constant="true"/> <speciesReference species="s_1399" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction sboTerm="SBO:0000185" id="r_1139" name="D-mannose transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YDL245C OR YDR342C OR YDR343C OR YDR345C OR YEL069C OR YFL011W OR YHR092C OR YHR094C OR YHR096C OR YJL214W OR YJL219W OR YJR158W OR YMR011W OR YNR072W OR YOL156W)</p> </body> </notes> <listOfReactants> <speciesReference species="s_0572" stoichiometry="1" constant="true"/> <speciesReference species="s_0796" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0571" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0520"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0162"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0722"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0522"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0818"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0445"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0446"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0444"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0843"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0553"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0309"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0217"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0267"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0215"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0216"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1146" sboTerm="SBO:0000185" id="r_1146" name="episterol transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YOR011W OR YIL013C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1146"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/12077145"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0659" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0657" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0464"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0844"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1147" sboTerm="SBO:0000185" id="r_1147" name="ergosterol transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YOR011W OR YIL013C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1147"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/12077145"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0668" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0666" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0464"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0844"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1148" sboTerm="SBO:0000185" id="r_1148" name="ergosterol transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YOR011W OR YIL013C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1148"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/17434796"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0665" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0666" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0464"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0844"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1149" sboTerm="SBO:0000185" id="r_1149" name="ethanolamine transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1149"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/15201274"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0684" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0683" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="meta_r_1151" sboTerm="SBO:0000185" id="r_1151" name="fadH2 transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YIL134W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1151"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/8631763"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0690" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0689" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0478"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1161" sboTerm="SBO:0000185" id="r_1161" name="fecosterol transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YOR011W OR YIL013C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1161"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/12077145"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0702" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0700" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0464"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0844"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1162" sboTerm="SBO:0000185" id="r_1162" name="fecosterol transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YOR011W OR YIL013C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1162"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/17434796"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0699" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0700" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0464"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0844"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1164" sboTerm="SBO:0000185" id="r_1164" name="folic acid transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1164"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/15215118"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0720" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0719" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="meta_r_1165" sboTerm="SBO:0000185" id="r_1165" name="GDP-mannose antiport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YGL225W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1165"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/9395539"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0743" stoichiometry="1" constant="true"/> <speciesReference species="s_0783" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0744" stoichiometry="1" constant="true"/> <speciesReference species="s_0782" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0351"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1166" sboTerm="SBO:0000185" id="r_1166" name="glucose transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YDL245C OR YDR342C OR YDR343C OR YDR345C OR YDR536W OR YEL069C OR YFL011W OR YHR092C OR YHR094C OR YHR096C OR YJL214W OR YJL219W OR YJR158W OR YLR081W OR YMR011W OR YNR072W OR YOL156W OR YDL247W OR YJR160C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1166"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/10618490"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0565" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0563" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0520"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0246"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0162"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0722"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0522"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0818"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0445"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0446"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0444"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0843"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0553"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0309"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0163"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0217"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0555"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0267"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0215"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0641"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0216"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1167" sboTerm="SBO:0000185" id="r_1167" name="glutathione transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YJL212C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1167"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/10788431"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0751" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0750" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0519"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1168" sboTerm="SBO:0000185" id="r_1168" name="glutathione transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YLL015W OR YDR135C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1168"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/10790694"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0750" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0753" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0183"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0614"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1169" sboTerm="SBO:0000185" id="r_1169" name="glycero-3-phospho-1-inositol transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YCR098C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1169"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/15145930"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0080" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0079" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0125"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1170" sboTerm="SBO:0000185" id="r_1170" name="glycero-3-phosphocholine transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YCR098C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1170"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/15145930"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_1435" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1433" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0125"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1171" sboTerm="SBO:0000185" id="r_1171" name="glycerol transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YPL189W OR YDR536W OR YGL084C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1171"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/15703210"/> <rdf:li rdf:resource="http://identifiers.org/pubmed/21623372"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0766" stoichiometry="1" constant="true"/> <speciesReference species="s_0796" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0765" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0338"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0929"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0246"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000185" id="r_1172" name="glycerol transport via channel" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YLL043W</p> </body> </notes> <listOfReactants> <speciesReference species="s_0765" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0766" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0620"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1173" sboTerm="SBO:0000185" id="r_1173" name="glycine transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YKR039W OR YPL265W OR YOR348C OR YOL020W OR YCL025C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1173"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/9573211"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0796" stoichiometry="1" constant="true"/> <speciesReference species="s_1004" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1003" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0102"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0942"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0896"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0821"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0600"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1174" sboTerm="SBO:0000185" id="r_1174" name="glycogen vacuolar 'transport' via autophagy" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1174"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/11486014"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0773" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0774" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="meta_r_1175" sboTerm="SBO:0000185" id="r_1175" name="GTP/GDP translocase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDL198C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1175"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/14998997"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0741" stoichiometry="1" constant="true"/> <speciesReference species="s_0785" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0739" stoichiometry="1" constant="true"/> <speciesReference species="s_0786" stoichiometry="1" constant="true"/> <speciesReference species="s_0799" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0157"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000185" id="r_1176" name="guanine transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YER056C OR YER060W OR YER060W-A OR YGL186C)</p> </body> </notes> <listOfReactants> <speciesReference species="s_0788" stoichiometry="1" constant="true"/> <speciesReference species="s_0796" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0787" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0345"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0286"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0285"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0284"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000185" id="r_1177" name="inositol transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YDR497C OR YOL103W)</p> </body> </notes> <listOfReactants> <speciesReference species="s_0796" stoichiometry="1" constant="true"/> <speciesReference species="s_1154" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1153" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0837"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0238"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1178" sboTerm="SBO:0000185" id="r_1178" name="iron (II) transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YMR319C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1178"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/9115232"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0925" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0924" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0767"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1179" sboTerm="SBO:0000185" id="r_1179" name="iron (II) transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1179"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/9660806"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0924" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0926" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="meta_r_1180" sboTerm="SBO:0000185" id="r_1180" name="isoamyl acetate transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1180"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/10653746"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0927" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0928" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="meta_r_1181" sboTerm="SBO:0000185" id="r_1181" name="isobutyl acetate transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1181"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/10653746"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0935" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0936" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="meta_r_1182" sboTerm="SBO:0000185" id="r_1182" name="isopentenyl diphosphate transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1182"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/11583838"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0943" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0945" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="meta_r_1183" sboTerm="SBO:0000185" id="r_1183" name="L-alanine transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YKR039W OR YOR348C OR YBR068C OR YOL020W OR YPL265W OR YDR046C OR YCL025C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1183"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/7495881"/> <rdf:li rdf:resource="http://identifiers.org/pubmed/9489675"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0796" stoichiometry="1" constant="true"/> <speciesReference species="s_0956" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_0955" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0102"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0173"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0942"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0821"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0055"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0896"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0600"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000185" id="r_1184" name="L-arganine transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YKR039W OR YEL063C OR YNL270C)</p> </body> </notes> <listOfReactants> <speciesReference species="s_0796" stoichiometry="1" constant="true"/> <speciesReference species="s_0966" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_0965" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0798"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0266"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0600"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1185" sboTerm="SBO:0000185" id="r_1185" name="L-arganine transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YBR293W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1185"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/15572352"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0802" stoichiometry="1" constant="true"/> <speciesReference species="s_0965" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_0968" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0094"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1186" sboTerm="SBO:0000185" id="r_1186" name="L-asparagine transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YKR039W OR YDR508C OR YPL265W OR YCL025C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1186"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/8660458"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0796" stoichiometry="1" constant="true"/> <speciesReference species="s_0970" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_0969" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0102"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0942"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0241"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0600"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1187" sboTerm="SBO:0000185" id="r_1187" name="L-asparagine transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YJR001W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1187"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/11274162"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0802" stoichiometry="1" constant="true"/> <speciesReference species="s_0969" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_0972" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0524"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1188" sboTerm="SBO:0000185" id="r_1188" name="L-aspartate transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YKL146W OR YNL101W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1188"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/11274162"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0802" stoichiometry="1" constant="true"/> <speciesReference species="s_0972" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_0969" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0777"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0580"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1189" sboTerm="SBO:0000185" id="r_1189" name="L-aspartate transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YER119C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1189"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/11274162"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0802" stoichiometry="1" constant="true"/> <speciesReference species="s_0977" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_0973" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0300"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000185" id="r_1190" name="L-aspartate transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YKR039W OR YFL055W OR YPL265W)</p> </body> </notes> <listOfReactants> <speciesReference species="s_0796" stoichiometry="1" constant="true"/> <speciesReference species="s_0974" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_0973" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0942"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0316"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0600"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000185" id="r_1191" name="L-carnitine transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YBR132C</p> </body> </notes> <listOfReactants> <speciesReference species="s_0022" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0021" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0068"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1192" sboTerm="SBO:0000185" id="r_1192" name="L-cystine transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YKR039W OR YBR068C OR YOL020W OR YBR069C OR YDR046C OR YDR508C OR YCL025C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1192"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/9573211"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0796" stoichiometry="1" constant="true"/> <speciesReference species="s_0982" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_0981" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0102"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0241"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0173"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0056"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0821"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0055"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0600"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1193" sboTerm="SBO:0000185" id="r_1193" name="L-cystine transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YCR075C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1193"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/11689434"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0802" stoichiometry="1" constant="true"/> <speciesReference species="s_0985" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_0984" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0123"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1194" sboTerm="SBO:0000185" id="r_1194" name="L-glutamate transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YPR021C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1194"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/14622413"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0991" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0993" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0951"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1195" sboTerm="SBO:0000185" id="r_1195" name="L-glutamate transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YER119C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1195"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/11274162"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0802" stoichiometry="1" constant="true"/> <speciesReference species="s_0996" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_0991" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0300"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000185" id="r_1196" name="L-glutamate transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YKR039W OR YFL055W OR YPL265W OR YCL025C)</p> </body> </notes> <listOfReactants> <speciesReference species="s_0796" stoichiometry="1" constant="true"/> <speciesReference species="s_0992" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_0991" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0102"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0942"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0316"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0600"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1197" sboTerm="SBO:0000185" id="r_1197" name="L-glutamine transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YJR001W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1197"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/11274162"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0802" stoichiometry="1" constant="true"/> <speciesReference species="s_0999" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1002" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0524"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1198" sboTerm="SBO:0000185" id="r_1198" name="L-glutamine transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YKL146W OR YNL101W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1198"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/11274162"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0802" stoichiometry="1" constant="true"/> <speciesReference species="s_1002" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_0999" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0777"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0580"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000185" id="r_1199" name="L-glutamine transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YKR039W OR YDR508C OR YPL265W OR YCL025C)</p> </body> </notes> <listOfReactants> <speciesReference species="s_0796" stoichiometry="1" constant="true"/> <speciesReference species="s_1000" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_0999" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0102"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0942"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0241"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0600"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1200" sboTerm="SBO:0000185" id="r_1200" name="L-histidine transport, vacuolar" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YBR293W OR YCL069W OR YMR088C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1200"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/15572352"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0802" stoichiometry="1" constant="true"/> <speciesReference species="s_1006" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1009" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0731"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0110"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0094"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000185" id="r_1201" name="L-histidine transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YKR039W OR YGR191W OR YBR069C)</p> </body> </notes> <listOfReactants> <speciesReference species="s_0796" stoichiometry="1" constant="true"/> <speciesReference species="s_1007" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1006" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0056"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0391"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0600"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1202" sboTerm="SBO:0000185" id="r_1202" name="L-isoleucine transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YCL038C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1202"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/17021250"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_1019" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1016" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0105"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1203" sboTerm="SBO:0000185" id="r_1203" name="L-isoleucine transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YJR001W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1203"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/11274162"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0802" stoichiometry="1" constant="true"/> <speciesReference species="s_1016" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1019" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0524"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1204" sboTerm="SBO:0000185" id="r_1204" name="L-isoleucine transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YKL146W OR YNL101W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1204"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/11274162"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0802" stoichiometry="1" constant="true"/> <speciesReference species="s_1019" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1016" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0777"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0580"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000185" id="r_1205" name="L-isoleucine transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YDR046C OR YKR039W OR YBR068C OR YCL025C OR YBR069C)</p> </body> </notes> <listOfReactants> <speciesReference species="s_0796" stoichiometry="1" constant="true"/> <speciesReference species="s_1017" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1016" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0056"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0102"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0055"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0600"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0173"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1206" sboTerm="SBO:0000185" id="r_1206" name="L-lactate transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YKL217W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1206"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/17761666"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0063" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0065" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0597"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1207" sboTerm="SBO:0000185" id="r_1207" name="L-lactate transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YKL217W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1207"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/10198029"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0064" stoichiometry="1" constant="true"/> <speciesReference species="s_0796" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0063" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0596"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1208" sboTerm="SBO:0000185" id="r_1208" name="L-leucine transport, vacuoluar" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YCL038C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1208"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/17021250"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_1024" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1021" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0105"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1209" sboTerm="SBO:0000185" id="r_1209" name="L-leucine transport, vacuoluar" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YJR001W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1209"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/11274162"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0802" stoichiometry="1" constant="true"/> <speciesReference species="s_1021" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1024" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0524"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1210" sboTerm="SBO:0000185" id="r_1210" name="L-leucine transport, vacuoluar" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YKL146W OR YNL101W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1210"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/11274162"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0802" stoichiometry="1" constant="true"/> <speciesReference species="s_1024" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1021" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0777"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0580"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000185" id="r_1211" name="L-leucine transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YKR039W OR YBR068C OR YBR069C OR YDR046C OR YDR508C OR YCL025C)</p> </body> </notes> <listOfReactants> <speciesReference species="s_0796" stoichiometry="1" constant="true"/> <speciesReference species="s_1022" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1021" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0102"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0241"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0173"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0056"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0055"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0600"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1212" sboTerm="SBO:0000185" id="r_1212" name="L-lysine transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YBR293W OR YCL069W OR YMR088C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1212"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/15572352"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0802" stoichiometry="1" constant="true"/> <speciesReference species="s_1025" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1028" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0731"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0110"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0094"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000185" id="r_1213" name="L-lysine transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YNL268W OR YKR039W)</p> </body> </notes> <listOfReactants> <speciesReference species="s_0796" stoichiometry="1" constant="true"/> <speciesReference species="s_1026" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1025" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0600"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0797"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000185" id="r_1214" name="L-methionine transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YKR039W OR YDR508C OR YHL036W OR YBR068C OR YDR046C OR YGR055W OR YCL025C)</p> </body> </notes> <listOfReactants> <speciesReference species="s_0796" stoichiometry="1" constant="true"/> <speciesReference species="s_1030" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1029" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0102"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0366"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0173"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0055"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0421"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0241"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0600"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000185" id="r_1215" name="L-phenylalanine transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YDR046C OR YKR039W OR YBR068C OR YOL020W OR YCL025C)</p> </body> </notes> <listOfReactants> <speciesReference species="s_0796" stoichiometry="1" constant="true"/> <speciesReference species="s_1033" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1032" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0102"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0821"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0055"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0600"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0173"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000185" id="r_1216" name="L-proline transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YKR039W OR YOR348C)</p> </body> </notes> <listOfReactants> <speciesReference species="s_0796" stoichiometry="1" constant="true"/> <speciesReference species="s_1036" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1035" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0896"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0600"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000185" id="r_1217" name="L-serine transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YKR039W OR YFL055W OR YDR508C OR YPL265W OR YCL025C)</p> </body> </notes> <listOfReactants> <speciesReference species="s_0796" stoichiometry="1" constant="true"/> <speciesReference species="s_1041" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1039" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0102"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0942"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0241"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0316"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0600"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1218" sboTerm="SBO:0000185" id="r_1218" name="L-threonine transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YDR046C OR YKR039W OR YDR508C OR YCL025C OR YBR069C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1218"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/9489675"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0796" stoichiometry="1" constant="true"/> <speciesReference species="s_1046" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1045" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0056"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0102"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0241"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0600"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0173"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1219" sboTerm="SBO:0000185" id="r_1219" name="L-tryptophan transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YKR039W OR YBR068C OR YOL020W OR YDR046C OR YBR069C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1219"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/9573211"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0796" stoichiometry="1" constant="true"/> <speciesReference species="s_1049" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1048" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0056"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0173"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0821"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0055"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0600"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1220" sboTerm="SBO:0000185" id="r_1220" name="L-tyrosine transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YCL038C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1220"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/17021250"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_1055" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1051" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0105"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1221" sboTerm="SBO:0000185" id="r_1221" name="L-tyrosine transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YBR293W OR YJR001W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1221"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/15572352"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0802" stoichiometry="1" constant="true"/> <speciesReference species="s_1051" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1055" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0524"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0094"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1222" sboTerm="SBO:0000185" id="r_1222" name="L-tyrosine transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YKL146W OR YNL101W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1222"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/11274162"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0802" stoichiometry="1" constant="true"/> <speciesReference species="s_1055" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1051" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0777"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0580"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000185" id="r_1223" name="L-tyrosine transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YKR039W OR YBR068C OR YOL020W OR YBR069C OR YDR046C OR YCL025C)</p> </body> </notes> <listOfReactants> <speciesReference species="s_0796" stoichiometry="1" constant="true"/> <speciesReference species="s_1052" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1051" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0102"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0173"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0056"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0821"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0055"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0600"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000185" id="r_1224" name="L-valine transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YDR046C OR YKR039W OR YBR068C OR YCL025C OR YBR069C)</p> </body> </notes> <listOfReactants> <speciesReference species="s_0796" stoichiometry="1" constant="true"/> <speciesReference species="s_1057" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1056" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0056"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0102"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0055"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0600"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0173"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1225" sboTerm="SBO:0000185" id="r_1225" name="lanosterol transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YOR011W OR YIL013C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1225"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/12077145"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_1061" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1059" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0464"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0844"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000185" id="r_1226" name="malate transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YLR348C</p> </body> </notes> <listOfReactants> <speciesReference species="s_0066" stoichiometry="1" constant="true"/> <speciesReference species="s_1326" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0068" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0683"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1227" sboTerm="SBO:0000185" id="r_1227" name="maltose transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YGR289C OR YBR298C OR YDL247W OR YJR160C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1227"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/7483839"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0796" stoichiometry="1" constant="true"/> <speciesReference species="s_1106" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1105" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0555"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0163"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0097"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0415"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1228" sboTerm="SBO:0000185" id="r_1228" name="N,N'-diformyldityrosine transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YBR180W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1228"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/12455697"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_1185" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1186" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0076"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1229" sboTerm="SBO:0000185" id="r_1229" name="NAD transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YEL006W OR YIL006W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1229"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/16291748"/> <rdf:li rdf:resource="http://identifiers.org/pubmed/9169870"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_1198" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1200" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0461"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0247"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1230" sboTerm="SBO:0000185" id="r_1230" name="NAD transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YIL006W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1230"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/16291748"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0585" stoichiometry="1" constant="true"/> <speciesReference species="s_1198" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0584" stoichiometry="1" constant="true"/> <speciesReference species="s_1200" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0461"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1231" sboTerm="SBO:0000185" id="r_1231" name="NAD transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YIL006W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1231"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/16291748"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0424" stoichiometry="1" constant="true"/> <speciesReference species="s_1198" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0423" stoichiometry="1" constant="true"/> <speciesReference species="s_1200" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0461"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1232" sboTerm="SBO:0000185" id="r_1232" name="NAD transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YIL006W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1232"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/16291748"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0616" stoichiometry="1" constant="true"/> <speciesReference species="s_1198" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0615" stoichiometry="1" constant="true"/> <speciesReference species="s_1200" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0461"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1235" sboTerm="SBO:0000185" id="r_1235" name="nicotinate transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YGR260W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1235"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/10869563"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_1220" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1219" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0408"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1236" sboTerm="SBO:0000185" id="r_1236" name="octadecanoate (n-C18:0) transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1236"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/8993619"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_1449" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1451" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0924"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1237" sboTerm="SBO:0000185" id="r_1237" name="ornithine transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YOR130C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1237"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/10428783"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1268" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0799" stoichiometry="1" constant="true"/> <speciesReference species="s_1266" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0861"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000185" id="r_1238" name="orntithine transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YKR039W OR YEL063C)</p> </body> </notes> <listOfReactants> <speciesReference species="s_0796" stoichiometry="1" constant="true"/> <speciesReference species="s_1267" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1266" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0266"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0600"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000185" id="r_1239" name="oxaloacetate transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YKL120W</p> </body> </notes> <listOfReactants> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1271" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0799" stoichiometry="1" constant="true"/> <speciesReference species="s_1273" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0575"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000185" id="r_1241" name="pantothenate transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YCR028C</p> </body> </notes> <listOfReactants> <speciesReference species="s_0032" stoichiometry="1" constant="true"/> <speciesReference species="s_0796" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0031" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0116"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1242" sboTerm="SBO:0000185" id="r_1242" name="pentaprenyl diphosphate transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1242"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/11583838"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_1311" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1313" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="meta_r_1243" sboTerm="SBO:0000185" id="r_1243" name="phenethyl acetate transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1243"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/10653746"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_1316" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1317" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction sboTerm="SBO:0000185" id="r_1244" name="phosphate transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YJL198W OR YBR296C OR YML123C OR YNR013C OR YCR037C)</p> </body> </notes> <listOfReactants> <speciesReference species="s_0796" stoichiometry="1" constant="true"/> <speciesReference species="s_1324" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0120"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0807"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0715"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0096"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0517"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000185" id="r_1245" name="phosphate transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YJR077C OR YER053C)</p> </body> </notes> <listOfReactants> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0799" stoichiometry="1" constant="true"/> <speciesReference species="s_1326" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0282"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0537"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1249" sboTerm="SBO:0000185" id="r_1249" name="potassium transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YJL129C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1249"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/3043197"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0796" stoichiometry="1" constant="true"/> <speciesReference species="s_1374" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1373" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0507"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1250" sboTerm="SBO:0000185" id="r_1250" name="putrescine excretion" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YKL174C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1250"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/15668236"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_1389" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1390" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0584"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1251" sboTerm="SBO:0000185" id="r_1251" name="putrescine transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YOR273C OR YLL028W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1251"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/9920864"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1390" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0796" stoichiometry="1" constant="true"/> <speciesReference species="s_1389" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0616"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0885"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1252" sboTerm="SBO:0000185" id="r_1252" name="putrescine transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YOR273C OR YLL028W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1252"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/11171066"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0802" stoichiometry="1" constant="true"/> <speciesReference species="s_1389" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1391" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0617"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0886"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1253" sboTerm="SBO:0000185" id="r_1253" name="pyridoxine symport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YGL186C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1253"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/12649274"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0796" stoichiometry="1" constant="true"/> <speciesReference species="s_1397" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1396" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0345"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000185" id="r_1254" name="pyruvate transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YKL217W</p> </body> </notes> <listOfReactants> <speciesReference species="s_0796" stoichiometry="1" constant="true"/> <speciesReference species="s_1400" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1399" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0596"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000185" id="r_1255" name="S-adenosyl-L-methionine transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YPL274W</p> </body> </notes> <listOfReactants> <speciesReference species="s_0796" stoichiometry="1" constant="true"/> <speciesReference species="s_1418" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1416" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0946"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1256" sboTerm="SBO:0000185" id="r_1256" name="S-adenosyl-L-methionine transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YNL003C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1256"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/14609944"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_1416" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1419" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0768"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000185" id="r_1257" name="S-methylmethionine permease" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YLL061W</p> </body> </notes> <listOfReactants> <speciesReference species="s_0796" stoichiometry="1" constant="true"/> <speciesReference species="s_1425" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1424" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0624"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000185" id="r_1258" name="sodium proton antiporter" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YLR138W</p> </body> </notes> <listOfReactants> <speciesReference species="s_0796" stoichiometry="1" constant="true"/> <speciesReference species="s_1437" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1438" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0648"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1259" sboTerm="SBO:0000185" id="r_1259" name="spermidine excretion" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YKL174C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1259"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/15668236"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_1439" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1440" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0584"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1260" sboTerm="SBO:0000185" id="r_1260" name="spermidine transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YOR273C OR YBR132C OR YKR039W OR YHL016C OR YPL274W OR YLL028W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1260"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/17218313"/> <rdf:li rdf:resource="http://identifiers.org/pubmed/9920864"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1440" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0796" stoichiometry="1" constant="true"/> <speciesReference species="s_1439" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0616"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0946"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0419"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0885"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0068"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0600"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1261" sboTerm="SBO:0000185" id="r_1261" name="spermidine transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YOR273C OR YLL028W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1261"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/11171066"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0802" stoichiometry="1" constant="true"/> <speciesReference species="s_1439" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1441" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0617"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0886"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1262" sboTerm="SBO:0000185" id="r_1262" name="spermine transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YPR156C OR YGR138C OR YOR273C OR YLL028W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1262"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/9920864"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1443" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0796" stoichiometry="1" constant="true"/> <speciesReference species="s_1442" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0616"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0377"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0885"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0971"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1263" sboTerm="SBO:0000185" id="r_1263" name="spermine transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YPR156C OR YGR138C OR YOR273C OR YLL028W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1263"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/11171066"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0802" stoichiometry="1" constant="true"/> <speciesReference species="s_1442" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1444" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0617"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0378"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0886"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0972"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000185" id="r_1264" name="succinate transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YLR348C</p> </body> </notes> <listOfReactants> <speciesReference species="s_1326" stoichiometry="1" constant="true"/> <speciesReference species="s_1458" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> <speciesReference species="s_1460" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0683"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1265" sboTerm="SBO:0000185" id="r_1265" name="succinate-fumarate transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YJR095W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1265"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/9395087"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0727" stoichiometry="1" constant="true"/> <speciesReference species="s_1458" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0725" stoichiometry="1" constant="true"/> <speciesReference species="s_1460" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0539"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000185" id="r_1266" name="sulfate uniport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YBR294W OR YLR092W)</p> </body> </notes> <listOfReactants> <speciesReference species="s_1468" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1467" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0643"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0095"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1267" sboTerm="SBO:0000185" id="r_1267" name="sulfite transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YPL092W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1267"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/10870099"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_1469" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1470" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0917"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1268" sboTerm="SBO:0000185" id="r_1268" name="taurine transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1268"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/8293962"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_1471" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1472" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="meta_r_1269" sboTerm="SBO:0000185" id="r_1269" name="thiamine diphosphate transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YGR096W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1269"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/12411483"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_1475" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1477" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0374"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000185" id="r_1270" name="thiamine transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YLR237W OR YOR192C OR YOR071C)</p> </body> </notes> <listOfReactants> <speciesReference species="s_0796" stoichiometry="1" constant="true"/> <speciesReference species="s_1490" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1489" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0874"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0849"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0664"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1271" sboTerm="SBO:0000185" id="r_1271" name="UDPgalactose transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YPL244C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1271"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/11284009"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_1541" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1542" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0937"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000185" id="r_1272" name="uracil transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YBR021W</p> </body> </notes> <listOfReactants> <speciesReference species="s_0796" stoichiometry="1" constant="true"/> <speciesReference species="s_1551" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1550" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0042"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000185" id="r_1273" name="urea transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YHL016C</p> </body> </notes> <listOfReactants> <speciesReference species="s_0796" stoichiometry="2" constant="true"/> <speciesReference species="s_1553" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0794" stoichiometry="2" constant="true"/> <speciesReference species="s_1552" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0419"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1274" sboTerm="SBO:0000185" id="r_1274" name="uridine transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YBL042C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1274"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/10827169"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0796" stoichiometry="1" constant="true"/> <speciesReference species="s_1557" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1556" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0027"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1275" sboTerm="SBO:0000185" id="r_1275" name="UTP transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YBR192W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1275"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/16844075"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0716" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1547" stoichiometry="1" constant="true"/> <speciesReference species="s_1559" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0714" stoichiometry="1" constant="true"/> <speciesReference species="s_0799" stoichiometry="1" constant="true"/> <speciesReference species="s_1545" stoichiometry="1" constant="true"/> <speciesReference species="s_1560" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0078"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1276" sboTerm="SBO:0000185" id="r_1276" name="UTP/UMP antiport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YBR192W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1276"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/16194150"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0794" stoichiometry="2" constant="true"/> <speciesReference species="s_1547" stoichiometry="1" constant="true"/> <speciesReference species="s_1559" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0799" stoichiometry="2" constant="true"/> <speciesReference species="s_1545" stoichiometry="1" constant="true"/> <speciesReference species="s_1560" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0078"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1277" sboTerm="SBO:0000185" id="r_1277" name="water diffusion" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YLL052C OR YPR192W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1277"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/9765289"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0805" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0979"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0622"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1278" sboTerm="SBO:0000185" id="r_1278" name="zymosterol transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YOR011W OR YIL013C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1278"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/12077145"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_1571" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1568" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0464"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0844"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_1657" sboTerm="SBO:0000185" id="r_1657" name="arginine transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_1657"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/9874237"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_0965" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0799" stoichiometry="1" constant="true"/> <speciesReference species="s_0967" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction sboTerm="SBO:0000176" id="r_1838" name="homocitrate synthase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YDL131W OR YDL182W)</p> </body> </notes> <listOfReactants> <speciesReference species="s_0182" stoichiometry="1" constant="true"/> <speciesReference species="s_0376" stoichiometry="1" constant="true"/> <speciesReference species="s_0807" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0532" stoichiometry="1" constant="true"/> <speciesReference species="s_0799" stoichiometry="1" constant="true"/> <speciesReference species="s_0834" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0153"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0145"/> </listOfModifiers> </reaction> <reaction sboTerm="SBO:0000176" id="r_2029" name="pyridoxine kinase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YEL029C</p> </body> </notes> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_1396" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0394" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1398" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0253"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2034" sboTerm="SBO:0000185" id="r_2034" name="pyruvate transport" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YGL080W AND (YGR243W OR YHR162W))</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2034"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22628558"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1399" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0799" stoichiometry="1" constant="true"/> <speciesReference species="s_1401" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0981"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0982"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0983"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2079" sboTerm="SBO:0000185" id="r_2079" name="trehalose transporter" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YGR289C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2079"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/10957961"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1520" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0796" stoichiometry="1" constant="true"/> <speciesReference species="s_1521" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0415"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2112" sboTerm="SBO:0000176" id="r_2112" name="kynurenine aminotransferase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YJL060W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2112"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01959"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/18205391"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_1020" stoichiometry="1" constant="true"/> <speciesReference species="s_1399" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0955" stoichiometry="1" constant="true"/> <speciesReference species="s_2763" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0496"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2113" sboTerm="SBO:0000176" id="r_2113" name="spontaneous kynurenic acid to quinaldic acid" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2113"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/18205391"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2763" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2764" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="meta_r_2114" sboTerm="SBO:0000176" id="r_2114" name="spontaneous 2-amino-3-carboxymuconate-6-semialdehyde to quinolinate" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2114"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/18205391"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0147" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1403" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfProducts> </reaction> <reaction metaid="meta_r_2115" sboTerm="SBO:0000176" id="r_2115" name="alcohol dehydrogenase, (acetaldehyde to ethanol)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YOL086C OR YBR145W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2115"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00754"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/12499363"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0359" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1203" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0680" stoichiometry="1" constant="true"/> <speciesReference species="s_1198" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0069"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0834"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2116" sboTerm="SBO:0000176" id="r_2116" name="acetaldehyde dehydrogenase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YMR170C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2116"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00711"/> </rdf:Bag> </bqbiol:is> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0359" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> <speciesReference species="s_1198" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0362" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1203" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0740"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2117" sboTerm="SBO:0000176" id="r_2117" name="phenylalanine transaminase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YHR137W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2117"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00694"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/9491082"/> <rdf:li rdf:resource="http://identifiers.org/pubmed/9491083"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_1399" stoichiometry="1" constant="true"/> <speciesReference species="s_1032" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0951" stoichiometry="1" constant="true"/> <speciesReference species="s_0955" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0451"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2118" sboTerm="SBO:0000176" id="r_2118" name="tryptophan transaminase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YHR137W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2118"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00684"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/9491082"/> <rdf:li rdf:resource="http://identifiers.org/pubmed/9491083"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0951" stoichiometry="1" constant="true"/> <speciesReference species="s_1048" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0855" stoichiometry="1" constant="true"/> <speciesReference species="s_1032" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0451"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2119" sboTerm="SBO:0000176" id="r_2119" name="tyrosine transaminase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YHR137W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2119"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00734"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/9491082"/> <rdf:li rdf:resource="http://identifiers.org/pubmed/9491083"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0204" stoichiometry="1" constant="true"/> <speciesReference species="s_0955" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1399" stoichiometry="1" constant="true"/> <speciesReference species="s_1051" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0451"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2126" sboTerm="SBO:0000176" id="r_2126" name="sedoheptulose bisphosphatase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YKR043C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2126"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01845"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/21663798"/> <rdf:li rdf:resource="http://identifiers.org/pubmed/22672422"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_1426" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1427" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0601"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2127" sboTerm="SBO:0000176" id="r_2127" name="dihydroorotate dehydrogenase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YKL216W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2127"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R01869"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/11921093"/> <rdf:li rdf:resource="http://identifiers.org/pubmed/22672422"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0061" stoichiometry="1" constant="true"/> <speciesReference species="s_1198" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1269" stoichiometry="1" constant="true"/> <speciesReference species="s_1203" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0594"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2131" sboTerm="SBO:0000176" id="r_2131" name="isocitrate dehydrogenase" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDL066W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2131"> <bqbiol:is> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/kegg.reaction/R00267"/> </rdf:Bag> </bqbiol:is> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/1989987"/> <rdf:li rdf:resource="http://identifiers.org/pubmed/8099357"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0941" stoichiometry="1" constant="true"/> <speciesReference species="s_1210" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0182" stoichiometry="1" constant="true"/> <speciesReference species="s_0460" stoichiometry="1" constant="true"/> <speciesReference species="s_1214" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0135"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2132" sboTerm="SBO:0000185" id="r_2132" name="oxoglutarate/malate exchange" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YOR222W OR YPL134C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2132"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/16844075"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0066" stoichiometry="1" constant="true"/> <speciesReference species="s_0182" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0068" stoichiometry="1" constant="true"/> <speciesReference species="s_0180" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0923"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0879"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2140" sboTerm="SBO:0000176" id="r_2140" name="fatty-acyl-CoA synthase (n-C16:0CoA)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YKL182W AND YPL231W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2140"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0373" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="21" constant="true"/> <speciesReference species="s_1101" stoichiometry="7" constant="true"/> <speciesReference species="s_1212" stoichiometry="14" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0456" stoichiometry="7" constant="true"/> <speciesReference species="s_0529" stoichiometry="7" constant="true"/> <speciesReference species="s_0803" stoichiometry="7" constant="true"/> <speciesReference species="s_1207" stoichiometry="14" constant="true"/> <speciesReference species="s_1302" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0586"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0934"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2141" sboTerm="SBO:0000176" id="r_2141" name="fatty-acyl-CoA synthase (n-C18:0CoA)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YKL182W AND YPL231W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2141"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0373" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="24" constant="true"/> <speciesReference species="s_1101" stoichiometry="8" constant="true"/> <speciesReference species="s_1212" stoichiometry="16" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0456" stoichiometry="8" constant="true"/> <speciesReference species="s_0529" stoichiometry="8" constant="true"/> <speciesReference species="s_0803" stoichiometry="8" constant="true"/> <speciesReference species="s_1207" stoichiometry="16" constant="true"/> <speciesReference species="s_1454" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0586"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0934"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2142" sboTerm="SBO:0000176" id="r_2142" name="B-ketoacyl-ACP synthase (acetoacetyl-ACP)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YER061C AND YKL192C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2142"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/8412701"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0372" stoichiometry="1" constant="true"/> <speciesReference species="s_0465" stoichiometry="1" constant="true"/> <speciesReference species="s_0799" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0460" stoichiometry="1" constant="true"/> <speciesReference species="s_1845" stoichiometry="1" constant="true"/> <speciesReference species="s_2770" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0287"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="s_1845"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2143" sboTerm="SBO:0000176" id="r_2143" name="B-ketoacyl-ACP synthase (3-oxo-hexanoyl-ACP)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YER061C AND YKL192C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2143"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/8412701"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2771" stoichiometry="1" constant="true"/> <speciesReference species="s_0465" stoichiometry="1" constant="true"/> <speciesReference species="s_0799" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0460" stoichiometry="1" constant="true"/> <speciesReference species="s_1845" stoichiometry="1" constant="true"/> <speciesReference species="s_2772" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0287"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="s_1845"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2144" sboTerm="SBO:0000176" id="r_2144" name="B-ketoacyl-ACP synthase (3-oxo-octanoyl-ACP)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YER061C AND YKL192C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2144"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/8412701"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2773" stoichiometry="1" constant="true"/> <speciesReference species="s_0465" stoichiometry="1" constant="true"/> <speciesReference species="s_0799" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0460" stoichiometry="1" constant="true"/> <speciesReference species="s_1845" stoichiometry="1" constant="true"/> <speciesReference species="s_2774" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0287"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="s_1845"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2145" sboTerm="SBO:0000176" id="r_2145" name="3-oxoacyl-ACP reductase (3-hydroxybutanoyl-ACP)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YKL055C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2145"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/9388293"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2770" stoichiometry="1" constant="true"/> <speciesReference species="s_1214" stoichiometry="1" constant="true"/> <speciesReference species="s_0799" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1210" stoichiometry="1" constant="true"/> <speciesReference species="s_2775" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0566"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2146" sboTerm="SBO:0000176" id="r_2146" name="3-oxoacyl-ACP reductase (3-hydroxyhexanoyl-ACP)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YKL055C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2146"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/9388293"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2772" stoichiometry="1" constant="true"/> <speciesReference species="s_1214" stoichiometry="1" constant="true"/> <speciesReference species="s_0799" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1210" stoichiometry="1" constant="true"/> <speciesReference species="s_2776" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0566"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2147" sboTerm="SBO:0000176" id="r_2147" name="3-oxoacyl-ACP reductase (3-hydroxyoctanoyl-ACP)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YKL055C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2147"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/9388293"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2774" stoichiometry="1" constant="true"/> <speciesReference species="s_1214" stoichiometry="1" constant="true"/> <speciesReference species="s_0799" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1210" stoichiometry="1" constant="true"/> <speciesReference species="s_2777" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0566"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2148" sboTerm="SBO:0000176" id="r_2148" name="3-hydroxyacyl-thioester dehydratase (trans-but-2-enoyl-ACP)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YHR067W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2148"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/15387819"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2775" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0807" stoichiometry="1" constant="true"/> <speciesReference species="s_2778" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0438"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2149" sboTerm="SBO:0000176" id="r_2149" name="3-hydroxyacyl-thioester dehydratase (trans-hex-2-enoyl-ACP)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YHR067W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2149"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/15387819"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2776" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0807" stoichiometry="1" constant="true"/> <speciesReference species="s_2779" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0438"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2150" sboTerm="SBO:0000176" id="r_2150" name="3-hydroxyacyl-thioester dehydratase (trans-oct-2-enoyl-ACP)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YHR067W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2150"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/15387819"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2777" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0807" stoichiometry="1" constant="true"/> <speciesReference species="s_2780" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0438"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2151" sboTerm="SBO:0000176" id="r_2151" name="enoyl-ACP reductase (butanoyl-ACP)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YBR026C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2151"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/11509667"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2778" stoichiometry="1" constant="true"/> <speciesReference species="s_1214" stoichiometry="1" constant="true"/> <speciesReference species="s_0799" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1210" stoichiometry="1" constant="true"/> <speciesReference species="s_2771" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0044"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2152" sboTerm="SBO:0000176" id="r_2152" name="enoyl-ACP reductase (hexanoyl-ACP)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YBR026C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2152"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/11509667"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2779" stoichiometry="1" constant="true"/> <speciesReference species="s_1214" stoichiometry="1" constant="true"/> <speciesReference species="s_0799" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1210" stoichiometry="1" constant="true"/> <speciesReference species="s_2773" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0044"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2153" sboTerm="SBO:0000176" id="r_2153" name="enoyl-ACP reductase (octanoyl-ACP)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YBR026C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2153"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/11509667"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2780" stoichiometry="1" constant="true"/> <speciesReference species="s_1214" stoichiometry="1" constant="true"/> <speciesReference species="s_0799" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1210" stoichiometry="1" constant="true"/> <speciesReference species="s_1254" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0044"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2154" sboTerm="SBO:0000176" id="r_2154" name="elongase I (3-oxotetradecanoyl-CoA)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YJL196C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2154"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2781" stoichiometry="1" constant="true"/> <speciesReference species="s_2782" stoichiometry="1" constant="true"/> <speciesReference species="s_2783" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2784" stoichiometry="1" constant="true"/> <speciesReference species="s_2785" stoichiometry="1" constant="true"/> <speciesReference species="s_2786" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0986"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2155" sboTerm="SBO:0000176" id="r_2155" name="elongase I (3-oxopalmitoyl-CoA)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YJL196C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2155"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2787" stoichiometry="1" constant="true"/> <speciesReference species="s_2782" stoichiometry="1" constant="true"/> <speciesReference species="s_2783" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2784" stoichiometry="1" constant="true"/> <speciesReference species="s_2785" stoichiometry="1" constant="true"/> <speciesReference species="s_2788" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0986"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2156" sboTerm="SBO:0000176" id="r_2156" name="elongase II (3-oxooctadecanoyl-CoA)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YCR034W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2156"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2789" stoichiometry="1" constant="true"/> <speciesReference species="s_2782" stoichiometry="1" constant="true"/> <speciesReference species="s_2783" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2784" stoichiometry="1" constant="true"/> <speciesReference species="s_2785" stoichiometry="1" constant="true"/> <speciesReference species="s_2790" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0987"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2157" sboTerm="SBO:0000176" id="r_2157" name="elongase II or III (3-oxoicosanoyl-CoA)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YCR034W OR YLR372W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2157"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2791" stoichiometry="1" constant="true"/> <speciesReference species="s_2782" stoichiometry="1" constant="true"/> <speciesReference species="s_2783" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2784" stoichiometry="1" constant="true"/> <speciesReference species="s_2785" stoichiometry="1" constant="true"/> <speciesReference species="s_2792" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0987"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0988"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2158" sboTerm="SBO:0000176" id="r_2158" name="elongase II or III (3-oxodocosanoyl-CoA)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YCR034W OR YLR372W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2158"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2793" stoichiometry="1" constant="true"/> <speciesReference species="s_2782" stoichiometry="1" constant="true"/> <speciesReference species="s_2783" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2784" stoichiometry="1" constant="true"/> <speciesReference species="s_2785" stoichiometry="1" constant="true"/> <speciesReference species="s_2794" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0987"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0988"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2159" sboTerm="SBO:0000176" id="r_2159" name="elongase II or III (3-oxotetracosanoyl-CoA)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YCR034W OR YLR372W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2159"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2795" stoichiometry="1" constant="true"/> <speciesReference species="s_2782" stoichiometry="1" constant="true"/> <speciesReference species="s_2783" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2784" stoichiometry="1" constant="true"/> <speciesReference species="s_2785" stoichiometry="1" constant="true"/> <speciesReference species="s_2796" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0987"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0988"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2160" sboTerm="SBO:0000176" id="r_2160" name="elongase III (3-oxohexacosanoyl-CoA)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YLR372W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2160"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2797" stoichiometry="1" constant="true"/> <speciesReference species="s_2782" stoichiometry="1" constant="true"/> <speciesReference species="s_2783" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2784" stoichiometry="1" constant="true"/> <speciesReference species="s_2785" stoichiometry="1" constant="true"/> <speciesReference species="s_2798" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0988"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2161" sboTerm="SBO:0000176" id="r_2161" name="B-ketoacyl-CoA reductase ((S)-3-hydroxytetradecanoyl-CoA)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YBR159W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2161"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2786" stoichiometry="1" constant="true"/> <speciesReference species="s_2799" stoichiometry="1" constant="true"/> <speciesReference species="s_2783" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2800" stoichiometry="1" constant="true"/> <speciesReference species="s_2801" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0989"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2162" sboTerm="SBO:0000176" id="r_2162" name="B-ketoacyl-CoA reductase ((S)-3-hydroxypalmitoyl-CoA)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YBR159W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2162"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2788" stoichiometry="1" constant="true"/> <speciesReference species="s_2799" stoichiometry="1" constant="true"/> <speciesReference species="s_2783" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2800" stoichiometry="1" constant="true"/> <speciesReference species="s_2802" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0989"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2163" sboTerm="SBO:0000176" id="r_2163" name="B-ketoacyl-CoA reductase (3-hydroxyoctadecanoyl-CoA)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YBR159W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2163"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2790" stoichiometry="1" constant="true"/> <speciesReference species="s_2799" stoichiometry="1" constant="true"/> <speciesReference species="s_2783" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2800" stoichiometry="1" constant="true"/> <speciesReference species="s_2803" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0989"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2164" sboTerm="SBO:0000176" id="r_2164" name="B-ketoacyl-CoA reductase (3-hydroxyicosanoyl-CoA)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YBR159W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2164"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2792" stoichiometry="1" constant="true"/> <speciesReference species="s_2799" stoichiometry="1" constant="true"/> <speciesReference species="s_2783" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2800" stoichiometry="1" constant="true"/> <speciesReference species="s_2804" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0989"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2165" sboTerm="SBO:0000176" id="r_2165" name="B-ketoacyl-CoA reductase (3-hydroxydocosanoyl-CoA)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YBR159W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2165"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2794" stoichiometry="1" constant="true"/> <speciesReference species="s_2799" stoichiometry="1" constant="true"/> <speciesReference species="s_2783" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2800" stoichiometry="1" constant="true"/> <speciesReference species="s_2805" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0989"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2166" sboTerm="SBO:0000176" id="r_2166" name="B-ketoacyl-CoA reductase (3-hydroxytetracosanoyl-CoA)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YBR159W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2166"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2796" stoichiometry="1" constant="true"/> <speciesReference species="s_2799" stoichiometry="1" constant="true"/> <speciesReference species="s_2783" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2800" stoichiometry="1" constant="true"/> <speciesReference species="s_2806" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0989"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2167" sboTerm="SBO:0000176" id="r_2167" name="B-ketoacyl-CoA reductase ((S)-3-hydroxyhexacosanoyl-CoA)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YBR159W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2167"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2798" stoichiometry="1" constant="true"/> <speciesReference species="s_2799" stoichiometry="1" constant="true"/> <speciesReference species="s_2783" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2800" stoichiometry="1" constant="true"/> <speciesReference species="s_2807" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0989"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2168" sboTerm="SBO:0000176" id="r_2168" name="B-hydroxyacyl-CoA dehydratase (trans-tetradec-2-enoyl-CoA)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YJL097W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2168"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2801" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2808" stoichiometry="1" constant="true"/> <speciesReference species="s_2809" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0990"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2169" sboTerm="SBO:0000176" id="r_2169" name="B-hydroxyacyl-CoA dehydratase (trans-hexadec-2-enoyl-CoA)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YJL097W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2169"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2802" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2808" stoichiometry="1" constant="true"/> <speciesReference species="s_2810" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0990"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2170" sboTerm="SBO:0000176" id="r_2170" name="B-hydroxyacyl-CoA dehydratase (trans-octadec-2-enoyl-CoA)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YJL097W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2170"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2803" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2808" stoichiometry="1" constant="true"/> <speciesReference species="s_2811" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0990"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2171" sboTerm="SBO:0000176" id="r_2171" name="B-hydroxyacyl-CoA dehydratase (trans-icos-2-enoyl-CoA)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YJL097W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2171"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2804" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2808" stoichiometry="1" constant="true"/> <speciesReference species="s_2812" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0990"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2172" sboTerm="SBO:0000176" id="r_2172" name="B-hydroxyacyl-CoA dehydratase (trans-docos-2-enoyl-CoA)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YJL097W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2172"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2805" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2808" stoichiometry="1" constant="true"/> <speciesReference species="s_2813" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0990"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2173" sboTerm="SBO:0000176" id="r_2173" name="B-hydroxyacyl-CoA dehydratase (trans-tetracos-2-enoyl-CoA)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YJL097W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2173"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2806" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2808" stoichiometry="1" constant="true"/> <speciesReference species="s_2814" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0990"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2174" sboTerm="SBO:0000176" id="r_2174" name="B-hydroxyacyl-CoA dehydratase (trans-hexacos-2-enoyl-CoA)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YJL097W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2174"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2807" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2808" stoichiometry="1" constant="true"/> <speciesReference species="s_2815" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0990"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2175" sboTerm="SBO:0000176" id="r_2175" name="trans-2-enoyl-CoA reductase (n-C14:0CoA)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDL015C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2175"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2809" stoichiometry="1" constant="true"/> <speciesReference species="s_2799" stoichiometry="1" constant="true"/> <speciesReference species="s_2783" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2800" stoichiometry="1" constant="true"/> <speciesReference species="s_2787" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0991"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2176" sboTerm="SBO:0000176" id="r_2176" name="trans-2-enoyl-CoA reductase (n-C16:0CoA)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDL015C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2176"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2810" stoichiometry="1" constant="true"/> <speciesReference species="s_2799" stoichiometry="1" constant="true"/> <speciesReference species="s_2783" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2800" stoichiometry="1" constant="true"/> <speciesReference species="s_2789" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0991"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2177" sboTerm="SBO:0000176" id="r_2177" name="trans-2-enoyl-CoA reductase (n-C18:0CoA)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDL015C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2177"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2811" stoichiometry="1" constant="true"/> <speciesReference species="s_2799" stoichiometry="1" constant="true"/> <speciesReference species="s_2783" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2800" stoichiometry="1" constant="true"/> <speciesReference species="s_2791" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0991"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2178" sboTerm="SBO:0000176" id="r_2178" name="trans-2-enoyl-CoA reductase (n-C20:0CoA)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDL015C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2178"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2812" stoichiometry="1" constant="true"/> <speciesReference species="s_2799" stoichiometry="1" constant="true"/> <speciesReference species="s_2783" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2800" stoichiometry="1" constant="true"/> <speciesReference species="s_2793" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0991"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2179" sboTerm="SBO:0000176" id="r_2179" name="trans-2-enoyl-CoA reductase (n-C22:0CoA)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDL015C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2179"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2813" stoichiometry="1" constant="true"/> <speciesReference species="s_2799" stoichiometry="1" constant="true"/> <speciesReference species="s_2783" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2800" stoichiometry="1" constant="true"/> <speciesReference species="s_2795" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0991"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2180" sboTerm="SBO:0000176" id="r_2180" name="trans-2-enoyl-CoA reductase (n-C24:0CoA)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDL015C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2180"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2814" stoichiometry="1" constant="true"/> <speciesReference species="s_2799" stoichiometry="1" constant="true"/> <speciesReference species="s_2783" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2800" stoichiometry="1" constant="true"/> <speciesReference species="s_2797" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0991"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2181" sboTerm="SBO:0000176" id="r_2181" name="trans-2-enoyl-CoA reductase (n-C26:0CoA)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDL015C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2181"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2815" stoichiometry="1" constant="true"/> <speciesReference species="s_2799" stoichiometry="1" constant="true"/> <speciesReference species="s_2783" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2800" stoichiometry="1" constant="true"/> <speciesReference species="s_2816" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0991"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2182" sboTerm="SBO:0000176" id="r_2182" name="palmitoyl-CoA desaturase (n-C16:0CoA -> n-C16:1CoA), ER membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YGL055W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2182"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2789" stoichiometry="1" constant="true"/> <speciesReference species="s_2817" stoichiometry="1" constant="true"/> <speciesReference species="s_2818" stoichiometry="1" constant="true"/> <speciesReference species="s_2783" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2819" stoichiometry="1" constant="true"/> <speciesReference species="s_2808" stoichiometry="2" constant="true"/> <speciesReference species="s_2820" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0992"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2183" sboTerm="SBO:0000176" id="r_2183" name="stearoyl-CoA desaturase (n-C18:0CoA -> n-C18:1CoA), ER membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YGL055W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2183"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2791" stoichiometry="1" constant="true"/> <speciesReference species="s_2817" stoichiometry="1" constant="true"/> <speciesReference species="s_2818" stoichiometry="1" constant="true"/> <speciesReference species="s_2783" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2821" stoichiometry="1" constant="true"/> <speciesReference species="s_2808" stoichiometry="2" constant="true"/> <speciesReference species="s_2820" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0992"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2194" sboTerm="SBO:0000176" id="r_2194" name="fatty-acid--CoA ligase (dodecanoate), ER membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YOR317W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2194"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2831" stoichiometry="1" constant="true"/> <speciesReference species="s_2785" stoichiometry="1" constant="true"/> <speciesReference species="s_2832" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2833" stoichiometry="1" constant="true"/> <speciesReference species="s_2834" stoichiometry="1" constant="true"/> <speciesReference species="s_2781" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0993"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2195" sboTerm="SBO:0000176" id="r_2195" name="fatty-acid--CoA ligase (tetradecanoate), ER membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YOR317W OR YMR246W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2195"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2831" stoichiometry="1" constant="true"/> <speciesReference species="s_2785" stoichiometry="1" constant="true"/> <speciesReference species="s_2835" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2833" stoichiometry="1" constant="true"/> <speciesReference species="s_2834" stoichiometry="1" constant="true"/> <speciesReference species="s_2787" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0994"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0993"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2196" sboTerm="SBO:0000176" id="r_2196" name="fatty-acid--CoA ligase (hexadecanoate), ER membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YOR317W OR YMR246W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2196"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2831" stoichiometry="1" constant="true"/> <speciesReference species="s_2785" stoichiometry="1" constant="true"/> <speciesReference species="s_2836" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2833" stoichiometry="1" constant="true"/> <speciesReference species="s_2834" stoichiometry="1" constant="true"/> <speciesReference species="s_2789" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0994"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0993"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2197" sboTerm="SBO:0000176" id="r_2197" name="fatty-acid--CoA ligase (hexadecenoate), ER membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YOR317W OR YMR246W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2197"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2831" stoichiometry="1" constant="true"/> <speciesReference species="s_2785" stoichiometry="1" constant="true"/> <speciesReference species="s_2837" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2833" stoichiometry="1" constant="true"/> <speciesReference species="s_2834" stoichiometry="1" constant="true"/> <speciesReference species="s_2819" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0994"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0993"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2198" sboTerm="SBO:0000176" id="r_2198" name="fatty-acid--CoA ligase (octadecanoate), ER membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YOR317W OR YMR246W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2198"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2831" stoichiometry="1" constant="true"/> <speciesReference species="s_2785" stoichiometry="1" constant="true"/> <speciesReference species="s_2838" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2833" stoichiometry="1" constant="true"/> <speciesReference species="s_2834" stoichiometry="1" constant="true"/> <speciesReference species="s_2791" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0994"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0993"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2199" sboTerm="SBO:0000176" id="r_2199" name="fatty-acid--CoA ligase (octadecenoate), ER membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YOR317W OR YMR246W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2199"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2831" stoichiometry="1" constant="true"/> <speciesReference species="s_2785" stoichiometry="1" constant="true"/> <speciesReference species="s_2839" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2833" stoichiometry="1" constant="true"/> <speciesReference species="s_2834" stoichiometry="1" constant="true"/> <speciesReference species="s_2821" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0994"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0993"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2200" sboTerm="SBO:0000176" id="r_2200" name="fatty-acid--CoA ligase (dodecanoate), lipid particle" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YOR317W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2200"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2840" stoichiometry="1" constant="true"/> <speciesReference species="s_0531" stoichiometry="1" constant="true"/> <speciesReference species="s_2841" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2842" stoichiometry="1" constant="true"/> <speciesReference species="s_0635" stoichiometry="1" constant="true"/> <speciesReference species="s_2843" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0995"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2201" sboTerm="SBO:0000176" id="r_2201" name="fatty-acid--CoA ligase (tetradecanoate), lipid particle" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YOR317W OR YMR246W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2201"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2840" stoichiometry="1" constant="true"/> <speciesReference species="s_0531" stoichiometry="1" constant="true"/> <speciesReference species="s_2844" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2842" stoichiometry="1" constant="true"/> <speciesReference species="s_0635" stoichiometry="1" constant="true"/> <speciesReference species="s_2845" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0996"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0995"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2202" sboTerm="SBO:0000176" id="r_2202" name="fatty-acid--CoA ligase (hexadecanoate), lipid particle" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YOR317W OR YMR246W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2202"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2840" stoichiometry="1" constant="true"/> <speciesReference species="s_0531" stoichiometry="1" constant="true"/> <speciesReference species="s_2846" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2842" stoichiometry="1" constant="true"/> <speciesReference species="s_0635" stoichiometry="1" constant="true"/> <speciesReference species="s_2847" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0996"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0995"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2203" sboTerm="SBO:0000176" id="r_2203" name="fatty-acid--CoA ligase (hexadecenoate), lipid particle" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YOR317W OR YMR246W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2203"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2840" stoichiometry="1" constant="true"/> <speciesReference species="s_0531" stoichiometry="1" constant="true"/> <speciesReference species="s_2848" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2842" stoichiometry="1" constant="true"/> <speciesReference species="s_0635" stoichiometry="1" constant="true"/> <speciesReference species="s_2849" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0996"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0995"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2204" sboTerm="SBO:0000176" id="r_2204" name="fatty-acid--CoA ligase (octadecanoate), lipid particle" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YOR317W OR YMR246W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2204"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2840" stoichiometry="1" constant="true"/> <speciesReference species="s_0531" stoichiometry="1" constant="true"/> <speciesReference species="s_2850" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2842" stoichiometry="1" constant="true"/> <speciesReference species="s_0635" stoichiometry="1" constant="true"/> <speciesReference species="s_2851" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0996"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0995"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2205" sboTerm="SBO:0000176" id="r_2205" name="fatty-acid--CoA ligase (octadecenoate), lipid particle" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YOR317W OR YMR246W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2205"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2840" stoichiometry="1" constant="true"/> <speciesReference species="s_0531" stoichiometry="1" constant="true"/> <speciesReference species="s_2852" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2842" stoichiometry="1" constant="true"/> <speciesReference species="s_0635" stoichiometry="1" constant="true"/> <speciesReference species="s_2853" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0996"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0995"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2206" sboTerm="SBO:0000176" id="r_2206" name="fatty-acid--CoA ligase (hexadecenoate), peroxisome" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YER015W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2206"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0439" stoichiometry="1" constant="true"/> <speciesReference species="s_0534" stoichiometry="1" constant="true"/> <speciesReference species="s_1298" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0426" stoichiometry="1" constant="true"/> <speciesReference species="s_0638" stoichiometry="1" constant="true"/> <speciesReference species="s_2854" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0273"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2207" sboTerm="SBO:0000176" id="r_2207" name="fatty-acid--CoA ligase (octadecanoate), peroxisome" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YER015W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2207"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0439" stoichiometry="1" constant="true"/> <speciesReference species="s_0534" stoichiometry="1" constant="true"/> <speciesReference species="s_1451" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0426" stoichiometry="1" constant="true"/> <speciesReference species="s_0638" stoichiometry="1" constant="true"/> <speciesReference species="s_1457" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0273"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2208" sboTerm="SBO:0000176" id="r_2208" name="fatty-acid--CoA ligase (octadecenoate), peroxisome" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YER015W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2208"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0439" stoichiometry="1" constant="true"/> <speciesReference species="s_0534" stoichiometry="1" constant="true"/> <speciesReference species="s_2855" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0426" stoichiometry="1" constant="true"/> <speciesReference species="s_0638" stoichiometry="1" constant="true"/> <speciesReference species="s_1265" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0273"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2209" sboTerm="SBO:0000176" id="r_2209" name="fatty-acid--CoA ligase (arachidate), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YIL009W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2209"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2856" stoichiometry="1" constant="true"/> <speciesReference species="s_2857" stoichiometry="1" constant="true"/> <speciesReference species="s_2858" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2859" stoichiometry="1" constant="true"/> <speciesReference species="s_2860" stoichiometry="1" constant="true"/> <speciesReference species="s_2861" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0997"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2210" sboTerm="SBO:0000176" id="r_2210" name="fatty-acid--CoA ligase (behenate), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YIL009W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2210"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2856" stoichiometry="1" constant="true"/> <speciesReference species="s_2857" stoichiometry="1" constant="true"/> <speciesReference species="s_2862" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2859" stoichiometry="1" constant="true"/> <speciesReference species="s_2860" stoichiometry="1" constant="true"/> <speciesReference species="s_2863" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0997"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2211" sboTerm="SBO:0000176" id="r_2211" name="fatty-acid--CoA ligase (lignoceric acid), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YIL009W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2211"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2856" stoichiometry="1" constant="true"/> <speciesReference species="s_2857" stoichiometry="1" constant="true"/> <speciesReference species="s_2864" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2859" stoichiometry="1" constant="true"/> <speciesReference species="s_2860" stoichiometry="1" constant="true"/> <speciesReference species="s_2865" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0997"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2212" sboTerm="SBO:0000176" id="r_2212" name="fatty-acid--CoA ligase (cerotic acid), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YIL009W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2212"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2856" stoichiometry="1" constant="true"/> <speciesReference species="s_2857" stoichiometry="1" constant="true"/> <speciesReference species="s_2866" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2859" stoichiometry="1" constant="true"/> <speciesReference species="s_2860" stoichiometry="1" constant="true"/> <speciesReference species="s_2867" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0997"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2213" sboTerm="SBO:0000176" id="r_2213" name="fatty-acid--CoA ligase (behenate), ER membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YBR041W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2213"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2831" stoichiometry="1" constant="true"/> <speciesReference species="s_2785" stoichiometry="1" constant="true"/> <speciesReference species="s_2868" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2833" stoichiometry="1" constant="true"/> <speciesReference species="s_2834" stoichiometry="1" constant="true"/> <speciesReference species="s_2795" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0998"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2214" sboTerm="SBO:0000176" id="r_2214" name="fatty-acid--CoA ligase (lignoceric acid), ER membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YBR041W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2214"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2831" stoichiometry="1" constant="true"/> <speciesReference species="s_2785" stoichiometry="1" constant="true"/> <speciesReference species="s_2869" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2833" stoichiometry="1" constant="true"/> <speciesReference species="s_2834" stoichiometry="1" constant="true"/> <speciesReference species="s_2797" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0998"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2215" sboTerm="SBO:0000176" id="r_2215" name="fatty-acid--CoA ligase (cerotic acid), ER membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YBR041W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2215"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2831" stoichiometry="1" constant="true"/> <speciesReference species="s_2785" stoichiometry="1" constant="true"/> <speciesReference species="s_2870" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2833" stoichiometry="1" constant="true"/> <speciesReference species="s_2834" stoichiometry="1" constant="true"/> <speciesReference species="s_2816" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0998"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2216" sboTerm="SBO:0000176" id="r_2216" name="fatty-acid--CoA ligase (behenate), lipid particle" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YBR041W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2216"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2840" stoichiometry="1" constant="true"/> <speciesReference species="s_0531" stoichiometry="1" constant="true"/> <speciesReference species="s_2871" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2842" stoichiometry="1" constant="true"/> <speciesReference species="s_0635" stoichiometry="1" constant="true"/> <speciesReference species="s_2872" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0999"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2217" sboTerm="SBO:0000176" id="r_2217" name="fatty-acid--CoA ligase (lignoceric acid), lipid particle" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YBR041W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2217"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2840" stoichiometry="1" constant="true"/> <speciesReference species="s_0531" stoichiometry="1" constant="true"/> <speciesReference species="s_2873" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2842" stoichiometry="1" constant="true"/> <speciesReference species="s_0635" stoichiometry="1" constant="true"/> <speciesReference species="s_2874" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0999"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2218" sboTerm="SBO:0000176" id="r_2218" name="fatty-acid--CoA ligase (cerotic acid), lipid particle" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YBR041W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2218"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2840" stoichiometry="1" constant="true"/> <speciesReference species="s_0531" stoichiometry="1" constant="true"/> <speciesReference species="s_2875" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2842" stoichiometry="1" constant="true"/> <speciesReference species="s_0635" stoichiometry="1" constant="true"/> <speciesReference species="s_2876" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0999"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2219" sboTerm="SBO:0000185" id="r_2219" name="fatty acyl-CoA transport via ABC system (C12:0)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YKL188C AND YPL147W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2219"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/17010456"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> <speciesReference species="s_1073" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0394" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1076" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0588"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0924"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2220" sboTerm="SBO:0000185" id="r_2220" name="fatty acyl-CoA transport via ABC system (C14:0)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YKL188C AND YPL147W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2220"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/17010456"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> <speciesReference species="s_1176" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0394" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1179" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0588"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0924"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2221" sboTerm="SBO:0000185" id="r_2221" name="fatty acyl-CoA transport via ABC system (C16:0)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YKL188C AND YPL147W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description 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sboTerm="SBO:0000185" id="r_2222" name="fatty acyl-CoA transport via ABC system (C16:1)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YKL188C AND YPL147W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2222"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/17010456"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> <speciesReference species="s_2877" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0394" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_2854" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0588"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0924"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2223" sboTerm="SBO:0000185" id="r_2223" name="fatty acyl-CoA transport via ABC system (C18:0)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YKL188C AND YPL147W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2223"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/17010456"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> <speciesReference species="s_1454" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0394" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1457" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0588"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0924"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2224" sboTerm="SBO:0000185" id="r_2224" name="fatty acyl-CoA transport via ABC system (C18:1)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YKL188C AND YPL147W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2224"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/17010456"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> <speciesReference species="s_1262" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0394" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_1265" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0588"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0924"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2225" sboTerm="SBO:0000185" id="r_2225" name="fatty acyl-CoA transport via ABC system (C20:0)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YKL188C 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</listOfModifiers> </reaction> <reaction metaid="meta_r_2226" sboTerm="SBO:0000185" id="r_2226" name="fatty acyl-CoA transport via ABC system (C22:0)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YKL188C AND YPL147W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2226"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/17010456"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> <speciesReference species="s_2880" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0394" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> <speciesReference species="s_0794" stoichiometry="1" constant="true"/> <speciesReference species="s_2881" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0588"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0924"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2227" sboTerm="SBO:0000185" id="r_2227" name="fatty acyl-CoA transport via ABC system (C24:0)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YKL188C AND YPL147W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2227"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/17010456"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0434" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> <speciesReference 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reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YJR019C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2232"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/16490786"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2884" stoichiometry="1" constant="true"/> <speciesReference species="s_0809" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0534" stoichiometry="1" constant="true"/> <speciesReference species="s_0801" stoichiometry="1" constant="true"/> <speciesReference species="s_2882" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0529"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2233" sboTerm="SBO:0000176" id="r_2233" name="peroxisomal acyl-CoA thioesterase (6:0)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YJR019C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2233"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/16490786"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2885" stoichiometry="1" constant="true"/> <speciesReference species="s_0809" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0534" stoichiometry="1" constant="true"/> <speciesReference species="s_0801" stoichiometry="1" constant="true"/> <speciesReference species="s_2883" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0529"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2234" sboTerm="SBO:0000176" id="r_2234" name="peroxisomal acyl-CoA thioesterase (16:1)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YJR019C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2234"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/16490786"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2854" stoichiometry="1" constant="true"/> <speciesReference species="s_0809" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0534" stoichiometry="1" constant="true"/> <speciesReference species="s_0801" stoichiometry="1" constant="true"/> <speciesReference species="s_1298" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0529"/> </listOfModifiers> </reaction> <reaction 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fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YLR284C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2300"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/12697341"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2931" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1519" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0669"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2301" sboTerm="SBO:0000176" id="r_2301" name="delta(3,5)-delta(2,4)-dienoyl-CoA isomerase (trans-3,cis-5-dodecadienoyl-CoA)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YOR180C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2301"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/12697341"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2928" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2932" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0871"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2302" sboTerm="SBO:0000176" id="r_2302" name="delta(3,5)-delta(2,4)-dienoyl-CoA isomerase (trans-3,cis-5-tetradecadienoyl-CoA)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YOR180C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2302"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/12697341"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2930" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2933" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0871"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2303" sboTerm="SBO:0000176" id="r_2303" name="2,4-dienoyl-CoA reductase (trans-2,trans-4-dodecadienoyl-CoA)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YNL202W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2303"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/12697341"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2932" stoichiometry="1" constant="true"/> <speciesReference species="s_1215" stoichiometry="1" constant="true"/> <speciesReference species="s_0801" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2929" stoichiometry="1" constant="true"/> <speciesReference species="s_1211" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0790"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2304" sboTerm="SBO:0000176" id="r_2304" name="2,4-dienoyl-CoA reductase (trans-2,trans-4-tetradecadienoyl-CoA)" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YNL202W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2304"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/12697341"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2933" stoichiometry="1" constant="true"/> <speciesReference species="s_1215" stoichiometry="1" constant="true"/> <speciesReference species="s_0801" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2931" stoichiometry="1" constant="true"/> <speciesReference species="s_1211" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0790"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2305" sboTerm="SBO:0000176" id="r_2305" name="cis-aconitate(3-) to isocitrate" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YLR304C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2305"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/15975908"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_0516" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0940" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0675"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2308" sboTerm="SBO:0000176" id="r_2308" name="glycerol-3-phosphate acyltransferase (16:0), ER membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YBL011W OR YKR067W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2308"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2789" stoichiometry="1" constant="true"/> <speciesReference species="s_2934" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2935" stoichiometry="1" constant="true"/> <speciesReference species="s_2785" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1000"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1001"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2309" sboTerm="SBO:0000176" id="r_2309" name="glycerol-3-phosphate acyltransferase (16:1), ER membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YBL011W OR YKR067W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2309"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2819" stoichiometry="1" constant="true"/> <speciesReference species="s_2934" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2936" stoichiometry="1" constant="true"/> <speciesReference species="s_2785" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1000"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1001"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2310" sboTerm="SBO:0000176" id="r_2310" name="glycerol-3-phosphate acyltransferase (18:0), ER membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YKR067W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2310"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2791" stoichiometry="1" constant="true"/> <speciesReference species="s_2934" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2937" stoichiometry="1" constant="true"/> <speciesReference species="s_2785" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1000"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2311" sboTerm="SBO:0000176" id="r_2311" name="glycerol-3-phosphate acyltransferase (18:1), ER membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YKR067W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2311"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2821" stoichiometry="1" constant="true"/> <speciesReference species="s_2934" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2938" stoichiometry="1" constant="true"/> <speciesReference species="s_2785" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1000"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2312" sboTerm="SBO:0000176" id="r_2312" name="dihydroxyacetone phosphate acyltransferase (16:0), ER membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YBL011W OR YKR067W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2312"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2789" stoichiometry="1" constant="true"/> <speciesReference species="s_2939" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2940" stoichiometry="1" constant="true"/> <speciesReference species="s_2785" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1000"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1001"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2313" sboTerm="SBO:0000176" id="r_2313" name="dihydroxyacetone phosphate acyltransferase (16:1), ER membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YBL011W OR YKR067W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2313"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li 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rdf:about="#meta_r_2323"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2853" stoichiometry="1" constant="true"/> <speciesReference species="s_0631" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2951" stoichiometry="1" constant="true"/> <speciesReference species="s_0531" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0607"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2324" sboTerm="SBO:0000176" id="r_2324" name="acyl dhap reductase (16:0), ER membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YIL124W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2324"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2940" stoichiometry="1" constant="true"/> <speciesReference species="s_2799" stoichiometry="1" constant="true"/> <speciesReference species="s_2783" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2800" stoichiometry="1" constant="true"/> <speciesReference species="s_2935" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1002"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2325" sboTerm="SBO:0000176" id="r_2325" name="acyl dhap reductase (16:1), ER membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YIL124W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2325"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2941" stoichiometry="1" constant="true"/> <speciesReference species="s_2799" stoichiometry="1" constant="true"/> <speciesReference species="s_2783" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2800" stoichiometry="1" constant="true"/> <speciesReference species="s_2936" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1002"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2326" sboTerm="SBO:0000176" id="r_2326" name="acyl dhap reductase (18:0), ER membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YIL124W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2326"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2942" stoichiometry="1" constant="true"/> <speciesReference species="s_2799" stoichiometry="1" constant="true"/> <speciesReference species="s_2783" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2800" stoichiometry="1" constant="true"/> <speciesReference species="s_2937" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1002"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2327" sboTerm="SBO:0000176" id="r_2327" name="acyl dhap reductase (18:1), ER membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YIL124W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2327"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2943" stoichiometry="1" constant="true"/> <speciesReference species="s_2799" stoichiometry="1" constant="true"/> <speciesReference species="s_2783" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2800" stoichiometry="1" constant="true"/> <speciesReference species="s_2938" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1002"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2328" sboTerm="SBO:0000176" id="r_2328" name="acyl dhap reductase (16:0), lipid particle" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YIL124W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2328"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2948" stoichiometry="1" constant="true"/> <speciesReference species="s_2952" stoichiometry="1" constant="true"/> <speciesReference species="s_0798" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2953" stoichiometry="1" constant="true"/> <speciesReference species="s_2944" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1003"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2329" sboTerm="SBO:0000176" id="r_2329" name="acyl dhap reductase (16:1), lipid particle" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YIL124W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2329"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2949" stoichiometry="1" constant="true"/> <speciesReference species="s_2952" stoichiometry="1" constant="true"/> <speciesReference species="s_0798" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2953" stoichiometry="1" constant="true"/> <speciesReference species="s_2945" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1003"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2330" sboTerm="SBO:0000176" id="r_2330" name="acyl dhap reductase (18:0), lipid particle" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YIL124W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2330"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2950" stoichiometry="1" constant="true"/> <speciesReference species="s_2952" stoichiometry="1" constant="true"/> <speciesReference species="s_0798" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2953" stoichiometry="1" constant="true"/> <speciesReference species="s_2946" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1003"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2331" sboTerm="SBO:0000176" id="r_2331" name="acyl dhap reductase (18:1), lipid particle" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YIL124W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2331"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2951" stoichiometry="1" constant="true"/> <speciesReference species="s_2952" stoichiometry="1" constant="true"/> <speciesReference species="s_0798" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2953" stoichiometry="1" constant="true"/> <speciesReference species="s_2947" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1003"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2332" sboTerm="SBO:0000176" id="r_2332" name="1-acyl-sn-glycerol-3-phosphate acyltransferase (1-16:0, 2-16:1), ER membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YOR175C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2332"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2935" stoichiometry="1" constant="true"/> <speciesReference species="s_2819" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2785" stoichiometry="1" constant="true"/> <speciesReference species="s_2954" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1004"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2333" sboTerm="SBO:0000176" id="r_2333" name="1-acyl-sn-glycerol-3-phosphate acyltransferase (1-16:0, 2-18:1), ER membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YDL052C OR YOR175C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2333"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2935" stoichiometry="1" constant="true"/> <speciesReference species="s_2821" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2785" stoichiometry="1" constant="true"/> <speciesReference species="s_2955" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1004"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1005"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2334" sboTerm="SBO:0000176" id="r_2334" name="1-acyl-sn-glycerol-3-phosphate acyltransferase (1-16:1, 2-16:1), ER membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YOR175C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2334"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2936" stoichiometry="1" constant="true"/> <speciesReference species="s_2819" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2785" stoichiometry="1" constant="true"/> <speciesReference species="s_2956" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1004"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2335" sboTerm="SBO:0000176" id="r_2335" name="1-acyl-sn-glycerol-3-phosphate acyltransferase (1-16:1, 2-18:1), ER membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YDL052C OR YOR175C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2335"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2936" stoichiometry="1" constant="true"/> <speciesReference species="s_2821" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2785" stoichiometry="1" constant="true"/> <speciesReference species="s_2957" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1004"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1005"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2336" sboTerm="SBO:0000176" id="r_2336" name="1-acyl-sn-glycerol-3-phosphate acyltransferase (1-18:0, 2-16:1), ER membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YOR175C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2336"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2937" stoichiometry="1" constant="true"/> <speciesReference species="s_2819" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2785" stoichiometry="1" constant="true"/> <speciesReference species="s_2958" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1004"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2337" sboTerm="SBO:0000176" id="r_2337" name="1-acyl-sn-glycerol-3-phosphate acyltransferase (1-18:0, 2-18:1), ER membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YDL052C OR YOR175C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2337"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2937" stoichiometry="1" constant="true"/> <speciesReference species="s_2821" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2785" stoichiometry="1" constant="true"/> <speciesReference species="s_2959" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1004"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1005"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2338" sboTerm="SBO:0000176" id="r_2338" name="1-acyl-sn-glycerol-3-phosphate acyltransferase (1-18:1, 2-16:1), ER membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YOR175C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2338"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2938" stoichiometry="1" constant="true"/> <speciesReference species="s_2819" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2785" stoichiometry="1" constant="true"/> <speciesReference species="s_2960" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1004"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2339" sboTerm="SBO:0000176" id="r_2339" name="1-acyl-sn-glycerol-3-phosphate acyltransferase (1-18:1, 2-18:1), ER membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YDL052C OR YOR175C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2339"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2938" stoichiometry="1" constant="true"/> <speciesReference species="s_2821" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2785" stoichiometry="1" constant="true"/> <speciesReference species="s_2961" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1004"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1005"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2340" sboTerm="SBO:0000176" id="r_2340" name="1-acyl-sn-glycerol-3-phosphate acyltransferase (1-16:0, 2-18:1), lipid particle" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YDL052C OR YKR089C OR YOR081C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2340"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2944" stoichiometry="1" constant="true"/> <speciesReference species="s_2853" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0531" stoichiometry="1" constant="true"/> <speciesReference species="s_2962" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0611"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0851"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0133"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2341" sboTerm="SBO:0000176" id="r_2341" name="1-acyl-sn-glycerol-3-phosphate acyltransferase (1-16:1, 2-18:1), lipid particle" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YDL052C OR YKR089C OR YOR081C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2341"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> 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<listOfProducts> <speciesReference species="s_2785" stoichiometry="1" constant="true"/> <speciesReference species="s_3014" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1009"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1010"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1011"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2372" sboTerm="SBO:0000176" id="r_2372" name="diacylglycerol acyltransferase (1-18:0, 2-16:1, 3-16:0), ER membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YOR245C OR YCR048W OR YNR019W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2372"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> 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<p>GENE_ASSOCIATION:(YOR245C OR YCR048W OR YNR019W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2387"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2970" stoichiometry="1" constant="true"/> <speciesReference species="s_2791" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2785" stoichiometry="1" constant="true"/> <speciesReference species="s_3030" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1009"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1010"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1011"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2388" sboTerm="SBO:0000176" id="r_2388" 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reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YGR170W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2482"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3169" stoichiometry="1" constant="true"/> <speciesReference species="s_3164" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3165" stoichiometry="1" constant="true"/> <speciesReference species="s_3170" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1019"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2483" sboTerm="SBO:0000176" id="r_2483" name="PS decarboxylase (1-18:1, 2-16:1), vacuolar membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YGR170W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2483"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3171" stoichiometry="1" constant="true"/> <speciesReference species="s_3164" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3165" stoichiometry="1" constant="true"/> <speciesReference species="s_3172" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1019"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2484" sboTerm="SBO:0000176" id="r_2484" name="PS decarboxylase (1-16:0, 2-18:1), vacuolar membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YGR170W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2484"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3173" stoichiometry="1" constant="true"/> <speciesReference species="s_3164" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3165" stoichiometry="1" constant="true"/> <speciesReference species="s_3174" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1019"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2485" sboTerm="SBO:0000176" id="r_2485" name="PS decarboxylase (1-16:1, 2-18:1), vacuolar membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YGR170W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2485"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3175" stoichiometry="1" constant="true"/> <speciesReference species="s_3164" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3165" stoichiometry="1" constant="true"/> <speciesReference species="s_3176" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1019"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2486" sboTerm="SBO:0000176" id="r_2486" name="PS decarboxylase (1-18:0, 2-18:1), vacuolar membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YGR170W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2486"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3177" stoichiometry="1" constant="true"/> <speciesReference species="s_3164" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3165" stoichiometry="1" constant="true"/> <speciesReference species="s_3178" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1019"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2487" sboTerm="SBO:0000176" id="r_2487" name="PS decarboxylase (1-18:1, 2-18:1), vacuolar membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YGR170W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2487"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3179" stoichiometry="1" constant="true"/> <speciesReference species="s_3164" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3165" stoichiometry="1" constant="true"/> <speciesReference species="s_3180" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1019"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2488" sboTerm="SBO:0000176" id="r_2488" name="PE methyltransferase (1-16:0, 2-16:1), ER membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YGR157W OR YJR073C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2488"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3181" stoichiometry="1" constant="true"/> <speciesReference species="s_3182" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2783" stoichiometry="1" constant="true"/> <speciesReference species="s_3183" stoichiometry="1" constant="true"/> <speciesReference species="s_3184" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1020"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1021"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2489" sboTerm="SBO:0000176" id="r_2489" name="PE methyltransferase (1-16:1, 2-16:1), ER membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YGR157W OR YJR073C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2489"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3185" stoichiometry="1" constant="true"/> <speciesReference species="s_3182" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2783" stoichiometry="1" constant="true"/> <speciesReference species="s_3183" stoichiometry="1" constant="true"/> <speciesReference species="s_3186" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1020"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1021"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2490" sboTerm="SBO:0000176" id="r_2490" name="PE methyltransferase (1-18:0, 2-16:1), ER membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YGR157W OR YJR073C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2490"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3187" stoichiometry="1" constant="true"/> <speciesReference species="s_3182" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2783" stoichiometry="1" constant="true"/> <speciesReference species="s_3183" stoichiometry="1" constant="true"/> <speciesReference species="s_3188" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1020"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1021"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2491" sboTerm="SBO:0000176" id="r_2491" name="PE methyltransferase (1-18:1, 2-16:1), ER membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YGR157W OR YJR073C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2491"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3189" stoichiometry="1" constant="true"/> <speciesReference species="s_3182" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2783" stoichiometry="1" constant="true"/> <speciesReference species="s_3183" stoichiometry="1" constant="true"/> <speciesReference species="s_3190" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1020"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1021"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2492" sboTerm="SBO:0000176" id="r_2492" name="PE methyltransferase (1-16:0, 2-18:1), ER membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YGR157W OR YJR073C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2492"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3191" stoichiometry="1" constant="true"/> <speciesReference species="s_3182" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2783" stoichiometry="1" constant="true"/> <speciesReference species="s_3183" stoichiometry="1" constant="true"/> <speciesReference species="s_3192" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1020"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1021"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2493" sboTerm="SBO:0000176" id="r_2493" name="PE methyltransferase (1-16:1, 2-18:1), ER membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YGR157W OR YJR073C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2493"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3193" stoichiometry="1" constant="true"/> <speciesReference species="s_3182" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2783" stoichiometry="1" constant="true"/> <speciesReference species="s_3183" stoichiometry="1" constant="true"/> <speciesReference species="s_3194" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1020"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1021"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2494" sboTerm="SBO:0000176" id="r_2494" name="PE methyltransferase (1-18:0, 2-18:1), ER membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YGR157W OR YJR073C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2494"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3195" stoichiometry="1" constant="true"/> <speciesReference species="s_3182" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2783" stoichiometry="1" constant="true"/> <speciesReference species="s_3183" stoichiometry="1" constant="true"/> <speciesReference species="s_3196" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1020"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1021"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2495" sboTerm="SBO:0000176" id="r_2495" name="PE methyltransferase (1-18:1, 2-18:1), ER membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YGR157W OR YJR073C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2495"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3197" stoichiometry="1" constant="true"/> <speciesReference species="s_3182" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2783" stoichiometry="1" constant="true"/> <speciesReference species="s_3183" stoichiometry="1" constant="true"/> <speciesReference species="s_3198" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1020"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1021"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2496" sboTerm="SBO:0000176" id="r_2496" name="phosphatidyl-N-methylethanolamine methyltransferase (1-16:0, 2-16:1), ER membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YJR073C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2496"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3184" stoichiometry="1" constant="true"/> <speciesReference species="s_3182" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2783" stoichiometry="1" constant="true"/> <speciesReference species="s_3183" stoichiometry="1" constant="true"/> <speciesReference species="s_3199" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1021"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2497" sboTerm="SBO:0000176" id="r_2497" name="phosphatidyl-N-methylethanolamine methyltransferase (1-16:1, 2-16:1), ER membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YJR073C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2497"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3186" stoichiometry="1" constant="true"/> <speciesReference species="s_3182" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2783" stoichiometry="1" constant="true"/> <speciesReference species="s_3183" stoichiometry="1" constant="true"/> <speciesReference species="s_3200" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1021"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2498" sboTerm="SBO:0000176" id="r_2498" name="phosphatidyl-N-methylethanolamine methyltransferase (1-18:0, 2-16:1), ER membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YJR073C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2498"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3188" stoichiometry="1" constant="true"/> <speciesReference species="s_3182" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2783" stoichiometry="1" constant="true"/> <speciesReference species="s_3183" stoichiometry="1" constant="true"/> <speciesReference species="s_3201" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1021"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2499" sboTerm="SBO:0000176" id="r_2499" name="phosphatidyl-N-methylethanolamine methyltransferase (1-18:1, 2-16:1), ER membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YJR073C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2499"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3190" stoichiometry="1" constant="true"/> <speciesReference species="s_3182" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2783" stoichiometry="1" constant="true"/> <speciesReference species="s_3183" stoichiometry="1" constant="true"/> <speciesReference 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</bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2969" stoichiometry="1" constant="true"/> <speciesReference species="s_3216" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3108" stoichiometry="1" constant="true"/> <speciesReference species="s_2783" stoichiometry="1" constant="true"/> <speciesReference species="s_3185" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1023"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2522" sboTerm="SBO:0000176" id="r_2522" name="ethanolaminephosphotransferase (1-18:0, 2-16:1), ER membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YHR123W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2522"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2971" stoichiometry="1" constant="true"/> <speciesReference species="s_3216" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3108" stoichiometry="1" constant="true"/> <speciesReference species="s_2783" stoichiometry="1" constant="true"/> <speciesReference species="s_3187" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1023"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2523" sboTerm="SBO:0000176" id="r_2523" name="ethanolaminephosphotransferase (1-18:1, 2-16:1), ER membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YHR123W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2523"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2973" stoichiometry="1" constant="true"/> <speciesReference species="s_3216" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3108" stoichiometry="1" constant="true"/> <speciesReference species="s_2783" stoichiometry="1" constant="true"/> <speciesReference species="s_3189" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1023"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2524" sboTerm="SBO:0000176" id="r_2524" name="ethanolaminephosphotransferase (1-16:0, 2-18:1), ER membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YHR123W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2524"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2968" stoichiometry="1" constant="true"/> <speciesReference species="s_3216" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3108" stoichiometry="1" constant="true"/> <speciesReference species="s_2783" stoichiometry="1" constant="true"/> <speciesReference species="s_3191" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1023"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2525" sboTerm="SBO:0000176" id="r_2525" name="ethanolaminephosphotransferase (1-16:1, 2-18:1), ER membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YHR123W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2525"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2970" stoichiometry="1" constant="true"/> <speciesReference species="s_3216" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3108" stoichiometry="1" constant="true"/> <speciesReference species="s_2783" stoichiometry="1" constant="true"/> <speciesReference species="s_3193" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1023"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2526" sboTerm="SBO:0000176" id="r_2526" name="ethanolaminephosphotransferase (1-18:0, 2-18:1), ER membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YHR123W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2526"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2972" stoichiometry="1" constant="true"/> <speciesReference species="s_3216" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3108" stoichiometry="1" constant="true"/> <speciesReference species="s_2783" stoichiometry="1" constant="true"/> <speciesReference species="s_3195" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1023"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2527" sboTerm="SBO:0000176" id="r_2527" name="ethanolaminephosphotransferase (1-18:1, 2-18:1), ER membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YHR123W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2527"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2974" stoichiometry="1" constant="true"/> <speciesReference species="s_3216" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3108" stoichiometry="1" constant="true"/> <speciesReference species="s_2783" stoichiometry="1" constant="true"/> <speciesReference species="s_3197" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1023"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2528" sboTerm="SBO:0000176" id="r_2528" name="cholinephosphotransferase (1-16:0, 2-16:1), ER membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YHR123W OR YNL130C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2528"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2967" stoichiometry="1" constant="true"/> <speciesReference species="s_3217" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3108" stoichiometry="1" constant="true"/> <speciesReference species="s_2783" stoichiometry="1" constant="true"/> <speciesReference species="s_3207" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1024"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1023"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2529" sboTerm="SBO:0000176" id="r_2529" name="cholinephosphotransferase (1-16:1, 2-16:1), ER membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YHR123W OR YNL130C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2529"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2969" stoichiometry="1" constant="true"/> <speciesReference species="s_3217" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3108" stoichiometry="1" constant="true"/> <speciesReference species="s_2783" stoichiometry="1" constant="true"/> <speciesReference 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stoichiometry="1" constant="true"/> <speciesReference species="s_2783" stoichiometry="1" constant="true"/> <speciesReference species="s_3209" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1024"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1023"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2531" sboTerm="SBO:0000176" id="r_2531" name="cholinephosphotransferase (1-18:1, 2-16:1), ER membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YHR123W OR YNL130C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2531"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2973" stoichiometry="1" constant="true"/> <speciesReference species="s_3217" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3108" stoichiometry="1" constant="true"/> <speciesReference species="s_2783" stoichiometry="1" constant="true"/> <speciesReference species="s_3210" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1024"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1023"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2532" sboTerm="SBO:0000176" id="r_2532" name="cholinephosphotransferase (1-16:0, 2-18:1), ER membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YHR123W OR YNL130C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2532"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2968" stoichiometry="1" constant="true"/> <speciesReference species="s_3217" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3108" stoichiometry="1" constant="true"/> <speciesReference species="s_2783" stoichiometry="1" constant="true"/> <speciesReference species="s_3211" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1024"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1023"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2533" sboTerm="SBO:0000176" id="r_2533" name="cholinephosphotransferase (1-16:1, 2-18:1), ER membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YHR123W OR YNL130C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2533"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2970" stoichiometry="1" constant="true"/> <speciesReference species="s_3217" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3108" stoichiometry="1" constant="true"/> <speciesReference species="s_2783" stoichiometry="1" constant="true"/> <speciesReference species="s_3212" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1024"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1023"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2534" sboTerm="SBO:0000176" id="r_2534" name="cholinephosphotransferase (1-18:0, 2-18:1), ER membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YHR123W OR YNL130C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2534"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2972" stoichiometry="1" constant="true"/> <speciesReference species="s_3217" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3108" stoichiometry="1" constant="true"/> <speciesReference species="s_2783" stoichiometry="1" constant="true"/> <speciesReference species="s_3213" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1024"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1023"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2535" sboTerm="SBO:0000176" id="r_2535" name="cholinephosphotransferase (1-18:1, 2-18:1), ER membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YHR123W OR YNL130C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2535"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_2974" stoichiometry="1" constant="true"/> <speciesReference species="s_3217" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3108" stoichiometry="1" constant="true"/> <speciesReference species="s_2783" stoichiometry="1" constant="true"/> <speciesReference species="s_3214" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1024"/> <modifierSpeciesReference 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constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1025"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2537" sboTerm="SBO:0000176" id="r_2537" name="phosphatidylglycerolphosphate synthase (1-16:1, 2-16:1), mitochondrial membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YCL004W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2537"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3098" stoichiometry="1" constant="true"/> <speciesReference species="s_3218" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3219" stoichiometry="1" constant="true"/> <speciesReference species="s_3094" stoichiometry="1" constant="true"/> <speciesReference species="s_3221" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1025"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2538" sboTerm="SBO:0000176" id="r_2538" name="phosphatidylglycerolphosphate synthase (1-18:0, 2-16:1), mitochondrial membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YCL004W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2538"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3100" stoichiometry="1" constant="true"/> <speciesReference species="s_3218" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3219" stoichiometry="1" 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sboTerm="SBO:0000176" id="r_2823" name="phosphatidylinositol 4-kinase (1-18:1, 2-16:1), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YJL100W OR YLR305C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2823"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3330" stoichiometry="1" constant="true"/> <speciesReference species="s_2856" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3324" stoichiometry="1" constant="true"/> <speciesReference species="s_0793" stoichiometry="1" constant="true"/> <speciesReference species="s_3331" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0502"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0677"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2824" sboTerm="SBO:0000176" id="r_2824" name="phosphatidylinositol 4-kinase (1-16:0, 2-18:1), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YJL100W OR YLR305C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2824"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3332" stoichiometry="1" constant="true"/> <speciesReference species="s_2856" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3324" stoichiometry="1" constant="true"/> <speciesReference species="s_0793" stoichiometry="1" constant="true"/> <speciesReference species="s_3333" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0502"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0677"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2825" sboTerm="SBO:0000176" id="r_2825" name="phosphatidylinositol 4-kinase (1-16:1, 2-18:1), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YJL100W OR YLR305C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2825"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3334" stoichiometry="1" constant="true"/> <speciesReference species="s_2856" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3324" stoichiometry="1" constant="true"/> <speciesReference species="s_0793" stoichiometry="1" constant="true"/> <speciesReference species="s_3335" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0502"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0677"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2826" sboTerm="SBO:0000176" id="r_2826" name="phosphatidylinositol 4-kinase (1-18:0, 2-18:1), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YJL100W OR YLR305C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2826"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3336" stoichiometry="1" constant="true"/> <speciesReference species="s_2856" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3324" stoichiometry="1" constant="true"/> <speciesReference species="s_0793" stoichiometry="1" constant="true"/> <speciesReference species="s_3337" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0502"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0677"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2827" sboTerm="SBO:0000176" id="r_2827" name="phosphatidylinositol 4-kinase (1-18:1, 2-18:1), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YJL100W OR YLR305C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2827"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3338" stoichiometry="1" constant="true"/> <speciesReference species="s_2856" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3324" stoichiometry="1" constant="true"/> <speciesReference species="s_0793" stoichiometry="1" constant="true"/> <speciesReference species="s_3339" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0502"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0677"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2828" sboTerm="SBO:0000176" id="r_2828" name="phosphatidylinositol 4-kinase (1-16:0, 2-16:1), vacuolar membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YJL100W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2828"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3340" stoichiometry="1" constant="true"/> <speciesReference species="s_3341" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3342" stoichiometry="1" constant="true"/> <speciesReference species="s_3164" stoichiometry="1" constant="true"/> <speciesReference species="s_3343" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1030"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2829" sboTerm="SBO:0000176" id="r_2829" name="phosphatidylinositol 4-kinase (1-16:1, 2-16:1), vacuolar membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YJL100W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2829"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3344" stoichiometry="1" constant="true"/> <speciesReference species="s_3341" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3342" stoichiometry="1" constant="true"/> <speciesReference species="s_3164" stoichiometry="1" constant="true"/> <speciesReference species="s_3345" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1030"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2830" sboTerm="SBO:0000176" id="r_2830" name="phosphatidylinositol 4-kinase (1-18:0, 2-16:1), vacuolar membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YJL100W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2830"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3346" stoichiometry="1" constant="true"/> <speciesReference species="s_3341" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3342" stoichiometry="1" constant="true"/> <speciesReference species="s_3164" stoichiometry="1" constant="true"/> <speciesReference species="s_3347" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1030"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2831" sboTerm="SBO:0000176" id="r_2831" name="phosphatidylinositol 4-kinase (1-18:1, 2-16:1), vacuolar membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YJL100W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2831"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3348" stoichiometry="1" constant="true"/> <speciesReference species="s_3341" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3342" stoichiometry="1" constant="true"/> <speciesReference species="s_3164" stoichiometry="1" constant="true"/> <speciesReference species="s_3349" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1030"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2832" sboTerm="SBO:0000176" id="r_2832" name="phosphatidylinositol 4-kinase (1-16:0, 2-18:1), vacuolar membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YJL100W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2832"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3350" stoichiometry="1" constant="true"/> <speciesReference species="s_3341" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3342" stoichiometry="1" constant="true"/> <speciesReference species="s_3164" stoichiometry="1" constant="true"/> <speciesReference species="s_3351" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1030"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2833" sboTerm="SBO:0000176" id="r_2833" name="phosphatidylinositol 4-kinase (1-16:1, 2-18:1), vacuolar membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YJL100W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2833"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3352" stoichiometry="1" constant="true"/> <speciesReference species="s_3341" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3342" stoichiometry="1" constant="true"/> <speciesReference species="s_3164" stoichiometry="1" constant="true"/> <speciesReference species="s_3353" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1030"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2834" sboTerm="SBO:0000176" id="r_2834" name="phosphatidylinositol 4-kinase (1-18:0, 2-18:1), vacuolar membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YJL100W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2834"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3354" stoichiometry="1" constant="true"/> <speciesReference species="s_3341" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3342" stoichiometry="1" constant="true"/> <speciesReference species="s_3164" stoichiometry="1" constant="true"/> <speciesReference species="s_3355" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1030"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2835" sboTerm="SBO:0000176" id="r_2835" name="phosphatidylinositol 4-kinase (1-18:1, 2-18:1), vacuolar membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YJL100W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2835"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3356" stoichiometry="1" constant="true"/> <speciesReference species="s_3341" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3342" stoichiometry="1" constant="true"/> <speciesReference species="s_3164" stoichiometry="1" constant="true"/> <speciesReference 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species="s_3146" stoichiometry="1" constant="true"/> <speciesReference species="s_3361" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1031"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1032"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2837" sboTerm="SBO:0000176" id="r_2837" name="phosphatidylinositol 4-kinase (1-16:1, 2-16:1), Golgi membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YNL267W AND YDR373W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2837"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3362" stoichiometry="1" constant="true"/> <speciesReference species="s_3359" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3360" stoichiometry="1" constant="true"/> <speciesReference species="s_3146" stoichiometry="1" constant="true"/> <speciesReference species="s_3363" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1031"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1032"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2838" sboTerm="SBO:0000176" id="r_2838" name="phosphatidylinositol 4-kinase (1-18:0, 2-16:1), Golgi membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YNL267W AND YDR373W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2838"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3364" stoichiometry="1" constant="true"/> <speciesReference species="s_3359" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3360" stoichiometry="1" constant="true"/> <speciesReference species="s_3146" stoichiometry="1" constant="true"/> <speciesReference species="s_3365" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1031"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1032"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2839" sboTerm="SBO:0000176" id="r_2839" name="phosphatidylinositol 4-kinase (1-18:1, 2-16:1), Golgi membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YNL267W AND YDR373W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2839"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3366" stoichiometry="1" constant="true"/> <speciesReference species="s_3359" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3360" stoichiometry="1" constant="true"/> <speciesReference species="s_3146" stoichiometry="1" constant="true"/> <speciesReference species="s_3367" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1031"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1032"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2840" sboTerm="SBO:0000176" id="r_2840" name="phosphatidylinositol 4-kinase (1-16:0, 2-18:1), Golgi membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YNL267W AND YDR373W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2840"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3368" stoichiometry="1" constant="true"/> <speciesReference species="s_3359" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3360" stoichiometry="1" constant="true"/> <speciesReference species="s_3146" stoichiometry="1" constant="true"/> <speciesReference species="s_3369" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1031"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1032"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2841" sboTerm="SBO:0000176" id="r_2841" name="phosphatidylinositol 4-kinase (1-16:1, 2-18:1), Golgi membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YNL267W AND YDR373W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2841"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3370" stoichiometry="1" constant="true"/> <speciesReference species="s_3359" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3360" stoichiometry="1" constant="true"/> <speciesReference species="s_3146" stoichiometry="1" constant="true"/> <speciesReference species="s_3371" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1031"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1032"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2842" sboTerm="SBO:0000176" id="r_2842" name="phosphatidylinositol 4-kinase (1-18:0, 2-18:1), Golgi membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YNL267W AND YDR373W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2842"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3372" stoichiometry="1" constant="true"/> <speciesReference species="s_3359" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3360" stoichiometry="1" constant="true"/> <speciesReference species="s_3146" stoichiometry="1" constant="true"/> <speciesReference species="s_3373" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1031"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1032"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2843" sboTerm="SBO:0000176" id="r_2843" name="phosphatidylinositol 4-kinase (1-18:1, 2-18:1), Golgi membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YNL267W AND YDR373W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2843"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3374" stoichiometry="1" constant="true"/> <speciesReference species="s_3359" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3360" stoichiometry="1" constant="true"/> <speciesReference species="s_3146" stoichiometry="1" constant="true"/> <speciesReference species="s_3375" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1031"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1032"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2844" sboTerm="SBO:0000176" id="r_2844" name="phosphatidylinositol 4-kinase (1-16:0, 2-16:1), nucleus" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YNL267W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2844"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3376" stoichiometry="1" constant="true"/> <speciesReference species="s_0438" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0398" stoichiometry="1" constant="true"/> <speciesReference species="s_0800" stoichiometry="1" constant="true"/> <speciesReference species="s_3377" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0796"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2845" sboTerm="SBO:0000176" id="r_2845" name="phosphatidylinositol 4-kinase (1-16:1, 2-16:1), nucleus" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YNL267W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2845"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3378" stoichiometry="1" constant="true"/> <speciesReference species="s_0438" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0398" stoichiometry="1" constant="true"/> <speciesReference species="s_0800" stoichiometry="1" constant="true"/> <speciesReference species="s_3379" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0796"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2846" sboTerm="SBO:0000176" id="r_2846" name="phosphatidylinositol 4-kinase (1-18:0, 2-16:1), nucleus" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YNL267W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2846"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3380" stoichiometry="1" constant="true"/> <speciesReference species="s_0438" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0398" stoichiometry="1" constant="true"/> <speciesReference species="s_0800" stoichiometry="1" constant="true"/> <speciesReference species="s_3381" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0796"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2847" sboTerm="SBO:0000176" id="r_2847" name="phosphatidylinositol 4-kinase (1-18:1, 2-16:1), nucleus" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YNL267W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2847"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3382" stoichiometry="1" constant="true"/> <speciesReference species="s_0438" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0398" stoichiometry="1" constant="true"/> <speciesReference species="s_0800" stoichiometry="1" constant="true"/> <speciesReference species="s_3383" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0796"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2848" sboTerm="SBO:0000176" id="r_2848" name="phosphatidylinositol 4-kinase (1-16:0, 2-18:1), nucleus" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YNL267W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2848"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3384" stoichiometry="1" constant="true"/> <speciesReference species="s_0438" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0398" stoichiometry="1" constant="true"/> <speciesReference species="s_0800" stoichiometry="1" constant="true"/> <speciesReference species="s_3385" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0796"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2849" sboTerm="SBO:0000176" id="r_2849" name="phosphatidylinositol 4-kinase (1-16:1, 2-18:1), nucleus" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YNL267W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2849"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li 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</notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2851"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3390" stoichiometry="1" constant="true"/> <speciesReference species="s_0438" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0398" stoichiometry="1" constant="true"/> <speciesReference species="s_0800" stoichiometry="1" constant="true"/> <speciesReference species="s_3391" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0796"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2852" sboTerm="SBO:0000176" id="r_2852" name="phosphatidylinositol 3-kinase (1-16:0, 2-16:1), vacuolar membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YLR240W AND YBR097W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2852"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3340" stoichiometry="1" constant="true"/> <speciesReference species="s_3341" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3342" stoichiometry="1" constant="true"/> <speciesReference species="s_3164" stoichiometry="1" constant="true"/> <speciesReference species="s_3392" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0665"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1033"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2853" sboTerm="SBO:0000176" id="r_2853" name="phosphatidylinositol 3-kinase (1-16:1, 2-16:1), vacuolar membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YLR240W AND YBR097W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2853"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3344" stoichiometry="1" constant="true"/> <speciesReference species="s_3341" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3342" stoichiometry="1" constant="true"/> <speciesReference species="s_3164" stoichiometry="1" constant="true"/> <speciesReference species="s_3393" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0665"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1033"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2854" sboTerm="SBO:0000176" id="r_2854" name="phosphatidylinositol 3-kinase (1-18:0, 2-16:1), vacuolar membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YLR240W AND YBR097W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2854"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3346" stoichiometry="1" constant="true"/> <speciesReference species="s_3341" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3342" stoichiometry="1" constant="true"/> <speciesReference species="s_3164" stoichiometry="1" constant="true"/> <speciesReference 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</bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3352" stoichiometry="1" constant="true"/> <speciesReference species="s_3341" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3342" stoichiometry="1" constant="true"/> <speciesReference species="s_3164" stoichiometry="1" constant="true"/> <speciesReference species="s_3397" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0665"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1033"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2858" sboTerm="SBO:0000176" id="r_2858" name="phosphatidylinositol 3-kinase (1-18:0, 2-18:1), vacuolar membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YLR240W AND YBR097W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2858"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3354" stoichiometry="1" constant="true"/> <speciesReference species="s_3341" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3342" stoichiometry="1" constant="true"/> <speciesReference species="s_3164" stoichiometry="1" constant="true"/> <speciesReference species="s_3398" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0665"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1033"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2859" sboTerm="SBO:0000176" id="r_2859" name="phosphatidylinositol 3-kinase (1-18:1, 2-18:1), vacuolar membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YLR240W AND YBR097W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2859"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3356" stoichiometry="1" constant="true"/> <speciesReference species="s_3341" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3342" stoichiometry="1" constant="true"/> <speciesReference species="s_3164" stoichiometry="1" constant="true"/> <speciesReference species="s_3399" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0665"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1033"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2860" sboTerm="SBO:0000176" id="r_2860" name="PI 4-P 5-kinase (1-16:0, 2-16:1), nucleus" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDR208W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2860"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3377" stoichiometry="1" constant="true"/> <speciesReference species="s_0438" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0398" stoichiometry="1" constant="true"/> <speciesReference species="s_0800" stoichiometry="1" constant="true"/> <speciesReference species="s_3400" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0193"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2861" sboTerm="SBO:0000176" id="r_2861" name="PI 4-P 5-kinase (1-16:1, 2-16:1), nucleus" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDR208W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2861"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3379" stoichiometry="1" constant="true"/> <speciesReference species="s_0438" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0398" stoichiometry="1" constant="true"/> <speciesReference species="s_0800" stoichiometry="1" constant="true"/> <speciesReference species="s_3401" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0193"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2862" sboTerm="SBO:0000176" id="r_2862" name="PI 4-P 5-kinase (1-18:0, 2-16:1), nucleus" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDR208W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2862"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3381" stoichiometry="1" constant="true"/> <speciesReference species="s_0438" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0398" stoichiometry="1" constant="true"/> <speciesReference species="s_0800" stoichiometry="1" constant="true"/> <speciesReference species="s_3402" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0193"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2863" sboTerm="SBO:0000176" id="r_2863" name="PI 4-P 5-kinase (1-18:1, 2-16:1), nucleus" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDR208W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2863"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3383" stoichiometry="1" constant="true"/> <speciesReference species="s_0438" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0398" stoichiometry="1" constant="true"/> <speciesReference species="s_0800" stoichiometry="1" constant="true"/> <speciesReference species="s_3403" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0193"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2864" sboTerm="SBO:0000176" id="r_2864" name="PI 4-P 5-kinase (1-16:0, 2-18:1), nucleus" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDR208W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2864"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3385" stoichiometry="1" constant="true"/> <speciesReference species="s_0438" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0398" stoichiometry="1" constant="true"/> <speciesReference species="s_0800" stoichiometry="1" constant="true"/> <speciesReference species="s_3404" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0193"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2865" sboTerm="SBO:0000176" id="r_2865" name="PI 4-P 5-kinase (1-16:1, 2-18:1), nucleus" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDR208W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2865"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3387" stoichiometry="1" constant="true"/> <speciesReference species="s_0438" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0398" stoichiometry="1" constant="true"/> <speciesReference species="s_0800" stoichiometry="1" constant="true"/> <speciesReference species="s_3405" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0193"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2866" sboTerm="SBO:0000176" id="r_2866" name="PI 4-P 5-kinase (1-18:0, 2-18:1), nucleus" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDR208W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2866"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3389" stoichiometry="1" constant="true"/> <speciesReference species="s_0438" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0398" stoichiometry="1" constant="true"/> <speciesReference species="s_0800" stoichiometry="1" constant="true"/> <speciesReference species="s_3406" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0193"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2867" sboTerm="SBO:0000176" id="r_2867" name="PI 4-P 5-kinase (1-18:1, 2-18:1), nucleus" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDR208W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2867"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3391" stoichiometry="1" constant="true"/> <speciesReference species="s_0438" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0398" stoichiometry="1" constant="true"/> <speciesReference species="s_0800" stoichiometry="1" constant="true"/> <speciesReference species="s_3407" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0193"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2868" sboTerm="SBO:0000176" id="r_2868" name="PI 4-P 5-kinase (1-16:0, 2-16:1), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDR208W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2868"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3325" stoichiometry="1" constant="true"/> <speciesReference species="s_2856" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3324" stoichiometry="1" constant="true"/> <speciesReference species="s_0793" stoichiometry="1" constant="true"/> <speciesReference species="s_3408" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0192"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2869" sboTerm="SBO:0000176" id="r_2869" name="PI 4-P 5-kinase (1-16:1, 2-16:1), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDR208W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2869"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3327" stoichiometry="1" constant="true"/> <speciesReference species="s_2856" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3324" stoichiometry="1" constant="true"/> <speciesReference species="s_0793" stoichiometry="1" constant="true"/> <speciesReference species="s_3409" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0192"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2870" sboTerm="SBO:0000176" id="r_2870" name="PI 4-P 5-kinase (1-18:0, 2-16:1), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDR208W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2870"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3329" stoichiometry="1" constant="true"/> <speciesReference species="s_2856" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3324" stoichiometry="1" constant="true"/> <speciesReference species="s_0793" stoichiometry="1" constant="true"/> <speciesReference species="s_3410" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0192"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2871" sboTerm="SBO:0000176" id="r_2871" name="PI 4-P 5-kinase (1-18:1, 2-16:1), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDR208W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2871"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3331" stoichiometry="1" constant="true"/> <speciesReference species="s_2856" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3324" stoichiometry="1" constant="true"/> <speciesReference species="s_0793" stoichiometry="1" constant="true"/> <speciesReference species="s_3411" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0192"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2872" sboTerm="SBO:0000176" id="r_2872" name="PI 4-P 5-kinase (1-16:0, 2-18:1), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDR208W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2872"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference 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</annotation> <listOfReactants> <speciesReference species="s_3335" stoichiometry="1" constant="true"/> <speciesReference species="s_2856" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3324" stoichiometry="1" constant="true"/> <speciesReference species="s_0793" stoichiometry="1" constant="true"/> <speciesReference species="s_3413" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0192"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2874" sboTerm="SBO:0000176" id="r_2874" name="PI 4-P 5-kinase (1-18:0, 2-18:1), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDR208W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2874"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3337" stoichiometry="1" constant="true"/> <speciesReference species="s_2856" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3324" stoichiometry="1" constant="true"/> <speciesReference species="s_0793" stoichiometry="1" constant="true"/> <speciesReference species="s_3414" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0192"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2875" sboTerm="SBO:0000176" id="r_2875" name="PI 4-P 5-kinase (1-18:1, 2-18:1), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDR208W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2875"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li 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<bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3392" stoichiometry="1" constant="true"/> <speciesReference species="s_3341" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3342" stoichiometry="1" constant="true"/> <speciesReference species="s_3164" stoichiometry="1" constant="true"/> <speciesReference species="s_3416" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1034"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2877" sboTerm="SBO:0000176" id="r_2877" name="PI 3-P 5-kinase (1-16:1, 2-16:1), vacuolar membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YFR019W</p> </body> </notes> <annotation> <rdf:RDF> 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<p>GENE_ASSOCIATION:YFR019W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_2878"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3394" stoichiometry="1" constant="true"/> <speciesReference species="s_3341" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3342" stoichiometry="1" constant="true"/> <speciesReference species="s_3164" stoichiometry="1" constant="true"/> <speciesReference species="s_3418" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1034"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_2879" sboTerm="SBO:0000176" id="r_2879" name="PI 3-P 5-kinase (1-18:1, 2-16:1), vacuolar membrane" reversible="true" fast="false"> <notes> 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<speciesReference species="s_3428" stoichiometry="1" constant="true"/> <speciesReference species="s_2808" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3447" stoichiometry="1" constant="true"/> <speciesReference species="s_2836" stoichiometry="1" constant="true"/> <speciesReference species="s_2783" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1036"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3031" sboTerm="SBO:0000176" id="r_3031" name="LPC phospholipase B (16:1), ER membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YML059C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3031"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3429" stoichiometry="1" constant="true"/> <speciesReference species="s_2808" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3447" stoichiometry="1" constant="true"/> <speciesReference species="s_2837" stoichiometry="1" constant="true"/> <speciesReference species="s_2783" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1036"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3032" sboTerm="SBO:0000176" id="r_3032" name="LPC phospholipase B (18:0), ER membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YML059C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3032"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3430" stoichiometry="1" constant="true"/> <speciesReference species="s_2808" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3447" stoichiometry="1" constant="true"/> <speciesReference species="s_2838" stoichiometry="1" constant="true"/> <speciesReference species="s_2783" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1036"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3033" sboTerm="SBO:0000176" id="r_3033" name="LPC phospholipase B (18:1), ER membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YML059C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3033"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3431" stoichiometry="1" constant="true"/> <speciesReference species="s_2808" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3447" stoichiometry="1" constant="true"/> <speciesReference species="s_2839" stoichiometry="1" constant="true"/> <speciesReference species="s_2783" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1036"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3034" sboTerm="SBO:0000176" id="r_3034" name="PC phospholipase B (1-16:0, 2-16:1), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YMR008C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3034"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3448" stoichiometry="1" constant="true"/> <speciesReference species="s_3449" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3450" stoichiometry="1" constant="true"/> <speciesReference species="s_3451" stoichiometry="1" constant="true"/> <speciesReference species="s_0793" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0720"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3035" sboTerm="SBO:0000176" id="r_3035" name="PC phospholipase B (1-16:1, 2-16:1), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YMR008C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3035"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3452" stoichiometry="1" constant="true"/> <speciesReference species="s_3449" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3453" stoichiometry="1" constant="true"/> <speciesReference species="s_3451" stoichiometry="1" constant="true"/> <speciesReference species="s_0793" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0720"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3036" sboTerm="SBO:0000176" id="r_3036" name="PC phospholipase B (1-18:0, 2-16:1), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YMR008C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3036"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3454" stoichiometry="1" constant="true"/> <speciesReference species="s_3449" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3455" stoichiometry="1" constant="true"/> <speciesReference species="s_3451" stoichiometry="1" constant="true"/> <speciesReference species="s_0793" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0720"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3037" sboTerm="SBO:0000176" id="r_3037" name="PC phospholipase B (1-18:1, 2-16:1), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YMR008C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3037"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3456" stoichiometry="1" constant="true"/> <speciesReference species="s_3449" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3457" stoichiometry="1" constant="true"/> <speciesReference species="s_3451" stoichiometry="1" constant="true"/> <speciesReference species="s_0793" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0720"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3038" sboTerm="SBO:0000176" id="r_3038" name="PC phospholipase B (1-16:0, 2-18:1), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YMR008C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3038"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3458" stoichiometry="1" constant="true"/> <speciesReference species="s_3449" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3450" stoichiometry="1" constant="true"/> <speciesReference species="s_3459" stoichiometry="1" constant="true"/> <speciesReference species="s_0793" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0720"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3039" sboTerm="SBO:0000176" id="r_3039" name="PC phospholipase B (1-16:1, 2-18:1), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YMR008C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3039"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3460" stoichiometry="1" constant="true"/> <speciesReference species="s_3449" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3453" stoichiometry="1" constant="true"/> <speciesReference species="s_3459" stoichiometry="1" constant="true"/> <speciesReference species="s_0793" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0720"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3040" sboTerm="SBO:0000176" id="r_3040" name="PC phospholipase B (1-18:0, 2-18:1), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YMR008C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3040"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3461" stoichiometry="1" constant="true"/> <speciesReference species="s_3449" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3455" stoichiometry="1" constant="true"/> <speciesReference species="s_3459" stoichiometry="1" constant="true"/> <speciesReference species="s_0793" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0720"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3041" sboTerm="SBO:0000176" id="r_3041" name="PC phospholipase B (1-18:1, 2-18:1), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YMR008C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3041"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3462" stoichiometry="1" constant="true"/> <speciesReference species="s_3449" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3457" stoichiometry="1" constant="true"/> <speciesReference species="s_3459" stoichiometry="1" constant="true"/> <speciesReference species="s_0793" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0720"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3042" sboTerm="SBO:0000176" id="r_3042" name="LPC phospholipase B (16:0), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YMR008C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3042"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3450" stoichiometry="1" constant="true"/> <speciesReference species="s_3449" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1432" stoichiometry="1" constant="true"/> <speciesReference species="s_3463" stoichiometry="1" constant="true"/> <speciesReference species="s_0793" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0720"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3043" sboTerm="SBO:0000176" id="r_3043" name="LPC phospholipase B (16:1), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YMR008C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3043"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3453" stoichiometry="1" constant="true"/> <speciesReference species="s_3449" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1432" stoichiometry="1" constant="true"/> <speciesReference species="s_3451" stoichiometry="1" constant="true"/> <speciesReference species="s_0793" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0720"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3044" sboTerm="SBO:0000176" id="r_3044" name="LPC phospholipase B (18:0), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YMR008C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3044"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3455" stoichiometry="1" constant="true"/> <speciesReference species="s_3449" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1432" stoichiometry="1" constant="true"/> <speciesReference species="s_3464" stoichiometry="1" constant="true"/> <speciesReference species="s_0793" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0720"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3045" sboTerm="SBO:0000176" id="r_3045" name="LPC phospholipase B (18:1), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YMR008C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3045"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3457" stoichiometry="1" constant="true"/> <speciesReference species="s_3449" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1432" stoichiometry="1" constant="true"/> <speciesReference species="s_3459" stoichiometry="1" constant="true"/> <speciesReference species="s_0793" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0720"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3046" sboTerm="SBO:0000176" id="r_3046" name="PE phospholipase B (1-16:0, 2-16:1), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YMR008C OR YMR006C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3046"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3465" stoichiometry="1" constant="true"/> <speciesReference species="s_3449" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3466" stoichiometry="1" constant="true"/> <speciesReference species="s_3451" stoichiometry="1" constant="true"/> <speciesReference species="s_0793" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0720"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0718"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3047" sboTerm="SBO:0000176" id="r_3047" name="PE phospholipase B (1-16:1, 2-16:1), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YMR008C OR YMR006C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3047"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3467" stoichiometry="1" constant="true"/> <speciesReference species="s_3449" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3468" stoichiometry="1" constant="true"/> <speciesReference species="s_3451" stoichiometry="1" constant="true"/> <speciesReference species="s_0793" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0720"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0718"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3048" sboTerm="SBO:0000176" id="r_3048" name="PE phospholipase B (1-18:0, 2-16:1), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YMR008C OR YMR006C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3048"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3469" stoichiometry="1" constant="true"/> <speciesReference species="s_3449" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3470" stoichiometry="1" constant="true"/> <speciesReference species="s_3451" stoichiometry="1" constant="true"/> <speciesReference species="s_0793" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0720"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0718"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3049" sboTerm="SBO:0000176" id="r_3049" name="PE phospholipase B (1-18:1, 2-16:1), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YMR008C OR YMR006C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3049"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3471" stoichiometry="1" constant="true"/> <speciesReference species="s_3449" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3472" stoichiometry="1" constant="true"/> <speciesReference species="s_3451" stoichiometry="1" constant="true"/> <speciesReference species="s_0793" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0720"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0718"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3050" sboTerm="SBO:0000176" id="r_3050" name="PE phospholipase B (1-16:0, 2-18:1), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YMR008C OR YMR006C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3050"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3473" stoichiometry="1" constant="true"/> <speciesReference species="s_3449" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3466" stoichiometry="1" constant="true"/> <speciesReference species="s_3459" stoichiometry="1" constant="true"/> <speciesReference species="s_0793" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0720"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0718"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3051" sboTerm="SBO:0000176" id="r_3051" name="PE phospholipase B (1-16:1, 2-18:1), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YMR008C OR YMR006C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3051"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3474" stoichiometry="1" constant="true"/> <speciesReference species="s_3449" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3468" stoichiometry="1" constant="true"/> <speciesReference species="s_3459" stoichiometry="1" constant="true"/> <speciesReference species="s_0793" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0720"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0718"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3052" sboTerm="SBO:0000176" id="r_3052" name="PE phospholipase B (1-18:0, 2-18:1), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YMR008C OR YMR006C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3052"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3475" stoichiometry="1" constant="true"/> <speciesReference species="s_3449" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3470" stoichiometry="1" constant="true"/> <speciesReference species="s_3459" stoichiometry="1" constant="true"/> <speciesReference species="s_0793" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0720"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0718"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3053" sboTerm="SBO:0000176" id="r_3053" name="PE phospholipase B (1-18:1, 2-18:1), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YMR008C OR YMR006C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3053"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3476" stoichiometry="1" constant="true"/> <speciesReference species="s_3449" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3472" stoichiometry="1" constant="true"/> <speciesReference species="s_3459" stoichiometry="1" constant="true"/> <speciesReference species="s_0793" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0720"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0718"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3054" sboTerm="SBO:0000176" id="r_3054" name="LPE phospholipase B (16:0), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YMR008C OR YMR006C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3054"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3466" stoichiometry="1" constant="true"/> <speciesReference species="s_3449" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3477" stoichiometry="1" constant="true"/> <speciesReference species="s_3463" stoichiometry="1" constant="true"/> <speciesReference species="s_0793" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0720"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0718"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3055" sboTerm="SBO:0000176" id="r_3055" name="LPE phospholipase B (16:1), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YMR008C OR YMR006C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3055"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3468" stoichiometry="1" constant="true"/> <speciesReference species="s_3449" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3477" stoichiometry="1" constant="true"/> <speciesReference species="s_3451" stoichiometry="1" constant="true"/> <speciesReference species="s_0793" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0720"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0718"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3056" sboTerm="SBO:0000176" id="r_3056" name="LPE phospholipase B (18:0), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YMR008C OR YMR006C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3056"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3470" stoichiometry="1" constant="true"/> <speciesReference species="s_3449" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3477" stoichiometry="1" constant="true"/> <speciesReference species="s_3464" stoichiometry="1" constant="true"/> <speciesReference species="s_0793" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0720"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0718"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3057" sboTerm="SBO:0000176" id="r_3057" name="LPE phospholipase B (18:1), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YMR008C OR YMR006C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3057"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3472" stoichiometry="1" constant="true"/> <speciesReference species="s_3449" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3477" stoichiometry="1" constant="true"/> <speciesReference species="s_3459" stoichiometry="1" constant="true"/> <speciesReference species="s_0793" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0720"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0718"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3058" sboTerm="SBO:0000176" id="r_3058" name="PS phospholipase B (1-16:0, 2-16:1), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YMR006C OR YOL011W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3058"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3478" stoichiometry="1" constant="true"/> <speciesReference species="s_3449" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3479" stoichiometry="1" constant="true"/> <speciesReference species="s_3451" stoichiometry="1" constant="true"/> <speciesReference species="s_0793" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0718"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0819"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3059" sboTerm="SBO:0000176" id="r_3059" name="PS phospholipase B (1-16:1, 2-16:1), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YMR006C OR YOL011W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3059"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3480" stoichiometry="1" constant="true"/> <speciesReference species="s_3449" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3481" stoichiometry="1" constant="true"/> <speciesReference species="s_3451" stoichiometry="1" constant="true"/> <speciesReference species="s_0793" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0718"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0819"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3060" sboTerm="SBO:0000176" id="r_3060" name="PS phospholipase B (1-18:0, 2-16:1), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YMR006C OR YOL011W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3060"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3482" stoichiometry="1" constant="true"/> <speciesReference species="s_3449" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3483" stoichiometry="1" constant="true"/> <speciesReference species="s_3451" stoichiometry="1" constant="true"/> <speciesReference species="s_0793" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0718"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0819"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3061" sboTerm="SBO:0000176" id="r_3061" name="PS phospholipase B (1-18:1, 2-16:1), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YMR006C OR YOL011W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3061"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3484" stoichiometry="1" constant="true"/> <speciesReference species="s_3449" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3485" stoichiometry="1" constant="true"/> <speciesReference species="s_3451" stoichiometry="1" constant="true"/> <speciesReference species="s_0793" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0718"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0819"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3062" sboTerm="SBO:0000176" id="r_3062" name="PS phospholipase B (1-16:0, 2-18:1), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YMR006C OR YOL011W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3062"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3486" stoichiometry="1" constant="true"/> <speciesReference species="s_3449" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3479" stoichiometry="1" constant="true"/> <speciesReference species="s_3459" stoichiometry="1" constant="true"/> <speciesReference species="s_0793" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0718"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0819"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3063" sboTerm="SBO:0000176" id="r_3063" name="PS phospholipase B (1-16:1, 2-18:1), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YMR006C OR YOL011W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3063"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3487" stoichiometry="1" constant="true"/> <speciesReference species="s_3449" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3481" stoichiometry="1" constant="true"/> <speciesReference species="s_3459" stoichiometry="1" constant="true"/> <speciesReference species="s_0793" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0718"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0819"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3064" sboTerm="SBO:0000176" id="r_3064" name="PS phospholipase B (1-18:0, 2-18:1), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YMR006C OR YOL011W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3064"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3488" stoichiometry="1" constant="true"/> <speciesReference species="s_3449" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3483" stoichiometry="1" constant="true"/> <speciesReference species="s_3459" stoichiometry="1" constant="true"/> <speciesReference species="s_0793" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0718"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0819"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3065" sboTerm="SBO:0000176" id="r_3065" name="PS phospholipase B (1-18:1, 2-18:1), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YMR006C OR YOL011W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3065"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3489" stoichiometry="1" constant="true"/> <speciesReference species="s_3449" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3485" stoichiometry="1" constant="true"/> <speciesReference species="s_3459" stoichiometry="1" constant="true"/> <speciesReference species="s_0793" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0718"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0819"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3066" sboTerm="SBO:0000176" id="r_3066" name="LPS phospholipase B (16:0), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YMR006C OR YOL011W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3066"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3479" stoichiometry="1" constant="true"/> <speciesReference species="s_3449" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3490" stoichiometry="1" constant="true"/> <speciesReference species="s_3463" stoichiometry="1" constant="true"/> <speciesReference species="s_0793" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0718"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0819"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3067" sboTerm="SBO:0000176" id="r_3067" name="LPS 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species="e_0819"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3068" sboTerm="SBO:0000176" id="r_3068" name="LPS phospholipase B (18:0), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YMR006C OR YOL011W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3068"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3483" stoichiometry="1" constant="true"/> <speciesReference species="s_3449" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3490" stoichiometry="1" constant="true"/> <speciesReference species="s_3464" stoichiometry="1" constant="true"/> <speciesReference species="s_0793" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> 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<speciesReference species="s_3491" stoichiometry="1" constant="true"/> <speciesReference species="s_3451" stoichiometry="1" constant="true"/> <speciesReference species="s_0793" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0819"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3071" sboTerm="SBO:0000176" id="r_3071" name="PI phospholipase B (1-16:1, 2-16:1), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YOL011W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3071"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3326" stoichiometry="1" constant="true"/> <speciesReference species="s_3449" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3492" stoichiometry="1" constant="true"/> <speciesReference species="s_3451" stoichiometry="1" constant="true"/> <speciesReference species="s_0793" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0819"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3072" sboTerm="SBO:0000176" id="r_3072" name="PI phospholipase B (1-18:0, 2-16:1), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YOL011W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3072"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3328" stoichiometry="1" constant="true"/> <speciesReference species="s_3449" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3493" stoichiometry="1" constant="true"/> <speciesReference species="s_3451" stoichiometry="1" constant="true"/> <speciesReference species="s_0793" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0819"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3073" sboTerm="SBO:0000176" id="r_3073" name="PI phospholipase B (1-18:1, 2-16:1), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YOL011W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3073"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference 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stoichiometry="1" constant="true"/> <speciesReference species="s_0511" stoichiometry="1" constant="true"/> <speciesReference species="s_0793" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0599"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3109" sboTerm="SBO:0000176" id="r_3109" name="PC phospholipase D (1-16:1, 2-18:1), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YKR031C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3109"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3460" stoichiometry="1" constant="true"/> <speciesReference species="s_3449" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3532" stoichiometry="1" constant="true"/> <speciesReference species="s_0511" stoichiometry="1" constant="true"/> <speciesReference species="s_0793" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0599"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3110" sboTerm="SBO:0000176" id="r_3110" name="PC phospholipase D (1-18:0, 2-18:1), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YKR031C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3110"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3461" stoichiometry="1" constant="true"/> <speciesReference species="s_3449" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3533" stoichiometry="1" constant="true"/> <speciesReference species="s_0511" stoichiometry="1" constant="true"/> <speciesReference species="s_0793" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0599"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3111" sboTerm="SBO:0000176" id="r_3111" name="PC phospholipase D (1-18:1, 2-18:1), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YKR031C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3111"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3462" stoichiometry="1" constant="true"/> <speciesReference species="s_3449" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3534" stoichiometry="1" constant="true"/> <speciesReference species="s_0511" stoichiometry="1" constant="true"/> <speciesReference species="s_0793" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0599"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3112" sboTerm="SBO:0000176" id="r_3112" name="PI 3-P phosphatase (1-16:0, 2-16:1), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YNL106C OR YOR109W )</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3112"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3535" stoichiometry="1" constant="true"/> <speciesReference species="s_3449" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3323" stoichiometry="1" constant="true"/> <speciesReference species="s_3536" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0856"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0780"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3113" sboTerm="SBO:0000176" id="r_3113" name="PI 3-P phosphatase (1-16:1, 2-16:1), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YNL106C OR YOR109W )</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3113"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3537" stoichiometry="1" constant="true"/> <speciesReference species="s_3449" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3326" stoichiometry="1" constant="true"/> <speciesReference species="s_3536" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0856"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0780"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3114" sboTerm="SBO:0000176" id="r_3114" name="PI 3-P phosphatase (1-18:0, 2-16:1), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YNL106C OR YOR109W )</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3114"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3538" stoichiometry="1" constant="true"/> <speciesReference species="s_3449" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3328" stoichiometry="1" constant="true"/> <speciesReference species="s_3536" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0856"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0780"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3115" sboTerm="SBO:0000176" id="r_3115" name="PI 3-P phosphatase (1-18:1, 2-16:1), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YNL106C OR YOR109W )</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3115"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3539" stoichiometry="1" constant="true"/> <speciesReference species="s_3449" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3330" stoichiometry="1" constant="true"/> <speciesReference species="s_3536" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0856"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0780"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3116" sboTerm="SBO:0000176" id="r_3116" name="PI 3-P phosphatase (1-16:0, 2-18:1), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YNL106C OR YOR109W )</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3116"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3540" stoichiometry="1" constant="true"/> <speciesReference species="s_3449" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3332" stoichiometry="1" constant="true"/> <speciesReference species="s_3536" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0856"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0780"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3117" sboTerm="SBO:0000176" id="r_3117" name="PI 3-P phosphatase (1-16:1, 2-18:1), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YNL106C OR YOR109W )</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3117"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3541" stoichiometry="1" constant="true"/> <speciesReference species="s_3449" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3334" stoichiometry="1" constant="true"/> <speciesReference species="s_3536" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0856"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0780"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3118" sboTerm="SBO:0000176" id="r_3118" name="PI 3-P phosphatase (1-18:0, 2-18:1), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YNL106C OR YOR109W )</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3118"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3542" stoichiometry="1" constant="true"/> <speciesReference species="s_3449" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3336" stoichiometry="1" constant="true"/> <speciesReference species="s_3536" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0856"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0780"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3119" sboTerm="SBO:0000176" id="r_3119" name="PI 3-P phosphatase (1-18:1, 2-18:1), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YNL106C OR YOR109W )</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3119"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3543" stoichiometry="1" constant="true"/> <speciesReference species="s_3449" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3338" stoichiometry="1" constant="true"/> <speciesReference species="s_3536" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0856"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0780"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3120" sboTerm="SBO:0000176" id="r_3120" name="PI 3-P phosphatase (1-16:0, 2-16:1), cytoplasm" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YNL106C OR YOR109W OR YJR110W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3120"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3544" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3545" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0857"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0781"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0543"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3121" sboTerm="SBO:0000176" id="r_3121" name="PI 3-P phosphatase (1-16:1, 2-16:1), cytoplasm" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YNL106C OR YOR109W OR YJR110W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3121"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3546" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3547" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0857"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0781"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0543"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3122" sboTerm="SBO:0000176" id="r_3122" name="PI 3-P phosphatase (1-18:0, 2-16:1), cytoplasm" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YNL106C OR YOR109W OR YJR110W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3122"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3548" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3549" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0857"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0781"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0543"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3123" sboTerm="SBO:0000176" id="r_3123" name="PI 3-P phosphatase (1-18:1, 2-16:1), cytoplasm" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YNL106C OR YOR109W OR YJR110W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3123"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3550" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3551" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0857"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0781"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0543"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3124" sboTerm="SBO:0000176" id="r_3124" name="PI 3-P phosphatase (1-16:0, 2-18:1), cytoplasm" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YNL106C OR YOR109W OR YJR110W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3124"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3552" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3553" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0857"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0781"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0543"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3125" sboTerm="SBO:0000176" id="r_3125" name="PI 3-P phosphatase (1-16:1, 2-18:1), cytoplasm" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YNL106C OR YOR109W OR YJR110W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3125"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3554" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3555" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0857"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0781"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0543"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3126" sboTerm="SBO:0000176" id="r_3126" name="PI 3-P phosphatase (1-18:0, 2-18:1), cytoplasm" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YNL106C OR YOR109W OR YJR110W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3126"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3556" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3557" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0857"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0781"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0543"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3127" sboTerm="SBO:0000176" id="r_3127" name="PI 3-P 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species="e_0543"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3128" sboTerm="SBO:0000176" id="r_3128" name="PI 3-P phosphatase (1-16:0, 2-16:1), ER membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YKL212W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3128"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3560" stoichiometry="1" constant="true"/> <speciesReference species="s_2808" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3118" stoichiometry="1" constant="true"/> <speciesReference species="s_2966" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1039"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3129" sboTerm="SBO:0000176" id="r_3129" name="PI 3-P phosphatase (1-16:1, 2-16:1), ER membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YKL212W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3129"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3561" stoichiometry="1" constant="true"/> <speciesReference species="s_2808" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3119" stoichiometry="1" constant="true"/> <speciesReference species="s_2966" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1039"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3130" sboTerm="SBO:0000176" id="r_3130" name="PI 3-P phosphatase (1-18:0, 2-16:1), ER membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YKL212W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3130"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3562" stoichiometry="1" constant="true"/> <speciesReference species="s_2808" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3120" stoichiometry="1" constant="true"/> <speciesReference species="s_2966" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1039"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3131" sboTerm="SBO:0000176" id="r_3131" name="PI 3-P phosphatase (1-18:1, 2-16:1), ER membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YKL212W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3131"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3563" stoichiometry="1" constant="true"/> <speciesReference species="s_2808" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3121" stoichiometry="1" constant="true"/> <speciesReference species="s_2966" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1039"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3132" sboTerm="SBO:0000176" id="r_3132" name="PI 3-P phosphatase (1-16:0, 2-18:1), ER membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YKL212W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3132"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3564" stoichiometry="1" constant="true"/> <speciesReference species="s_2808" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3122" stoichiometry="1" constant="true"/> <speciesReference species="s_2966" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1039"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3133" sboTerm="SBO:0000176" id="r_3133" name="PI 3-P 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fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YKL212W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3135"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3567" stoichiometry="1" constant="true"/> <speciesReference species="s_2808" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3125" stoichiometry="1" constant="true"/> <speciesReference species="s_2966" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1039"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3136" sboTerm="SBO:0000176" id="r_3136" name="PI 3-P phosphatase (1-16:0, 2-16:1), Golgi membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YKL212W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3136"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3568" stoichiometry="1" constant="true"/> <speciesReference species="s_2994" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3358" stoichiometry="1" constant="true"/> <speciesReference species="s_2995" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1040"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3137" sboTerm="SBO:0000176" id="r_3137" name="PI 3-P phosphatase (1-16:1, 2-16:1), Golgi membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YKL212W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3137"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3569" stoichiometry="1" constant="true"/> <speciesReference species="s_2994" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3362" stoichiometry="1" constant="true"/> <speciesReference species="s_2995" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1040"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3138" sboTerm="SBO:0000176" id="r_3138" name="PI 3-P phosphatase (1-18:0, 2-16:1), Golgi membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YKL212W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3138"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3570" stoichiometry="1" constant="true"/> <speciesReference species="s_2994" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3364" stoichiometry="1" constant="true"/> <speciesReference species="s_2995" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1040"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3139" sboTerm="SBO:0000176" id="r_3139" name="PI 3-P phosphatase (1-18:1, 2-16:1), Golgi membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YKL212W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3139"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3571" stoichiometry="1" constant="true"/> <speciesReference species="s_2994" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3366" stoichiometry="1" constant="true"/> <speciesReference species="s_2995" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1040"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3140" sboTerm="SBO:0000176" id="r_3140" name="PI 3-P phosphatase (1-16:0, 2-18:1), Golgi membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YKL212W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3140"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3572" stoichiometry="1" constant="true"/> <speciesReference species="s_2994" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3368" stoichiometry="1" constant="true"/> <speciesReference species="s_2995" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1040"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3141" sboTerm="SBO:0000176" id="r_3141" name="PI 3-P phosphatase (1-16:1, 2-18:1), Golgi membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YKL212W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3141"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3573" stoichiometry="1" constant="true"/> <speciesReference species="s_2994" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3370" stoichiometry="1" constant="true"/> <speciesReference species="s_2995" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1040"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3142" sboTerm="SBO:0000176" id="r_3142" name="PI 3-P phosphatase (1-18:0, 2-18:1), Golgi membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YKL212W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3142"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3574" stoichiometry="1" constant="true"/> <speciesReference species="s_2994" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3372" stoichiometry="1" constant="true"/> <speciesReference species="s_2995" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1040"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3143" sboTerm="SBO:0000176" id="r_3143" name="PI 3-P phosphatase (1-18:1, 2-18:1), Golgi membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YKL212W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3143"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3575" stoichiometry="1" constant="true"/> <speciesReference species="s_2994" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3374" stoichiometry="1" constant="true"/> <speciesReference species="s_2995" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1040"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3144" sboTerm="SBO:0000176" id="r_3144" name="PI 4-P phosphatase (1-16:0, 2-16:1), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YNL106C OR YOR109W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3144"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3325" stoichiometry="1" constant="true"/> <speciesReference species="s_3449" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3323" stoichiometry="1" constant="true"/> <speciesReference species="s_3536" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0856"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0780"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3145" sboTerm="SBO:0000176" id="r_3145" name="PI 4-P phosphatase (1-16:1, 2-16:1), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YNL106C OR YOR109W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3145"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3327" stoichiometry="1" constant="true"/> <speciesReference species="s_3449" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3326" stoichiometry="1" constant="true"/> <speciesReference species="s_3536" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0856"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0780"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3146" sboTerm="SBO:0000176" id="r_3146" name="PI 4-P phosphatase (1-18:0, 2-16:1), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YNL106C OR YOR109W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3146"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3329" stoichiometry="1" constant="true"/> <speciesReference species="s_3449" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3328" stoichiometry="1" constant="true"/> <speciesReference species="s_3536" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0856"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0780"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3147" sboTerm="SBO:0000176" id="r_3147" name="PI 4-P phosphatase (1-18:1, 2-16:1), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YNL106C OR YOR109W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3147"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3331" stoichiometry="1" constant="true"/> <speciesReference species="s_3449" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3330" stoichiometry="1" constant="true"/> <speciesReference species="s_3536" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0856"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0780"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3148" sboTerm="SBO:0000176" id="r_3148" name="PI 4-P phosphatase (1-16:0, 2-18:1), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YNL106C OR YOR109W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3148"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3333" stoichiometry="1" constant="true"/> <speciesReference species="s_3449" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3332" stoichiometry="1" constant="true"/> <speciesReference species="s_3536" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0856"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0780"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3149" sboTerm="SBO:0000176" id="r_3149" name="PI 4-P phosphatase (1-16:1, 2-18:1), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YNL106C OR YOR109W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3149"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3335" stoichiometry="1" constant="true"/> <speciesReference species="s_3449" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3334" stoichiometry="1" constant="true"/> <speciesReference species="s_3536" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0856"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0780"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3150" sboTerm="SBO:0000176" id="r_3150" name="PI 4-P phosphatase (1-18:0, 2-18:1), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YNL106C OR YOR109W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3150"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3337" stoichiometry="1" constant="true"/> <speciesReference species="s_3449" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3336" stoichiometry="1" constant="true"/> <speciesReference species="s_3536" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0856"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0780"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3151" sboTerm="SBO:0000176" id="r_3151" name="PI 4-P phosphatase (1-18:1, 2-18:1), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YNL106C OR YOR109W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3151"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3339" stoichiometry="1" constant="true"/> <speciesReference species="s_3449" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3338" stoichiometry="1" constant="true"/> <speciesReference species="s_3536" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0856"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0780"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3152" sboTerm="SBO:0000176" id="r_3152" name="PI 4-P phosphatase (1-16:0, 2-16:1), cytoplasm" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YNL106C OR YOR109W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3152"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3576" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3545" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0857"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0781"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3153" sboTerm="SBO:0000176" id="r_3153" name="PI 4-P phosphatase (1-16:1, 2-16:1), cytoplasm" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YNL106C OR YOR109W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3153"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3577" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3547" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0857"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0781"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3154" sboTerm="SBO:0000176" id="r_3154" name="PI 4-P phosphatase (1-18:0, 2-16:1), cytoplasm" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YNL106C OR YOR109W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3154"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3578" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3549" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0857"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0781"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3155" sboTerm="SBO:0000176" id="r_3155" name="PI 4-P phosphatase (1-18:1, 2-16:1), cytoplasm" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YNL106C OR YOR109W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3155"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference 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</annotation> <listOfReactants> <speciesReference species="s_3580" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3553" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0857"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0781"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3157" sboTerm="SBO:0000176" id="r_3157" name="PI 4-P phosphatase (1-16:1, 2-18:1), cytoplasm" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YNL106C OR YOR109W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3157"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3581" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3555" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0857"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0781"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3158" sboTerm="SBO:0000176" id="r_3158" name="PI 4-P phosphatase (1-18:0, 2-18:1), cytoplasm" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YNL106C OR YOR109W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3158"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li 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<annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3160"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3584" stoichiometry="1" constant="true"/> <speciesReference species="s_2808" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3118" stoichiometry="1" constant="true"/> <speciesReference species="s_2966" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1039"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3161" sboTerm="SBO:0000176" id="r_3161" name="PI 4-P phosphatase (1-16:1, 2-16:1), ER membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YKL212W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3161"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3585" stoichiometry="1" constant="true"/> <speciesReference species="s_2808" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3119" stoichiometry="1" constant="true"/> <speciesReference species="s_2966" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1039"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3162" sboTerm="SBO:0000176" id="r_3162" name="PI 4-P phosphatase (1-18:0, 2-16:1), ER membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YKL212W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description 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<bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3587" stoichiometry="1" constant="true"/> <speciesReference species="s_2808" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3121" stoichiometry="1" constant="true"/> <speciesReference species="s_2966" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1039"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3164" sboTerm="SBO:0000176" id="r_3164" name="PI 4-P phosphatase (1-16:0, 2-18:1), ER membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YKL212W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3164"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3588" stoichiometry="1" constant="true"/> <speciesReference species="s_2808" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3122" stoichiometry="1" constant="true"/> <speciesReference species="s_2966" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1039"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3165" sboTerm="SBO:0000176" id="r_3165" name="PI 4-P phosphatase (1-16:1, 2-18:1), ER membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YKL212W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3165"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3589" stoichiometry="1" constant="true"/> <speciesReference species="s_2808" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3123" stoichiometry="1" constant="true"/> <speciesReference species="s_2966" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1039"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3166" sboTerm="SBO:0000176" id="r_3166" name="PI 4-P phosphatase (1-18:0, 2-18:1), ER membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YKL212W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3166"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li 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rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3591" stoichiometry="1" constant="true"/> <speciesReference species="s_2808" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3125" stoichiometry="1" constant="true"/> <speciesReference species="s_2966" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1039"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3168" sboTerm="SBO:0000176" id="r_3168" name="PI 4-P phosphatase (1-16:0, 2-16:1), Golgi membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YKL212W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3168"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li 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rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3363" stoichiometry="1" constant="true"/> <speciesReference species="s_2994" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3362" stoichiometry="1" constant="true"/> <speciesReference species="s_2995" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1040"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3170" sboTerm="SBO:0000176" id="r_3170" name="PI 4-P phosphatase (1-18:0, 2-16:1), Golgi membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YKL212W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3170"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3365" stoichiometry="1" constant="true"/> <speciesReference species="s_2994" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3364" stoichiometry="1" constant="true"/> <speciesReference species="s_2995" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1040"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3171" sboTerm="SBO:0000176" id="r_3171" name="PI 4-P phosphatase (1-18:1, 2-16:1), Golgi membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YKL212W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3171"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3367" stoichiometry="1" constant="true"/> <speciesReference species="s_2994" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3366" stoichiometry="1" constant="true"/> <speciesReference species="s_2995" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1040"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3172" sboTerm="SBO:0000176" id="r_3172" name="PI 4-P phosphatase (1-16:0, 2-18:1), Golgi membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YKL212W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3172"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3369" stoichiometry="1" constant="true"/> <speciesReference species="s_2994" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3368" stoichiometry="1" constant="true"/> <speciesReference species="s_2995" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1040"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3173" sboTerm="SBO:0000176" id="r_3173" name="PI 4-P phosphatase (1-16:1, 2-18:1), Golgi membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YKL212W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3173"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3371" stoichiometry="1" constant="true"/> <speciesReference species="s_2994" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3370" stoichiometry="1" constant="true"/> <speciesReference species="s_2995" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1040"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3174" sboTerm="SBO:0000176" id="r_3174" name="PI 4-P phosphatase (1-18:0, 2-18:1), Golgi membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YKL212W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3174"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3373" stoichiometry="1" constant="true"/> <speciesReference species="s_2994" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3372" stoichiometry="1" constant="true"/> <speciesReference species="s_2995" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1040"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3175" sboTerm="SBO:0000176" id="r_3175" name="PI 4-P phosphatase (1-18:1, 2-18:1), Golgi membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YKL212W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3175"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3375" stoichiometry="1" constant="true"/> <speciesReference species="s_2994" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3374" stoichiometry="1" constant="true"/> <speciesReference species="s_2995" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1040"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3176" sboTerm="SBO:0000176" id="r_3176" name="PI 3,5-P2 phosphatase (1-16:0, 2-16:1), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YNL106C OR YOR109W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3176"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3592" stoichiometry="1" constant="true"/> <speciesReference species="s_3449" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3535" stoichiometry="1" constant="true"/> <speciesReference species="s_3536" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0856"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0780"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3177" sboTerm="SBO:0000176" id="r_3177" name="PI 3,5-P2 phosphatase (1-16:1, 2-16:1), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YNL106C OR YOR109W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3177"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3593" stoichiometry="1" constant="true"/> <speciesReference species="s_3449" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3537" stoichiometry="1" constant="true"/> <speciesReference species="s_3536" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0856"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0780"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3178" sboTerm="SBO:0000176" id="r_3178" name="PI 3,5-P2 phosphatase (1-18:0, 2-16:1), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YNL106C OR YOR109W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3178"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3594" stoichiometry="1" constant="true"/> <speciesReference species="s_3449" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3538" stoichiometry="1" constant="true"/> <speciesReference species="s_3536" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0856"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0780"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3179" sboTerm="SBO:0000176" id="r_3179" name="PI 3,5-P2 phosphatase (1-18:1, 2-16:1), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YNL106C OR YOR109W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3179"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3595" stoichiometry="1" constant="true"/> <speciesReference species="s_3449" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3539" stoichiometry="1" constant="true"/> <speciesReference species="s_3536" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0856"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0780"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3180" sboTerm="SBO:0000176" id="r_3180" name="PI 3,5-P2 phosphatase (1-16:0, 2-18:1), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YNL106C OR YOR109W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3180"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3596" stoichiometry="1" constant="true"/> <speciesReference species="s_3449" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3540" stoichiometry="1" constant="true"/> <speciesReference species="s_3536" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0856"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0780"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3181" sboTerm="SBO:0000176" id="r_3181" name="PI 3,5-P2 phosphatase (1-16:1, 2-18:1), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YNL106C OR YOR109W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3181"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3597" stoichiometry="1" constant="true"/> <speciesReference species="s_3449" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3541" stoichiometry="1" constant="true"/> <speciesReference species="s_3536" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0856"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0780"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3182" sboTerm="SBO:0000176" id="r_3182" name="PI 3,5-P2 phosphatase (1-18:0, 2-18:1), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YNL106C OR YOR109W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3182"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3598" stoichiometry="1" constant="true"/> <speciesReference species="s_3449" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3542" stoichiometry="1" constant="true"/> <speciesReference species="s_3536" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0856"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0780"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3183" sboTerm="SBO:0000176" id="r_3183" name="PI 3,5-P2 phosphatase (1-18:1, 2-18:1), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YNL106C OR YOR109W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3183"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3599" stoichiometry="1" constant="true"/> <speciesReference species="s_3449" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3543" stoichiometry="1" constant="true"/> <speciesReference species="s_3536" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0856"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0780"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3184" sboTerm="SBO:0000176" id="r_3184" name="PI 3,5-P2 phosphatase (1-16:0, 2-16:1), cytoplasm" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YNL106C OR YOR109W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3184"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3600" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3544" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0857"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0781"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3185" sboTerm="SBO:0000176" id="r_3185" name="PI 3,5-P2 phosphatase (1-16:1, 2-16:1), cytoplasm" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YNL106C OR YOR109W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3185"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3601" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3546" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0857"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0781"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3186" sboTerm="SBO:0000176" id="r_3186" name="PI 3,5-P2 phosphatase (1-18:0, 2-16:1), cytoplasm" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YNL106C OR YOR109W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3186"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3602" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3548" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0857"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0781"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3187" sboTerm="SBO:0000176" id="r_3187" name="PI 3,5-P2 phosphatase (1-18:1, 2-16:1), cytoplasm" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YNL106C OR YOR109W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3187"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3603" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3550" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0857"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0781"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3188" sboTerm="SBO:0000176" id="r_3188" name="PI 3,5-P2 phosphatase (1-16:0, 2-18:1), cytoplasm" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YNL106C OR YOR109W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3188"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3604" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3552" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0857"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0781"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3189" sboTerm="SBO:0000176" id="r_3189" name="PI 3,5-P2 phosphatase (1-16:1, 2-18:1), cytoplasm" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YNL106C OR YOR109W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3189"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3605" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3554" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0857"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0781"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3190" sboTerm="SBO:0000176" id="r_3190" name="PI 3,5-P2 phosphatase (1-18:0, 2-18:1), cytoplasm" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YNL106C OR YOR109W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3190"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3606" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3556" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0857"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0781"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3191" sboTerm="SBO:0000176" id="r_3191" name="PI 3,5-P2 phosphatase (1-18:1, 2-18:1), cytoplasm" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YNL106C OR YOR109W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3191"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3607" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3558" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0857"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0781"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3192" sboTerm="SBO:0000176" id="r_3192" name="PI 4,5-P2 phosphatase (1-16:0, 2-16:1), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YNL106C OR YOR109W OR YIL002C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3192"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3408" stoichiometry="1" constant="true"/> <speciesReference species="s_3449" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3325" stoichiometry="1" constant="true"/> <speciesReference species="s_3536" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0459"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0856"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0780"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3193" sboTerm="SBO:0000176" id="r_3193" name="PI 4,5-P2 phosphatase (1-16:1, 2-16:1), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YNL106C OR YOR109W OR YIL002C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3193"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3409" stoichiometry="1" constant="true"/> <speciesReference species="s_3449" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3327" stoichiometry="1" constant="true"/> <speciesReference species="s_3536" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0459"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0856"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0780"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3194" sboTerm="SBO:0000176" id="r_3194" name="PI 4,5-P2 phosphatase (1-18:0, 2-16:1), cell 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</listOfModifiers> </reaction> <reaction metaid="meta_r_3195" sboTerm="SBO:0000176" id="r_3195" name="PI 4,5-P2 phosphatase (1-18:1, 2-16:1), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YNL106C OR YOR109W OR YIL002C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3195"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3411" stoichiometry="1" constant="true"/> <speciesReference species="s_3449" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3331" stoichiometry="1" constant="true"/> <speciesReference species="s_3536" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0459"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0856"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0780"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3196" sboTerm="SBO:0000176" id="r_3196" name="PI 4,5-P2 phosphatase (1-16:0, 2-18:1), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YNL106C OR YOR109W OR YIL002C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3196"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3412" stoichiometry="1" constant="true"/> <speciesReference species="s_3449" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3333" stoichiometry="1" constant="true"/> <speciesReference species="s_3536" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0459"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0856"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0780"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3197" sboTerm="SBO:0000176" id="r_3197" name="PI 4,5-P2 phosphatase (1-16:1, 2-18:1), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YNL106C OR YOR109W OR YIL002C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3197"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3413" stoichiometry="1" constant="true"/> <speciesReference species="s_3449" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3335" stoichiometry="1" constant="true"/> <speciesReference species="s_3536" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0459"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0856"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0780"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3198" sboTerm="SBO:0000176" id="r_3198" name="PI 4,5-P2 phosphatase (1-18:0, 2-18:1), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YNL106C OR YOR109W OR YIL002C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3198"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3414" stoichiometry="1" constant="true"/> <speciesReference species="s_3449" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3337" stoichiometry="1" constant="true"/> <speciesReference species="s_3536" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0459"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0856"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0780"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3199" sboTerm="SBO:0000176" id="r_3199" name="PI 4,5-P2 phosphatase (1-18:1, 2-18:1), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YNL106C OR YOR109W OR YIL002C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3199"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3415" stoichiometry="1" constant="true"/> <speciesReference species="s_3449" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3339" stoichiometry="1" constant="true"/> <speciesReference species="s_3536" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0459"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0856"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0780"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3200" sboTerm="SBO:0000176" id="r_3200" name="PI 4,5-P2 phosphatase (1-16:0, 2-16:1), cytoplasm" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YNL106C OR YOR109W OR YIL002C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3200"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3496" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3576" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0460"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0857"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0781"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3201" sboTerm="SBO:0000176" id="r_3201" name="PI 4,5-P2 phosphatase (1-16:1, 2-16:1), cytoplasm" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YNL106C OR YOR109W OR YIL002C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3201"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3499" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3577" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0460"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0857"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0781"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3202" sboTerm="SBO:0000176" id="r_3202" name="PI 4,5-P2 phosphatase (1-18:0, 2-16:1), cytoplasm" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YNL106C OR YOR109W OR YIL002C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3202"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3501" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3578" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0460"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0857"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0781"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3203" sboTerm="SBO:0000176" id="r_3203" name="PI 4,5-P2 phosphatase (1-18:1, 2-16:1), cytoplasm" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YNL106C OR YOR109W OR YIL002C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3203"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3503" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3579" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0460"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0857"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0781"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3204" sboTerm="SBO:0000176" id="r_3204" name="PI 4,5-P2 phosphatase (1-16:0, 2-18:1), cytoplasm" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YNL106C OR YOR109W OR YIL002C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3204"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3505" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3580" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0460"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0857"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0781"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3205" sboTerm="SBO:0000176" id="r_3205" name="PI 4,5-P2 phosphatase (1-16:1, 2-18:1), cytoplasm" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YNL106C OR YOR109W OR YIL002C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3205"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3507" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3581" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0460"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0857"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0781"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3206" sboTerm="SBO:0000176" id="r_3206" name="PI 4,5-P2 phosphatase (1-18:0, 2-18:1), cytoplasm" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YNL106C OR YOR109W OR YIL002C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3206"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3509" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3582" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0460"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0857"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0781"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3207" sboTerm="SBO:0000176" id="r_3207" name="PI 4,5-P2 phosphatase (1-18:1, 2-18:1), cytoplasm" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YNL106C OR YOR109W OR YIL002C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3207"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3511" stoichiometry="1" constant="true"/> <speciesReference species="s_0803" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3583" stoichiometry="1" constant="true"/> <speciesReference species="s_1322" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0460"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0857"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0781"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3208" sboTerm="SBO:0000176" id="r_3208" name="PI 4,5-P2 phosphatase (1-16:0, 2-16:1), ER membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YOL065C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3208"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3608" stoichiometry="1" constant="true"/> <speciesReference species="s_2808" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3584" stoichiometry="1" constant="true"/> <speciesReference species="s_2966" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1041"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3209" sboTerm="SBO:0000176" id="r_3209" name="PI 4,5-P2 phosphatase (1-16:1, 2-16:1), ER membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YOL065C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3209"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3609" stoichiometry="1" constant="true"/> <speciesReference species="s_2808" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3585" stoichiometry="1" constant="true"/> <speciesReference species="s_2966" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1041"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3210" sboTerm="SBO:0000176" id="r_3210" name="PI 4,5-P2 phosphatase (1-18:0, 2-16:1), ER membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YOL065C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3210"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3610" stoichiometry="1" constant="true"/> <speciesReference species="s_2808" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3586" stoichiometry="1" constant="true"/> <speciesReference species="s_2966" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1041"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3211" sboTerm="SBO:0000176" id="r_3211" name="PI 4,5-P2 phosphatase (1-18:1, 2-16:1), ER membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YOL065C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3211"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3611" stoichiometry="1" constant="true"/> <speciesReference species="s_2808" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3587" stoichiometry="1" constant="true"/> <speciesReference species="s_2966" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1041"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3212" sboTerm="SBO:0000176" id="r_3212" name="PI 4,5-P2 phosphatase (1-16:0, 2-18:1), ER membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YOL065C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3212"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3612" stoichiometry="1" constant="true"/> <speciesReference species="s_2808" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3588" stoichiometry="1" constant="true"/> <speciesReference species="s_2966" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1041"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3213" sboTerm="SBO:0000176" id="r_3213" name="PI 4,5-P2 phosphatase (1-16:1, 2-18:1), ER membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YOL065C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3213"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3613" stoichiometry="1" constant="true"/> <speciesReference species="s_2808" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3589" stoichiometry="1" constant="true"/> <speciesReference species="s_2966" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1041"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3214" sboTerm="SBO:0000176" id="r_3214" name="PI 4,5-P2 phosphatase (1-18:0, 2-18:1), ER membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YOL065C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3214"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3614" stoichiometry="1" constant="true"/> <speciesReference species="s_2808" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3590" stoichiometry="1" constant="true"/> <speciesReference species="s_2966" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1041"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3215" sboTerm="SBO:0000176" id="r_3215" name="PI 4,5-P2 phosphatase (1-18:1, 2-18:1), ER membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YOL065C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3215"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3615" stoichiometry="1" constant="true"/> <speciesReference species="s_2808" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3591" stoichiometry="1" constant="true"/> <speciesReference species="s_2966" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1041"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3216" sboTerm="SBO:0000176" id="r_3216" name="PI 3,5-P2 phosphatase (1-16:0, 2-16:1), vacuolar membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YNL325C AND YLR386W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3216"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3416" stoichiometry="1" constant="true"/> <speciesReference species="s_2976" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3392" stoichiometry="1" constant="true"/> <speciesReference species="s_2977" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1042"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1043"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3217" sboTerm="SBO:0000176" id="r_3217" name="PI 3,5-P2 phosphatase (1-16:1, 2-16:1), vacuolar membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YNL325C AND YLR386W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3217"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3417" stoichiometry="1" constant="true"/> <speciesReference species="s_2976" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3393" stoichiometry="1" constant="true"/> <speciesReference species="s_2977" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1042"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1043"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3218" sboTerm="SBO:0000176" id="r_3218" name="PI 3,5-P2 phosphatase (1-18:0, 2-16:1), vacuolar membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YNL325C AND YLR386W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3218"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3418" stoichiometry="1" constant="true"/> <speciesReference species="s_2976" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3394" stoichiometry="1" constant="true"/> <speciesReference species="s_2977" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1042"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1043"/> </listOfModifiers> 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sboTerm="SBO:0000460" species="e_1043"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3220" sboTerm="SBO:0000176" id="r_3220" name="PI 3,5-P2 phosphatase (1-16:0, 2-18:1), vacuolar membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YNL325C AND YLR386W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3220"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3420" stoichiometry="1" constant="true"/> <speciesReference species="s_2976" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3396" stoichiometry="1" constant="true"/> <speciesReference species="s_2977" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1042"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1043"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3221" sboTerm="SBO:0000176" id="r_3221" name="PI 3,5-P2 phosphatase (1-16:1, 2-18:1), vacuolar membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YNL325C AND YLR386W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3221"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3421" stoichiometry="1" constant="true"/> <speciesReference species="s_2976" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3397" stoichiometry="1" constant="true"/> <speciesReference species="s_2977" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1042"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1043"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3222" sboTerm="SBO:0000176" id="r_3222" name="PI 3,5-P2 phosphatase (1-18:0, 2-18:1), vacuolar membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YNL325C AND YLR386W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3222"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3422" stoichiometry="1" constant="true"/> <speciesReference species="s_2976" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3398" stoichiometry="1" constant="true"/> <speciesReference species="s_2977" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1042"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1043"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3223" sboTerm="SBO:0000176" id="r_3223" name="PI 3,5-P2 phosphatase (1-18:1, 2-18:1), vacuolar membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YNL325C AND YLR386W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3223"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3423" stoichiometry="1" constant="true"/> <speciesReference species="s_2976" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3399" stoichiometry="1" constant="true"/> <speciesReference species="s_2977" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1042"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1043"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3224" sboTerm="SBO:0000176" id="r_3224" name="DGPP phosphatase (1-16:0, 2-16:1), vacuolar membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDR284C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3224"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3616" stoichiometry="1" constant="true"/> <speciesReference species="s_2976" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2975" stoichiometry="1" constant="true"/> <speciesReference species="s_2977" stoichiometry="1" constant="true"/> <speciesReference species="s_3164" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1007"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3225" sboTerm="SBO:0000176" id="r_3225" name="DGPP phosphatase (1-16:1, 2-16:1), vacuolar membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDR284C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3225"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3617" stoichiometry="1" constant="true"/> <speciesReference species="s_2976" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_2981" stoichiometry="1" constant="true"/> <speciesReference species="s_2977" stoichiometry="1" constant="true"/> <speciesReference species="s_3164" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1007"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3226" sboTerm="SBO:0000176" id="r_3226" name="DGPP phosphatase (1-18:0, 2-16:1), vacuolar membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDR284C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3226"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference 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sboTerm="SBO:0000176" id="r_3246" name="lysoPA phosphatase (18:0), vacuolar membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDR284C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3246"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3644" stoichiometry="1" constant="true"/> <speciesReference species="s_2976" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3645" stoichiometry="1" constant="true"/> <speciesReference species="s_2977" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1007"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3247" sboTerm="SBO:0000176" id="r_3247" name="lysoPA phosphatase (18:1), vacuolar membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDR284C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3247"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3646" stoichiometry="1" constant="true"/> <speciesReference species="s_2976" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3647" stoichiometry="1" constant="true"/> <speciesReference species="s_2977" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1007"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3248" sboTerm="SBO:0000176" id="r_3248" name="lysoPA phosphatase (16:0), Golgi membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDR503C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3248"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3648" stoichiometry="1" constant="true"/> <speciesReference species="s_2994" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3649" stoichiometry="1" constant="true"/> <speciesReference species="s_2995" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1008"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3249" sboTerm="SBO:0000176" id="r_3249" name="lysoPA phosphatase (16:1), Golgi membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDR503C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3249"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3650" stoichiometry="1" constant="true"/> <speciesReference species="s_2994" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3651" stoichiometry="1" constant="true"/> <speciesReference species="s_2995" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1008"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3250" sboTerm="SBO:0000176" id="r_3250" name="lysoPA phosphatase (18:0), Golgi membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDR503C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3250"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3652" stoichiometry="1" constant="true"/> <speciesReference species="s_2994" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3653" stoichiometry="1" constant="true"/> <speciesReference species="s_2995" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1008"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3251" sboTerm="SBO:0000176" id="r_3251" name="lysoPA phosphatase (18:1), Golgi membrane" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YDR503C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3251"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3654" stoichiometry="1" constant="true"/> <speciesReference species="s_2994" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3655" stoichiometry="1" constant="true"/> <speciesReference species="s_2995" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1008"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3252" sboTerm="SBO:0000176" id="r_3252" name="ergosteryl ester hydrolase (16:1), lipid particle" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YKL140W OR YLL012W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3252"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/16835446"/> <rdf:li rdf:resource="http://identifiers.org/pubmed/14640980"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3656" stoichiometry="1" constant="true"/> <speciesReference species="s_3657" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0669" stoichiometry="1" constant="true"/> <speciesReference species="s_2848" stoichiometry="1" constant="true"/> <speciesReference species="s_0798" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0578"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0613"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3253" sboTerm="SBO:0000176" id="r_3253" name="ergosteryl ester hydrolase (18:1), lipid particle" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YKL140W OR YLL012W)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3253"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/16835446"/> <rdf:li rdf:resource="http://identifiers.org/pubmed/14640980"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3658" stoichiometry="1" constant="true"/> <speciesReference species="s_3657" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0669" stoichiometry="1" constant="true"/> <speciesReference species="s_2852" stoichiometry="1" constant="true"/> <speciesReference species="s_0798" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0578"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0613"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3254" sboTerm="SBO:0000176" id="r_3254" name="episteryl ester hydrolase (16:1), lipid particle" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YLL012W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3254"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/16835446"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3659" stoichiometry="1" constant="true"/> <speciesReference species="s_3657" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3660" stoichiometry="1" constant="true"/> <speciesReference species="s_2848" stoichiometry="1" constant="true"/> <speciesReference species="s_0798" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0613"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3255" sboTerm="SBO:0000176" id="r_3255" name="episteryl ester hydrolase (18:1), lipid particle" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YLL012W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3255"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/16835446"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3661" stoichiometry="1" constant="true"/> <speciesReference species="s_3657" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3660" stoichiometry="1" constant="true"/> <speciesReference species="s_2852" stoichiometry="1" constant="true"/> <speciesReference species="s_0798" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0613"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3256" sboTerm="SBO:0000176" id="r_3256" name="fecosteryl ester hydrolase (16:1), lipid particle" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YLL012W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3256"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/16835446"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3662" stoichiometry="1" constant="true"/> <speciesReference species="s_3657" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0703" stoichiometry="1" constant="true"/> <speciesReference species="s_2848" stoichiometry="1" constant="true"/> <speciesReference species="s_0798" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0613"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3257" sboTerm="SBO:0000176" id="r_3257" name="fecosteryl ester hydrolase (18:1), lipid particle" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YLL012W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3257"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/16835446"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3663" stoichiometry="1" constant="true"/> <speciesReference species="s_3657" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_0703" stoichiometry="1" constant="true"/> <speciesReference species="s_2852" stoichiometry="1" constant="true"/> <speciesReference species="s_0798" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0613"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3258" sboTerm="SBO:0000176" id="r_3258" name="lanosteryl ester hydrolase (16:1), lipid particle" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YLL012W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3258"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/16835446"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3664" stoichiometry="1" constant="true"/> <speciesReference species="s_3657" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3665" stoichiometry="1" constant="true"/> <speciesReference species="s_2848" stoichiometry="1" constant="true"/> <speciesReference species="s_0798" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0613"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3259" sboTerm="SBO:0000176" id="r_3259" name="lanosteryl ester hydrolase (18:1), lipid particle" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YLL012W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3259"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/16835446"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3666" stoichiometry="1" constant="true"/> <speciesReference species="s_3657" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3665" stoichiometry="1" constant="true"/> <speciesReference species="s_2852" stoichiometry="1" constant="true"/> <speciesReference species="s_0798" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0613"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3260" sboTerm="SBO:0000176" id="r_3260" name="zymosteryl ester hydrolase (16:1), lipid particle" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YLL012W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3260"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/16835446"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3667" stoichiometry="1" constant="true"/> <speciesReference species="s_3657" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1572" stoichiometry="1" constant="true"/> <speciesReference species="s_2848" stoichiometry="1" constant="true"/> <speciesReference species="s_0798" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0613"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3261" sboTerm="SBO:0000176" id="r_3261" name="zymosteryl ester hydrolase (18:1), lipid particle" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YLL012W</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3261"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/16835446"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3668" stoichiometry="1" constant="true"/> <speciesReference species="s_3657" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1572" stoichiometry="1" constant="true"/> <speciesReference species="s_2852" stoichiometry="1" constant="true"/> <speciesReference species="s_0798" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0613"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3262" sboTerm="SBO:0000176" id="r_3262" name="zymosteryl ester hydrolase (16:1), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YLR020C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3262"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/15632184"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3669" stoichiometry="1" constant="true"/> <speciesReference species="s_3449" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1568" stoichiometry="1" constant="true"/> <speciesReference species="s_3451" stoichiometry="1" constant="true"/> <speciesReference species="s_0793" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0628"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3263" sboTerm="SBO:0000176" id="r_3263" name="zymosteryl ester hydrolase (18:1), cell envelope" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YLR020C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3263"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/15632184"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3670" stoichiometry="1" constant="true"/> <speciesReference species="s_3449" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_1568" stoichiometry="1" constant="true"/> <speciesReference species="s_3459" stoichiometry="1" constant="true"/> <speciesReference species="s_0793" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0628"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3264" sboTerm="SBO:0000176" id="r_3264" name="TAG lipase (1-16:0, 2-16:1, 3-16:0), lipid particle" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YMR313C OR YKR089C OR YOR081C OR YBR204C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3264"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3044" stoichiometry="1" constant="true"/> <speciesReference species="s_3657" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3043" stoichiometry="1" constant="true"/> <speciesReference species="s_2846" stoichiometry="1" constant="true"/> <speciesReference species="s_0798" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0611"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_1045"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0765"/> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0851"/> </listOfModifiers> </reaction> <reaction metaid="meta_r_3265" sboTerm="SBO:0000176" id="r_3265" name="TAG lipase (1-16:0, 2-16:1, 3-16:1), lipid particle" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:(YMR313C OR YKR089C OR YOR081C OR YBR204C)</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3265"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3059" stoichiometry="1" constant="true"/> <speciesReference species="s_3657" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3043" stoichiometry="1" constant="true"/> <speciesReference species="s_2848" stoichiometry="1" constant="true"/> <speciesReference species="s_0798" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" 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sboTerm="SBO:0000176" id="r_3298" name="DAG lipase (1-18:0, 2-16:1), lipid particle" reversible="true" fast="false"> <notes> <body xmlns="http://www.w3.org/1999/xhtml"> <p>GENE_ASSOCIATION:YMR313C</p> </body> </notes> <annotation> <rdf:RDF> <rdf:Description rdf:about="#meta_r_3298"> <bqbiol:isDescribedBy> <rdf:Bag> <rdf:li rdf:resource="http://identifiers.org/pubmed/22345606"/> </rdf:Bag> </bqbiol:isDescribedBy> </rdf:Description> </rdf:RDF> </annotation> <listOfReactants> <speciesReference species="s_3051" stoichiometry="1" constant="true"/> <speciesReference species="s_3657" stoichiometry="1" constant="true"/> </listOfReactants> <listOfProducts> <speciesReference species="s_3673" stoichiometry="1" constant="true"/> <speciesReference species="s_2848" stoichiometry="1" constant="true"/> <speciesReference species="s_0798" stoichiometry="1" constant="true"/> </listOfProducts> <listOfModifiers> <modifierSpeciesReference sboTerm="SBO:0000460" species="e_0765"/> </listOfModifiers> 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